RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 TIAM2Q8IVF5 1701 aa9.1□□□□□ -0.95
YBX3-206ENST00000536823 RNF123Q5XPI4 1314 aa9.09□□□□□ -0.95
YBX3-206ENST00000536823 CCDC88AQ3V6T2 1871 aa9.09□□□□□ -0.95
YBX3-206ENST00000536823 PRELPP51888 382 aa9.09□□□□□ -0.95
YBX3-206ENST00000536823 AIMP1Q12904 312 aaKnown RBP9.09□□□□□ -0.95
YBX3-206ENST00000536823 HSP90AB3PQ58FF7 597 aa9.09□□□□□ -0.95
YBX3-206ENST00000536823 SOGA3Q5TF21 947 aa9.09□□□□□ -0.95
YBX3-206ENST00000536823 SUSD4Q5VX71 490 aa9.09□□□□□ -0.95
YBX3-206ENST00000536823 PPP1R42Q7Z4L9 355 aa9.09□□□□□ -0.95
YBX3-206ENST00000536823 RAB6BQ9NRW1 208 aa9.09□□□□□ -0.95
YBX3-206ENST00000536823 DBF4Q9UBU7 674 aaPredicted RBP9.09□□□□□ -0.95
YBX3-206ENST00000536823 PCDHB9Q9Y5E1 797 aa9.09□□□□□ -0.95
YBX3-206ENST00000536823 DICER1Q9UPY3 1922 aaKnown RBP9.09□□□□□ -0.95
YBX3-206ENST00000536823 IL16Q14005 1332 aa9.08□□□□□ -0.96
YBX3-206ENST00000536823 BNIP3LO60238 219 aa9.08□□□□□ -0.96
YBX3-206ENST00000536823 SPATA31C1P0DKV0 1188 aa9.08□□□□□ -0.96
YBX3-206ENST00000536823 SCTRP47872 440 aa9.08□□□□□ -0.96
YBX3-206ENST00000536823 CCDC93Q567U6 631 aa9.08□□□□□ -0.96
YBX3-206ENST00000536823 WWC1Q8IX03 1113 aa9.08□□□□□ -0.96
YBX3-206ENST00000536823 C7orf43Q8WVR3 580 aa9.08□□□□□ -0.96
YBX3-206ENST00000536823 HYPKQ9NX55 129 aa9.08□□□□□ -0.96
YBX3-206ENST00000536823 A6NJR5 290 aa9.07□□□□□ -0.96
YBX3-206ENST00000536823 DYRK3O43781 588 aa9.07□□□□□ -0.96
YBX3-206ENST00000536823 HOXA10P31260 410 aaPredicted RBP9.07□□□□□ -0.96
YBX3-206ENST00000536823 TCIRG1Q13488 830 aa9.07□□□□□ -0.96
YBX3-206ENST00000536823 NLRP10Q86W26 655 aa9.07□□□□□ -0.96
YBX3-206ENST00000536823 C8orf58Q8NAV2 365 aa9.07□□□□□ -0.96
YBX3-206ENST00000536823 PLBD2Q8NHP8 589 aa9.07□□□□□ -0.96
YBX3-206ENST00000536823 UTP14AQ9BVJ6 771 aaKnown RBP9.07□□□□□ -0.96
YBX3-206ENST00000536823 TAOK3Q9H2K8 898 aa9.07□□□□□ -0.96
YBX3-206ENST00000536823 OSBPL3Q9H4L5 887 aa9.07□□□□□ -0.96
YBX3-206ENST00000536823 NMRK2Q9NPI5 230 aa9.07□□□□□ -0.96
YBX3-206ENST00000536823 TPSG1Q9NRR2 321 aa9.07□□□□□ -0.96
YBX3-206ENST00000536823 NDFIP2Q9NV92 336 aa9.07□□□□□ -0.96
YBX3-206ENST00000536823 KDM2BQ8NHM5 1336 aa9.06□□□□□ -0.96
YBX3-206ENST00000536823 SNED1Q8TER0 1413 aa9.06□□□□□ -0.96
YBX3-206ENST00000536823 ELL2O00472 640 aaPredicted RBP9.06□□□□□ -0.96
YBX3-206ENST00000536823 TRAK2O60296 914 aa9.06□□□□□ -0.96
YBX3-206ENST00000536823 ALDH1B1P30837 517 aa9.06□□□□□ -0.96
YBX3-206ENST00000536823 CENPCQ03188 943 aa9.06□□□□□ -0.96
YBX3-206ENST00000536823 RNF20Q5VTR2 975 aa9.06□□□□□ -0.96
YBX3-206ENST00000536823 RPGRQ92834 1020 aaKnown RBP9.06□□□□□ -0.96
YBX3-206ENST00000536823 TSR2Q969E8 191 aaKnown RBP9.06□□□□□ -0.96
YBX3-206ENST00000536823 TRIM11Q96F44 468 aa9.06□□□□□ -0.96
YBX3-206ENST00000536823 ZSCAN10Q96SZ4 725 aaPredicted RBP9.06□□□□□ -0.96
YBX3-206ENST00000536823 CHMP4AQ9BY43 222 aa9.06□□□□□ -0.96
YBX3-206ENST00000536823 GOLGA2P5Q9HBQ8 144 aa9.06□□□□□ -0.96
YBX3-206ENST00000536823 LAMB2P55268 1798 aa9.06□□□□□ -0.96
YBX3-206ENST00000536823 MSX1P28360 303 aa9.05□□□□□ -0.96
YBX3-206ENST00000536823 FKBP4Q02790 459 aaKnown RBP eCLIP9.05□□□□□ -0.96
YBX3-206ENST00000536823 GNASQ5JWF2 1037 aa9.05□□□□□ -0.96
YBX3-206ENST00000536823 SLC10A5Q5PT55 438 aa9.05□□□□□ -0.96
YBX3-206ENST00000536823 CCDC30Q5VVM6 783 aa9.05□□□□□ -0.96
YBX3-206ENST00000536823 OLFM4Q6UX06 510 aa9.05□□□□□ -0.96
YBX3-206ENST00000536823 RTKN2Q8IZC4 609 aa9.05□□□□□ -0.96
YBX3-206ENST00000536823 TSPYL6Q8N831 410 aa9.05□□□□□ -0.96
YBX3-206ENST00000536823 CRAMP1Q96RY5 1269 aa9.05□□□□□ -0.96
YBX3-206ENST00000536823 ESYT1Q9BSJ8 1104 aa9.05□□□□□ -0.96
YBX3-206ENST00000536823 ISCA1Q9BUE6 129 aa9.05□□□□□ -0.96
YBX3-206ENST00000536823 PLVAPQ9BX97 442 aa9.05□□□□□ -0.96
YBX3-206ENST00000536823 TRMT112Q9UI30 125 aaKnown RBP9.05□□□□□ -0.96
YBX3-206ENST00000536823 SH3TC1Q8TE82 1336 aa9.05□□□□□ -0.96
YBX3-206ENST00000536823 GLTPD2A6NH11 291 aa9.04□□□□□ -0.96
YBX3-206ENST00000536823 USP17L8P0C7I0 530 aa9.04□□□□□ -0.96
YBX3-206ENST00000536823 TRIM28Q13263 835 aaKnown RBP9.04□□□□□ -0.96
YBX3-206ENST00000536823 WDR63Q8IWG1 891 aa9.04□□□□□ -0.96
YBX3-206ENST00000536823 RBM17Q96I25 401 aaKnown RBP9.04□□□□□ -0.96
YBX3-206ENST00000536823 PHAXQ9H814 394 aaKnown RBP9.04□□□□□ -0.96
YBX3-206ENST00000536823 SNRKQ9NRH2 765 aa9.04□□□□□ -0.96
YBX3-206ENST00000536823 DDX60Q8IY21 1712 aaKnown RBP9.04□□□□□ -0.96
YBX3-206ENST00000536823 FANCIQ9NVI1 1328 aa9.04□□□□□ -0.96
YBX3-206ENST00000536823 WDR90Q96KV7 1748 aa9.03□□□□□ -0.96
YBX3-206ENST00000536823 CACNA1FO60840 1977 aa9.03□□□□□ -0.96
YBX3-206ENST00000536823 TOMM70O94826 608 aa9.03□□□□□ -0.96
YBX3-206ENST00000536823 IL2RAP01589 272 aa9.03□□□□□ -0.96
YBX3-206ENST00000536823 HCLS1P14317 486 aaPredicted RBP9.03□□□□□ -0.96
YBX3-206ENST00000536823 TWISTNBQ3B726 338 aaPredicted RBP9.03□□□□□ -0.96
YBX3-206ENST00000536823 FAM9BQ8IZU0 186 aa9.03□□□□□ -0.96
YBX3-206ENST00000536823 SYNE4Q8N205 404 aa9.03□□□□□ -0.96
YBX3-206ENST00000536823 PSMD1Q99460 953 aa9.03□□□□□ -0.96
YBX3-206ENST00000536823 ZNF277Q9NRM2 450 aaPredicted RBP9.03□□□□□ -0.96
YBX3-206ENST00000536823 PCDHB11Q9Y5F2 797 aa9.03□□□□□ -0.96
YBX3-206ENST00000536823 ABCC4O15439 1325 aa9.03□□□□□ -0.96
YBX3-206ENST00000536823 ZBBXA8MT70 800 aa9.02□□□□□ -0.97
YBX3-206ENST00000536823 DDX58O95786 925 aaKnown RBP9.02□□□□□ -0.97
YBX3-206ENST00000536823 C4orf17Q53FE4 359 aa9.02□□□□□ -0.97
YBX3-206ENST00000536823 PRSS36Q5K4E3 855 aa9.02□□□□□ -0.97
YBX3-206ENST00000536823 TMEM214Q6NUQ4 689 aaKnown RBP9.02□□□□□ -0.97
YBX3-206ENST00000536823 SLC51AQ86UW1 340 aa9.02□□□□□ -0.97
YBX3-206ENST00000536823 C16orf71Q8IYS4 520 aaPredicted RBP9.02□□□□□ -0.97
YBX3-206ENST00000536823 MTMR14Q8NCE2 650 aa9.02□□□□□ -0.97
YBX3-206ENST00000536823 STK31Q9BXU1 1019 aa9.02□□□□□ -0.97
YBX3-206ENST00000536823 LRRC37AA6NMS7 1700 aa9.01□□□□□ -0.97
YBX3-206ENST00000536823 GNRH1P01148 92 aa9.01□□□□□ -0.97
YBX3-206ENST00000536823 VEGFAP15692 232 aaPredicted RBP9.01□□□□□ -0.97
YBX3-206ENST00000536823 HSPA6P17066 643 aa9.01□□□□□ -0.97
YBX3-206ENST00000536823 ADH6P28332 368 aa9.01□□□□□ -0.97
YBX3-206ENST00000536823 IARSP41252 1262 aaKnown RBP9.01□□□□□ -0.97
YBX3-206ENST00000536823 DDX46Q7L014 1031 aaKnown RBP9.01□□□□□ -0.97
YBX3-206ENST00000536823 ZNF428Q96B54 188 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms