RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 PRPF6O94906 941 aaKnown RBP17.77■□□□□ 0.44
CHFR-213ENST00000536843 MCMDC2Q4G0Z9 681 aa17.77■□□□□ 0.44
CHFR-213ENST00000536843 LRRC24Q50LG9 513 aa17.77■□□□□ 0.44
CHFR-213ENST00000536843 CTCFLQ8NI51 663 aaPredicted RBP17.77■□□□□ 0.44
CHFR-213ENST00000536843 KAT2BQ92831 832 aa17.77■□□□□ 0.44
CHFR-213ENST00000536843 LRRIQ3A6PVS8 624 aaPredicted RBP17.77■□□□□ 0.43
CHFR-213ENST00000536843 ISM2Q6H9L7 571 aa17.77■□□□□ 0.43
CHFR-213ENST00000536843 DESI2Q9BSY9 194 aa17.77■□□□□ 0.43
CHFR-213ENST00000536843 IRX2Q9BZI1 471 aaPredicted RBP17.77■□□□□ 0.43
CHFR-213ENST00000536843 PLEKHA4Q9H4M7 779 aa17.77■□□□□ 0.43
CHFR-213ENST00000536843 UBR2Q8IWV8 1755 aa17.76■□□□□ 0.43
CHFR-213ENST00000536843 SHOX2O60902 331 aaPredicted RBP17.76■□□□□ 0.43
CHFR-213ENST00000536843 USP8P40818 1118 aa17.76■□□□□ 0.43
CHFR-213ENST00000536843 IL15P40933 162 aaPredicted RBP17.76■□□□□ 0.43
CHFR-213ENST00000536843 PTPN21Q16825 1174 aa17.76■□□□□ 0.43
CHFR-213ENST00000536843 WDR93Q6P2C0 686 aa17.76■□□□□ 0.43
CHFR-213ENST00000536843 STOX1Q6ZVD7 989 aa17.76■□□□□ 0.43
CHFR-213ENST00000536843 PDILTQ8N807 584 aa17.76■□□□□ 0.43
CHFR-213ENST00000536843 KBTBD3Q8NAB2 608 aa17.76■□□□□ 0.43
CHFR-213ENST00000536843 COL22A1Q8NFW1 1626 aaPredicted RBP17.76■□□□□ 0.43
CHFR-213ENST00000536843 GOLIM4O00461 696 aa17.76■□□□□ 0.43
CHFR-213ENST00000536843 ADKP55263 362 aaKnown RBP17.76■□□□□ 0.43
CHFR-213ENST00000536843 CCT2P78371 535 aaKnown RBP17.76■□□□□ 0.43
CHFR-213ENST00000536843 EXOSC10Q01780 885 aaKnown RBP17.76■□□□□ 0.43
CHFR-213ENST00000536843 EYA2O00167 538 aa17.75■□□□□ 0.43
CHFR-213ENST00000536843 EXOC5O00471 708 aa17.75■□□□□ 0.43
CHFR-213ENST00000536843 KIF5CO60282 957 aa17.75■□□□□ 0.43
CHFR-213ENST00000536843 SYF2O95926 243 aaKnown RBP17.75■□□□□ 0.43
CHFR-213ENST00000536843 MYSM1Q5VVJ2 828 aa17.75■□□□□ 0.43
CHFR-213ENST00000536843 OLFM4Q6UX06 510 aa17.75■□□□□ 0.43
CHFR-213ENST00000536843 BRAPQ7Z569 592 aa17.75■□□□□ 0.43
CHFR-213ENST00000536843 ZNF274Q96GC6 653 aaPredicted RBP17.75■□□□□ 0.43
CHFR-213ENST00000536843 PUS3Q9BZE2 481 aaKnown RBP17.75■□□□□ 0.43
CHFR-213ENST00000536843 NCOA5Q9HCD5 579 aaKnown RBP17.75■□□□□ 0.43
CHFR-213ENST00000536843 GPR108Q9NPR9 543 aa17.75■□□□□ 0.43
CHFR-213ENST00000536843 ZNF330Q9Y3S2 320 aaPredicted RBP17.75■□□□□ 0.43
CHFR-213ENST00000536843 TNS2Q63HR2 1409 aa17.75■□□□□ 0.43
CHFR-213ENST00000536843 MROH7-TTC4A0A0A0MT08 1334 aa17.75■□□□□ 0.43
CHFR-213ENST00000536843 FDPSP14324 419 aaKnown RBP17.74■□□□□ 0.43
CHFR-213ENST00000536843 PAG1Q9NWQ8 432 aa17.74■□□□□ 0.43
CHFR-213ENST00000536843 NUP188Q5SRE5 1749 aa17.74■□□□□ 0.43
CHFR-213ENST00000536843 PHLPP1O60346 1717 aa17.74■□□□□ 0.43
CHFR-213ENST00000536843 RHOXF2BP0C7M4 288 aa17.74■□□□□ 0.43
CHFR-213ENST00000536843 HNRNPH1P31943 449 aaKnown RBP17.74■□□□□ 0.43
CHFR-213ENST00000536843 WHAMMP3Q1A5X7 153 aa17.74■□□□□ 0.43
CHFR-213ENST00000536843 PANX2Q96RD6 677 aa17.74■□□□□ 0.43
CHFR-213ENST00000536843 RHOXF2Q9BQY4 288 aa17.74■□□□□ 0.43
CHFR-213ENST00000536843 ISCA1Q9BUE6 129 aa17.74■□□□□ 0.43
CHFR-213ENST00000536843 TMOD3Q9NYL9 352 aa17.74■□□□□ 0.43
CHFR-213ENST00000536843 HPSEQ9Y251 543 aa17.74■□□□□ 0.43
CHFR-213ENST00000536843 ADGRG1Q9Y653 693 aa17.74■□□□□ 0.43
CHFR-213ENST00000536843 PDIA3P30101 505 aaKnown RBP17.73■□□□□ 0.43
CHFR-213ENST00000536843 PIP4K2BP78356 416 aa17.73■□□□□ 0.43
CHFR-213ENST00000536843 KCNV1Q6PIU1 500 aa17.73■□□□□ 0.43
CHFR-213ENST00000536843 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.73■□□□□ 0.43
CHFR-213ENST00000536843 TJP1Q07157 1748 aa17.73■□□□□ 0.43
CHFR-213ENST00000536843 LAMA4Q16363 1823 aa17.73■□□□□ 0.43
CHFR-213ENST00000536843 CTAGE15A4D2H0 777 aa17.73■□□□□ 0.43
CHFR-213ENST00000536843 CTAGE8P0CG41 777 aa17.73■□□□□ 0.43
CHFR-213ENST00000536843 SYKP43405 635 aa17.73■□□□□ 0.43
CHFR-213ENST00000536843 ANO1Q5XXA6 986 aa17.73■□□□□ 0.43
CHFR-213ENST00000536843 CTAGE6Q86UF2 777 aa17.73■□□□□ 0.43
CHFR-213ENST00000536843 CTAGE4Q8IX94 777 aa17.73■□□□□ 0.43
CHFR-213ENST00000536843 SUFUQ9UMX1 484 aa17.73■□□□□ 0.43
CHFR-213ENST00000536843 COL16A1Q07092 1604 aaPredicted RBP17.73■□□□□ 0.43
CHFR-213ENST00000536843 PAPPAQ13219 1627 aa17.73■□□□□ 0.43
CHFR-213ENST00000536843 CTAGE9A4FU28 777 aa17.72■□□□□ 0.43
CHFR-213ENST00000536843 UBAP1LF5GYI3 381 aa17.72■□□□□ 0.43
CHFR-213ENST00000536843 MNAT1P51948 309 aa17.72■□□□□ 0.43
CHFR-213ENST00000536843 TCIRG1Q13488 830 aa17.72■□□□□ 0.43
CHFR-213ENST00000536843 MTF1Q14872 753 aa17.72■□□□□ 0.43
CHFR-213ENST00000536843 NAA15Q9BXJ9 866 aaKnown RBP17.72■□□□□ 0.43
CHFR-213ENST00000536843 LZTFL1Q9NQ48 299 aa17.72■□□□□ 0.43
CHFR-213ENST00000536843 ASAP1Q9ULH1 1129 aa17.72■□□□□ 0.43
CHFR-213ENST00000536843 FAM237AA0A1B0GTK4 181 aa17.72■□□□□ 0.43
CHFR-213ENST00000536843 ZNF18P17022 549 aa17.72■□□□□ 0.43
CHFR-213ENST00000536843 BRD2P25440 801 aaKnown RBP17.72■□□□□ 0.43
CHFR-213ENST00000536843 KIF4BQ2VIQ3 1234 aa17.72■□□□□ 0.43
CHFR-213ENST00000536843 DNAJC10Q8IXB1 793 aa17.72■□□□□ 0.43
CHFR-213ENST00000536843 CLIC6Q96NY7 704 aa17.72■□□□□ 0.43
CHFR-213ENST00000536843 TACO1Q9BSH4 297 aaKnown RBP17.72■□□□□ 0.43
CHFR-213ENST00000536843 SH3TC1Q8TE82 1336 aa17.72■□□□□ 0.43
CHFR-213ENST00000536843 CDHR2Q9BYE9 1310 aa17.72■□□□□ 0.43
CHFR-213ENST00000536843 CIAO1O76071 339 aa17.71■□□□□ 0.43
CHFR-213ENST00000536843 POLR3DP05423 398 aaPredicted RBP17.71■□□□□ 0.43
CHFR-213ENST00000536843 LIG3P49916 1009 aa17.71■□□□□ 0.43
CHFR-213ENST00000536843 POTEDQ86YR6 584 aa17.71■□□□□ 0.43
CHFR-213ENST00000536843 PIGBQ92521 554 aa17.71■□□□□ 0.43
CHFR-213ENST00000536843 A1CFQ9NQ94 594 aaKnown RBP17.71■□□□□ 0.43
CHFR-213ENST00000536843 SHANK3Q9BYB0 1731 aa17.71■□□□□ 0.43
CHFR-213ENST00000536843 PNOCQ13519 176 aa17.71■□□□□ 0.43
CHFR-213ENST00000536843 SYNE3Q6ZMZ3 975 aa17.71■□□□□ 0.43
CHFR-213ENST00000536843 FAM169AQ9Y6X4 670 aa17.71■□□□□ 0.43
CHFR-213ENST00000536843 PALLDQ8WX93 1383 aa17.71■□□□□ 0.43
CHFR-213ENST00000536843 SOWAHDA6NJG2 315 aa17.7■□□□□ 0.42
CHFR-213ENST00000536843 IFIT1P09914 478 aaKnown RBP17.7■□□□□ 0.42
CHFR-213ENST00000536843 SLC39A14Q15043 492 aa17.7■□□□□ 0.42
CHFR-213ENST00000536843 ZNF569Q5MCW4 686 aa17.7■□□□□ 0.42
CHFR-213ENST00000536843 CNPY4Q8N129 248 aa17.7■□□□□ 0.42
CHFR-213ENST00000536843 IGSF22Q8N9C0 903 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms