RNA–Protein interactions for RNA: ENST00000536805.5

PTCD2-211, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 1,911 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-211ENST00000536805 FBXO2Q9UK22 296 aaPredicted RBP13.83□□□□□ -0.2
PTCD2-211ENST00000536805 MAP2K7O14733 419 aa13.82□□□□□ -0.2
PTCD2-211ENST00000536805 ADKP55263 362 aaKnown RBP13.82□□□□□ -0.2
PTCD2-211ENST00000536805 SSRP1Q08945 709 aaKnown RBP13.82□□□□□ -0.2
PTCD2-211ENST00000536805 TRIM28Q13263 835 aaKnown RBP13.82□□□□□ -0.2
PTCD2-211ENST00000536805 SAFBQ15424 915 aaKnown RBP eCLIP13.82□□□□□ -0.2
PTCD2-211ENST00000536805 ALX1Q15699 326 aa13.82□□□□□ -0.2
PTCD2-211ENST00000536805 NEK11Q8NG66 645 aa13.82□□□□□ -0.2
PTCD2-211ENST00000536805 CCDC12Q8WUD4 166 aaPredicted RBP13.82□□□□□ -0.2
PTCD2-211ENST00000536805 AK7Q96M32 723 aa13.82□□□□□ -0.2
PTCD2-211ENST00000536805 CHD4Q14839 1912 aa13.82□□□□□ -0.2
PTCD2-211ENST00000536805 WDR17Q8IZU2 1322 aa13.82□□□□□ -0.2
PTCD2-211ENST00000536805 AKR1B15C9JRZ8 316 aaPredicted RBP13.82□□□□□ -0.2
PTCD2-211ENST00000536805 FOXN1O15353 648 aa13.82□□□□□ -0.2
PTCD2-211ENST00000536805 MMP1P03956 469 aa13.82□□□□□ -0.2
PTCD2-211ENST00000536805 CSF1RP07333 972 aa13.82□□□□□ -0.2
PTCD2-211ENST00000536805 IFNAR1P17181 557 aa13.82□□□□□ -0.2
PTCD2-211ENST00000536805 LONRF2Q1L5Z9 754 aa13.82□□□□□ -0.2
PTCD2-211ENST00000536805 RILPL1Q5EBL4 403 aa13.82□□□□□ -0.2
PTCD2-211ENST00000536805 NFXL1Q6ZNB6 911 aa13.82□□□□□ -0.2
PTCD2-211ENST00000536805 SRGAP1Q7Z6B7 1085 aa13.82□□□□□ -0.2
PTCD2-211ENST00000536805 CEP112Q8N8E3 955 aa13.82□□□□□ -0.2
PTCD2-211ENST00000536805 SPATA20Q8TB22 786 aa13.82□□□□□ -0.2
PTCD2-211ENST00000536805 BBXQ8WY36 941 aaPredicted RBP13.82□□□□□ -0.2
PTCD2-211ENST00000536805 EPC1Q9H2F5 836 aa13.82□□□□□ -0.2
PTCD2-211ENST00000536805 FOXP1Q9H334 677 aaPredicted RBP13.82□□□□□ -0.2
PTCD2-211ENST00000536805 TBC1D2BQ9UPU7 963 aa13.82□□□□□ -0.2
PTCD2-211ENST00000536805 TNS2Q63HR2 1409 aa13.81□□□□□ -0.2
PTCD2-211ENST00000536805 B4E1Z4 1266 aa13.81□□□□□ -0.2
PTCD2-211ENST00000536805 PCCAP05165 728 aaPredicted RBP13.81□□□□□ -0.2
PTCD2-211ENST00000536805 CAPN2P17655 700 aa13.81□□□□□ -0.2
PTCD2-211ENST00000536805 RXRAP19793 462 aa13.81□□□□□ -0.2
PTCD2-211ENST00000536805 MCAMP43121 646 aa13.81□□□□□ -0.2
PTCD2-211ENST00000536805 CHMP4BP1P59074 171 aa13.81□□□□□ -0.2
PTCD2-211ENST00000536805 ST5P78524 1137 aa13.81□□□□□ -0.2
PTCD2-211ENST00000536805 RAD51AP2Q09MP3 1159 aa13.81□□□□□ -0.2
PTCD2-211ENST00000536805 PTPN21Q16825 1174 aa13.81□□□□□ -0.2
PTCD2-211ENST00000536805 TAF7LQ5H9L4 462 aa13.81□□□□□ -0.2
PTCD2-211ENST00000536805 TMEM67Q5HYA8 995 aa13.81□□□□□ -0.2
PTCD2-211ENST00000536805 MRPL44Q9H9J2 332 aaKnown RBP13.81□□□□□ -0.2
PTCD2-211ENST00000536805 SERTAD1Q9UHV2 236 aa13.81□□□□□ -0.2
PTCD2-211ENST00000536805 DENND2AQ9ULE3 1009 aa13.81□□□□□ -0.2
PTCD2-211ENST00000536805 MYO5AQ9Y4I1 1855 aaKnown RBP13.8□□□□□ -0.2
PTCD2-211ENST00000536805 ERVV-2B6SEH9 535 aa13.8□□□□□ -0.2
PTCD2-211ENST00000536805 ZBTB22O15209 634 aa13.8□□□□□ -0.2
PTCD2-211ENST00000536805 ACTN4O43707 911 aaKnown RBP13.8□□□□□ -0.2
PTCD2-211ENST00000536805 A1BGP04217 495 aa13.8□□□□□ -0.2
PTCD2-211ENST00000536805 PRR29P0C7W0 189 aa13.8□□□□□ -0.2
PTCD2-211ENST00000536805 USP5P45974 858 aa13.8□□□□□ -0.2
PTCD2-211ENST00000536805 TOB1P50616 345 aaPredicted RBP13.8□□□□□ -0.2
PTCD2-211ENST00000536805 IFIT5Q13325 482 aaKnown RBP13.8□□□□□ -0.2
PTCD2-211ENST00000536805 TCIRG1Q13488 830 aa13.8□□□□□ -0.2
PTCD2-211ENST00000536805 SLC9C2Q5TAH2 1124 aa13.8□□□□□ -0.2
PTCD2-211ENST00000536805 PI16Q6UXB8 463 aa13.8□□□□□ -0.2
PTCD2-211ENST00000536805 MSANTD4Q8NCY6 345 aa13.8□□□□□ -0.2
PTCD2-211ENST00000536805 CCDC34Q96HJ3 373 aa13.8□□□□□ -0.2
PTCD2-211ENST00000536805 SLC26A6Q9BXS9 759 aa13.8□□□□□ -0.2
PTCD2-211ENST00000536805 SENP2Q9HC62 589 aa13.8□□□□□ -0.2
PTCD2-211ENST00000536805 RAB21Q9UL25 225 aa13.8□□□□□ -0.2
PTCD2-211ENST00000536805 CEP131Q9UPN4 1083 aa13.8□□□□□ -0.2
PTCD2-211ENST00000536805 SEMA3EO15041 775 aa13.8□□□□□ -0.2
PTCD2-211ENST00000536805 POLR2DO15514 142 aaKnown RBP13.8□□□□□ -0.2
PTCD2-211ENST00000536805 KARSQ15046 597 aaKnown RBP13.8□□□□□ -0.2
PTCD2-211ENST00000536805 IQUBQ8NA54 791 aa13.8□□□□□ -0.2
PTCD2-211ENST00000536805 NKX2-3Q8TAU0 364 aa13.8□□□□□ -0.2
PTCD2-211ENST00000536805 DESI2Q9BSY9 194 aa13.8□□□□□ -0.2
PTCD2-211ENST00000536805 CWC15Q9P013 229 aaKnown RBP13.8□□□□□ -0.2
PTCD2-211ENST00000536805 CDC23Q9UJX2 597 aa13.8□□□□□ -0.2
PTCD2-211ENST00000536805 SRPRBQ9Y5M8 271 aaKnown RBP13.8□□□□□ -0.2
PTCD2-211ENST00000536805 ADGRG1Q9Y653 693 aa13.8□□□□□ -0.2
PTCD2-211ENST00000536805 SLC12A7Q9Y666 1083 aa13.8□□□□□ -0.2
PTCD2-211ENST00000536805 PCDH11XQ9BZA7 1347 aa13.79□□□□□ -0.2
PTCD2-211ENST00000536805 PCDH11YQ9BZA8 1340 aa13.79□□□□□ -0.2
PTCD2-211ENST00000536805 KIF5CO60282 957 aa13.79□□□□□ -0.2
PTCD2-211ENST00000536805 FECHP22830 423 aa13.79□□□□□ -0.2
PTCD2-211ENST00000536805 PBX1P40424 430 aa13.79□□□□□ -0.2
PTCD2-211ENST00000536805 APTXQ7Z2E3 356 aaKnown RBP13.79□□□□□ -0.2
PTCD2-211ENST00000536805 DIS3L2Q8IYB7 885 aaKnown RBP13.79□□□□□ -0.2
PTCD2-211ENST00000536805 TRMT44Q8IYL2 757 aaKnown RBP13.79□□□□□ -0.2
PTCD2-211ENST00000536805 GOLGA5Q8TBA6 731 aa13.79□□□□□ -0.2
PTCD2-211ENST00000536805 CCDC51Q96ER9 411 aa13.79□□□□□ -0.2
PTCD2-211ENST00000536805 MED15Q96RN5 788 aa13.79□□□□□ -0.2
PTCD2-211ENST00000536805 TEX13AQ9BXU3 409 aaPredicted RBP13.79□□□□□ -0.2
PTCD2-211ENST00000536805 CNNM2Q9H8M5 875 aa13.79□□□□□ -0.2
PTCD2-211ENST00000536805 ARAP2Q8WZ64 1704 aa13.79□□□□□ -0.2
PTCD2-211ENST00000536805 BTBD18B2RXH4 712 aa13.78□□□□□ -0.2
PTCD2-211ENST00000536805 ERLIN1O75477 346 aa13.78□□□□□ -0.2
PTCD2-211ENST00000536805 RCAN1P53805 252 aa13.78□□□□□ -0.2
PTCD2-211ENST00000536805 ZSCAN26Q16670 478 aa13.78□□□□□ -0.2
PTCD2-211ENST00000536805 HSP90AA4PQ58FG1 418 aa13.78□□□□□ -0.2
PTCD2-211ENST00000536805 METTL24Q5JXM2 366 aa13.78□□□□□ -0.2
PTCD2-211ENST00000536805 SPATA1Q5VX52 437 aa13.78□□□□□ -0.2
PTCD2-211ENST00000536805 RASGRP2Q7LDG7 609 aa13.78□□□□□ -0.2
PTCD2-211ENST00000536805 PPFIBP1Q86W92 1011 aa13.78□□□□□ -0.2
PTCD2-211ENST00000536805 TRIM22Q8IYM9 498 aa13.78□□□□□ -0.2
PTCD2-211ENST00000536805 CTAGE1Q96RT6 745 aa13.78□□□□□ -0.2
PTCD2-211ENST00000536805 MTA3Q9BTC8 594 aa13.78□□□□□ -0.2
PTCD2-211ENST00000536805 SAMSN1Q9NSI8 373 aaKnown RBP13.78□□□□□ -0.2
PTCD2-211ENST00000536805 RIPOR2Q9Y4F9 1068 aa13.78□□□□□ -0.2
PTCD2-211ENST00000536805 ITIH6Q6UXX5 1313 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms