RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 AIFM3Q96NN9 605 aa13.9□□□□□ -0.18
CPSF7-218ENST00000537641 SLC4A9Q96Q91 983 aa13.9□□□□□ -0.18
CPSF7-218ENST00000537641 CDCA7Q9BWT1 371 aaPredicted RBP13.9□□□□□ -0.18
CPSF7-218ENST00000537641 TSPYL1Q9H0U9 437 aa13.9□□□□□ -0.18
CPSF7-218ENST00000537641 DOCK2Q92608 1830 aa13.9□□□□□ -0.18
CPSF7-218ENST00000537641 MYO5AQ9Y4I1 1855 aaKnown RBP13.9□□□□□ -0.18
CPSF7-218ENST00000537641 RREB1Q92766 1687 aa13.9□□□□□ -0.18
CPSF7-218ENST00000537641 ERVV-1B6SEH8 477 aa13.9□□□□□ -0.18
CPSF7-218ENST00000537641 TULP2O00295 520 aa13.9□□□□□ -0.18
CPSF7-218ENST00000537641 CDC27P30260 824 aa13.9□□□□□ -0.18
CPSF7-218ENST00000537641 PDE4BQ07343 736 aa13.9□□□□□ -0.18
CPSF7-218ENST00000537641 GPS2Q13227 327 aa13.9□□□□□ -0.18
CPSF7-218ENST00000537641 POSTNQ15063 836 aa13.9□□□□□ -0.18
CPSF7-218ENST00000537641 UBE3CQ15386 1083 aa13.9□□□□□ -0.18
CPSF7-218ENST00000537641 HLFQ16534 295 aa13.9□□□□□ -0.18
CPSF7-218ENST00000537641 MUM1L1Q5H9M0 696 aa13.9□□□□□ -0.18
CPSF7-218ENST00000537641 KANK3Q6NY19 840 aa13.9□□□□□ -0.18
CPSF7-218ENST00000537641 FOXP4Q8IVH2 680 aaPredicted RBP13.9□□□□□ -0.18
CPSF7-218ENST00000537641 ZNF579Q8NAF0 562 aaKnown RBP13.9□□□□□ -0.18
CPSF7-218ENST00000537641 CLIC6Q96NY7 704 aa13.9□□□□□ -0.18
CPSF7-218ENST00000537641 RAI14Q9P0K7 980 aa13.9□□□□□ -0.18
CPSF7-218ENST00000537641 UBN2Q6ZU65 1347 aa13.89□□□□□ -0.19
CPSF7-218ENST00000537641 LRP5O75197 1615 aa13.89□□□□□ -0.19
CPSF7-218ENST00000537641 POTEB2H3BUK9 544 aa13.89□□□□□ -0.19
CPSF7-218ENST00000537641 SEC31AO94979 1220 aaKnown RBP13.89□□□□□ -0.19
CPSF7-218ENST00000537641 FMNL1O95466 1100 aaPredicted RBP13.89□□□□□ -0.19
CPSF7-218ENST00000537641 BMP6P22004 513 aa13.89□□□□□ -0.19
CPSF7-218ENST00000537641 OAS2P29728 719 aaKnown RBP13.89□□□□□ -0.19
CPSF7-218ENST00000537641 IL6STP40189 918 aaPredicted RBP13.89□□□□□ -0.19
CPSF7-218ENST00000537641 LIFRP42702 1097 aa13.89□□□□□ -0.19
CPSF7-218ENST00000537641 SARSP49591 514 aaKnown RBP13.89□□□□□ -0.19
CPSF7-218ENST00000537641 CTSWP56202 376 aa13.89□□□□□ -0.19
CPSF7-218ENST00000537641 SLC20A2Q08357 652 aa13.89□□□□□ -0.19
CPSF7-218ENST00000537641 SSRP1Q08945 709 aaKnown RBP13.89□□□□□ -0.19
CPSF7-218ENST00000537641 TUBB2AQ13885 445 aa13.89□□□□□ -0.19
CPSF7-218ENST00000537641 MORC3Q14149 939 aa13.89□□□□□ -0.19
CPSF7-218ENST00000537641 BRD3Q15059 726 aa13.89□□□□□ -0.19
CPSF7-218ENST00000537641 ALX1Q15699 326 aa13.89□□□□□ -0.19
CPSF7-218ENST00000537641 NUTM2AQ8IVF1 878 aaPredicted RBP13.89□□□□□ -0.19
CPSF7-218ENST00000537641 PANX2Q96RD6 677 aa13.89□□□□□ -0.19
CPSF7-218ENST00000537641 TUBB2BQ9BVA1 445 aa13.89□□□□□ -0.19
CPSF7-218ENST00000537641 NAA15Q9BXJ9 866 aaKnown RBP13.89□□□□□ -0.19
CPSF7-218ENST00000537641 ARFGAP3Q9NP61 516 aa13.89□□□□□ -0.19
CPSF7-218ENST00000537641 ZBTB1Q9Y2K1 713 aa13.89□□□□□ -0.19
CPSF7-218ENST00000537641 NFE2L3Q9Y4A8 694 aa13.89□□□□□ -0.19
CPSF7-218ENST00000537641 PHLPP1O60346 1717 aa13.89□□□□□ -0.19
CPSF7-218ENST00000537641 PTPREP23469 700 aa13.88□□□□□ -0.19
CPSF7-218ENST00000537641 GPTP24298 496 aa13.88□□□□□ -0.19
CPSF7-218ENST00000537641 ERCC5P28715 1186 aaPredicted RBP13.88□□□□□ -0.19
CPSF7-218ENST00000537641 TUBB4BP68371 445 aa13.88□□□□□ -0.19
CPSF7-218ENST00000537641 GOLGA8FQ08AF8 430 aa13.88□□□□□ -0.19
CPSF7-218ENST00000537641 GOLGA8DPQ0D2H9 430 aa13.88□□□□□ -0.19
CPSF7-218ENST00000537641 SAFBQ15424 915 aaKnown RBP eCLIP13.88□□□□□ -0.19
CPSF7-218ENST00000537641 MICU3Q86XE3 530 aa13.88□□□□□ -0.19
CPSF7-218ENST00000537641 NOSTRINQ8IVI9 506 aa13.88□□□□□ -0.19
CPSF7-218ENST00000537641 TTLL11Q8NHH1 800 aa13.88□□□□□ -0.19
CPSF7-218ENST00000537641 PHKBQ93100 1093 aa13.88□□□□□ -0.19
CPSF7-218ENST00000537641 SMARCE1Q969G3 411 aa13.88□□□□□ -0.19
CPSF7-218ENST00000537641 WDR24Q96S15 920 aa13.88□□□□□ -0.19
CPSF7-218ENST00000537641 LY9Q9HBG7 655 aa13.88□□□□□ -0.19
CPSF7-218ENST00000537641 PSD3Q9NYI0 1048 aa13.88□□□□□ -0.19
CPSF7-218ENST00000537641 FBXO2Q9UK22 296 aaPredicted RBP13.88□□□□□ -0.19
CPSF7-218ENST00000537641 CCDC151A5D8V7 595 aa13.87□□□□□ -0.19
CPSF7-218ENST00000537641 RANBP6O60518 1105 aaKnown RBP13.87□□□□□ -0.19
CPSF7-218ENST00000537641 SASH3O75995 380 aa13.87□□□□□ -0.19
CPSF7-218ENST00000537641 IFNAR1P17181 557 aa13.87□□□□□ -0.19
CPSF7-218ENST00000537641 CDK11BP21127 795 aaKnown RBP13.87□□□□□ -0.19
CPSF7-218ENST00000537641 ITGA6P23229 1130 aa13.87□□□□□ -0.19
CPSF7-218ENST00000537641 PLCD1P51178 756 aa13.87□□□□□ -0.19
CPSF7-218ENST00000537641 SMC1AQ14683 1233 aaKnown RBP13.87□□□□□ -0.19
CPSF7-218ENST00000537641 RILPL1Q5EBL4 403 aa13.87□□□□□ -0.19
CPSF7-218ENST00000537641 TOGARAM2Q6ZUX3 1019 aa13.87□□□□□ -0.19
CPSF7-218ENST00000537641 STK11IPQ8N1F8 1099 aa13.87□□□□□ -0.19
CPSF7-218ENST00000537641 MSL3Q8N5Y2 521 aaKnown RBP13.87□□□□□ -0.19
CPSF7-218ENST00000537641 PDILTQ8N807 584 aa13.87□□□□□ -0.19
CPSF7-218ENST00000537641 IGDCC4Q8TDY8 1250 aa13.87□□□□□ -0.19
CPSF7-218ENST00000537641 CCDC34Q96HJ3 373 aa13.87□□□□□ -0.19
CPSF7-218ENST00000537641 FAM217BQ9NTX9 383 aaPredicted RBP13.87□□□□□ -0.19
CPSF7-218ENST00000537641 CEP131Q9UPN4 1083 aa13.87□□□□□ -0.19
CPSF7-218ENST00000537641 RIPOR2Q9Y4F9 1068 aa13.87□□□□□ -0.19
CPSF7-218ENST00000537641 A0A1B0GTH6 734 aa13.87□□□□□ -0.19
CPSF7-218ENST00000537641 ANKRD18BA2A2Z9 1011 aa13.87□□□□□ -0.19
CPSF7-218ENST00000537641 B4E1Z4 1266 aa13.87□□□□□ -0.19
CPSF7-218ENST00000537641 MMP1P03956 469 aa13.87□□□□□ -0.19
CPSF7-218ENST00000537641 CCDC175P0C221 793 aa13.87□□□□□ -0.19
CPSF7-218ENST00000537641 TXLNAP40222 546 aa13.87□□□□□ -0.19
CPSF7-218ENST00000537641 MCAMP43121 646 aa13.87□□□□□ -0.19
CPSF7-218ENST00000537641 HNRNPH2P55795 449 aaKnown RBP13.87□□□□□ -0.19
CPSF7-218ENST00000537641 IRX5P78411 483 aaPredicted RBP13.87□□□□□ -0.19
CPSF7-218ENST00000537641 NR1I3Q14994 352 aa13.87□□□□□ -0.19
CPSF7-218ENST00000537641 TMEM67Q5HYA8 995 aa13.87□□□□□ -0.19
CPSF7-218ENST00000537641 NFXL1Q6ZNB6 911 aa13.87□□□□□ -0.19
CPSF7-218ENST00000537641 DZIP3Q86Y13 1208 aaKnown RBP13.87□□□□□ -0.19
CPSF7-218ENST00000537641 CEP112Q8N8E3 955 aa13.87□□□□□ -0.19
CPSF7-218ENST00000537641 CCDC85AQ96PX6 553 aaPredicted RBP13.87□□□□□ -0.19
CPSF7-218ENST00000537641 MTA3Q9BTC8 594 aa13.87□□□□□ -0.19
CPSF7-218ENST00000537641 FOXP1Q9H334 677 aaPredicted RBP13.87□□□□□ -0.19
CPSF7-218ENST00000537641 TBC1D2BQ9UPU7 963 aa13.87□□□□□ -0.19
CPSF7-218ENST00000537641 THRAP3Q9Y2W1 955 aaKnown RBP13.87□□□□□ -0.19
CPSF7-218ENST00000537641 LAMB2P55268 1798 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms