RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 CCDC158Q5M9N0 1113 aa15.25■□□□□ 0.03
PRKDC-207ENST00000536483 C20orf194Q5TEA3 1177 aa15.25■□□□□ 0.03
PRKDC-207ENST00000536483 ERICH6Q7L0X2 663 aa15.25■□□□□ 0.03
PRKDC-207ENST00000536483 NKX2-3Q8TAU0 364 aa15.25■□□□□ 0.03
PRKDC-207ENST00000536483 ZNF384Q8TF68 577 aa15.25■□□□□ 0.03
PRKDC-207ENST00000536483 DBNDD2Q9BQY9 259 aa15.25■□□□□ 0.03
PRKDC-207ENST00000536483 RNF208Q9H0X6 261 aa15.25■□□□□ 0.03
PRKDC-207ENST00000536483 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.25■□□□□ 0.03
PRKDC-207ENST00000536483 DBNLQ9UJU6 430 aaKnown RBP15.25■□□□□ 0.03
PRKDC-207ENST00000536483 GABRQQ9UN88 632 aa15.25■□□□□ 0.03
PRKDC-207ENST00000536483 TRIM75PA6NK02 468 aa15.24■□□□□ 0.03
PRKDC-207ENST00000536483 CTNND1O60716 968 aaKnown RBP15.24■□□□□ 0.03
PRKDC-207ENST00000536483 GJB1P08034 283 aa15.24■□□□□ 0.03
PRKDC-207ENST00000536483 GJA8P48165 433 aa15.24■□□□□ 0.03
PRKDC-207ENST00000536483 RHBDL3P58872 404 aa15.24■□□□□ 0.03
PRKDC-207ENST00000536483 UBXN2AP68543 259 aa15.24■□□□□ 0.03
PRKDC-207ENST00000536483 MECOMQ03112 1051 aa15.24■□□□□ 0.03
PRKDC-207ENST00000536483 CCDC84Q86UT8 332 aaPredicted RBP15.24■□□□□ 0.03
PRKDC-207ENST00000536483 DPF3Q92784 378 aa15.24■□□□□ 0.03
PRKDC-207ENST00000536483 NSUN4Q96CB9 384 aaKnown RBP15.24■□□□□ 0.03
PRKDC-207ENST00000536483 DOCK2Q92608 1830 aa15.24■□□□□ 0.03
PRKDC-207ENST00000536483 RAB11FIP3O75154 756 aa15.23■□□□□ 0.03
PRKDC-207ENST00000536483 TMED8Q6PL24 325 aaPredicted RBP15.23■□□□□ 0.03
PRKDC-207ENST00000536483 PI16Q6UXB8 463 aa15.23■□□□□ 0.03
PRKDC-207ENST00000536483 SLAIN1Q8ND83 568 aa15.23■□□□□ 0.03
PRKDC-207ENST00000536483 RHPN1Q8TCX5 695 aa15.23■□□□□ 0.03
PRKDC-207ENST00000536483 SLC45A1Q9Y2W3 748 aa15.23■□□□□ 0.03
PRKDC-207ENST00000536483 SZT2Q5T011 3432 aa15.23■□□□□ 0.03
PRKDC-207ENST00000536483 TRIOBPQ9H2D6 2365 aa15.22■□□□□ 0.03
PRKDC-207ENST00000536483 RANBP2P49792 3224 aaKnown RBP15.22■□□□□ 0.03
PRKDC-207ENST00000536483 FAM196BA6NMK8 535 aa15.22■□□□□ 0.03
PRKDC-207ENST00000536483 LDHCP07864 332 aa15.22■□□□□ 0.03
PRKDC-207ENST00000536483 FLT3LGP49771 235 aa15.22■□□□□ 0.03
PRKDC-207ENST00000536483 GSTO1P78417 241 aa15.22■□□□□ 0.03
PRKDC-207ENST00000536483 TBC1D9Q6ZT07 1266 aa15.22■□□□□ 0.03
PRKDC-207ENST00000536483 SMCR8Q8TEV9 937 aaPredicted RBP15.22■□□□□ 0.03
PRKDC-207ENST00000536483 KIF1BPQ96EK5 621 aa15.22■□□□□ 0.03
PRKDC-207ENST00000536483 EXOC6BQ9Y2D4 811 aa15.22■□□□□ 0.03
PRKDC-207ENST00000536483 TNPO2O14787 897 aaKnown RBP15.21■□□□□ 0.03
PRKDC-207ENST00000536483 ADCY3O60266 1144 aa15.21■□□□□ 0.03
PRKDC-207ENST00000536483 TBC1D12O60347 775 aa15.21■□□□□ 0.03
PRKDC-207ENST00000536483 CYP2E1P05181 493 aaPredicted RBP15.21■□□□□ 0.03
PRKDC-207ENST00000536483 TTC39AQ5SRH9 613 aa15.21■□□□□ 0.03
PRKDC-207ENST00000536483 CHRDL2Q6WN34 429 aa15.21■□□□□ 0.03
PRKDC-207ENST00000536483 UBE2Q1Q7Z7E8 422 aa15.21■□□□□ 0.03
PRKDC-207ENST00000536483 U2AF1L4Q8WU68 220 aaKnown RBP15.21■□□□□ 0.03
PRKDC-207ENST00000536483 UNC93B1Q9H1C4 597 aa15.21■□□□□ 0.03
PRKDC-207ENST00000536483 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.21■□□□□ 0.03
PRKDC-207ENST00000536483 CENPBP07199 599 aaPredicted RBP15.2■□□□□ 0.02
PRKDC-207ENST00000536483 ELNP15502 786 aa15.2■□□□□ 0.02
PRKDC-207ENST00000536483 PPP4CP60510 307 aa15.2■□□□□ 0.02
PRKDC-207ENST00000536483 TREML2Q5T2D2 321 aa15.2■□□□□ 0.02
PRKDC-207ENST00000536483 ANKRD13CQ8N6S4 541 aa15.2■□□□□ 0.02
PRKDC-207ENST00000536483 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.2■□□□□ 0.02
PRKDC-207ENST00000536483 HTATIP2Q9BUP3 242 aa15.2■□□□□ 0.02
PRKDC-207ENST00000536483 CCDC8Q9H0W5 538 aaPredicted RBP15.2■□□□□ 0.02
PRKDC-207ENST00000536483 TLR7Q9NYK1 1049 aaKnown RBP15.2■□□□□ 0.02
PRKDC-207ENST00000536483 RAI14Q9P0K7 980 aa15.2■□□□□ 0.02
PRKDC-207ENST00000536483 AGTPBP1Q9UPW5 1226 aa15.2■□□□□ 0.02
PRKDC-207ENST00000536483 MGAMO43451 1857 aa15.19■□□□□ 0.02
PRKDC-207ENST00000536483 DOCK1Q14185 1865 aa15.19■□□□□ 0.02
PRKDC-207ENST00000536483 SGPL1O95470 568 aa15.19■□□□□ 0.02
PRKDC-207ENST00000536483 INHAP05111 366 aa15.19■□□□□ 0.02
PRKDC-207ENST00000536483 SPP2Q13103 211 aa15.19■□□□□ 0.02
PRKDC-207ENST00000536483 PHIPQ8WWQ0 1821 aa15.19■□□□□ 0.02
PRKDC-207ENST00000536483 PTPRFP10586 1907 aa15.18■□□□□ 0.02
PRKDC-207ENST00000536483 FARP2O94887 1054 aaPredicted RBP15.18■□□□□ 0.02
PRKDC-207ENST00000536483 ZAP70P43403 619 aa15.18■□□□□ 0.02
PRKDC-207ENST00000536483 IRF5Q13568 498 aa15.18■□□□□ 0.02
PRKDC-207ENST00000536483 RRP1BQ14684 758 aaKnown RBP15.18■□□□□ 0.02
PRKDC-207ENST00000536483 CLASRPQ8N2M8 674 aaKnown RBP15.18■□□□□ 0.02
PRKDC-207ENST00000536483 PXYLP1Q8TE99 480 aa15.18■□□□□ 0.02
PRKDC-207ENST00000536483 OSBPL5Q9H0X9 879 aaPredicted RBP15.18■□□□□ 0.02
PRKDC-207ENST00000536483 LRP2BPQ9P2M1 347 aa15.18■□□□□ 0.02
PRKDC-207ENST00000536483 RBM27Q9P2N5 1060 aaKnown RBP15.18■□□□□ 0.02
PRKDC-207ENST00000536483 TAOK2Q9UL54 1235 aa15.18■□□□□ 0.02
PRKDC-207ENST00000536483 COL2A1P02458 1487 aaPredicted RBP15.18■□□□□ 0.02
PRKDC-207ENST00000536483 CAP2P40123 477 aa15.17■□□□□ 0.02
PRKDC-207ENST00000536483 AACSQ86V21 672 aa15.17■□□□□ 0.02
PRKDC-207ENST00000536483 TEX11Q8IYF3 940 aa15.17■□□□□ 0.02
PRKDC-207ENST00000536483 PROCA1Q8NCQ7 364 aaPredicted RBP15.17■□□□□ 0.02
PRKDC-207ENST00000536483 ZNF280CQ8ND82 737 aa15.17■□□□□ 0.02
PRKDC-207ENST00000536483 COA7Q96BR5 231 aa15.17■□□□□ 0.02
PRKDC-207ENST00000536483 DEFB118Q96PH6 123 aa15.17■□□□□ 0.02
PRKDC-207ENST00000536483 SNRKQ9NRH2 765 aa15.17■□□□□ 0.02
PRKDC-207ENST00000536483 PNMA3Q9UL41 463 aa15.17■□□□□ 0.02
PRKDC-207ENST00000536483 TFRCP02786 760 aaKnown RBP15.16■□□□□ 0.02
PRKDC-207ENST00000536483 HMGCS2P54868 508 aa15.16■□□□□ 0.02
PRKDC-207ENST00000536483 RRP1P56182 461 aaKnown RBP15.16■□□□□ 0.02
PRKDC-207ENST00000536483 FAM110CQ1W6H9 321 aa15.16■□□□□ 0.02
PRKDC-207ENST00000536483 SH3RF3Q8TEJ3 882 aaPredicted RBP15.16■□□□□ 0.02
PRKDC-207ENST00000536483 DCTPP1Q9H773 170 aa15.16■□□□□ 0.02
PRKDC-207ENST00000536483 IL1RAPL2Q9NP60 686 aa15.16■□□□□ 0.02
PRKDC-207ENST00000536483 PIH1D3Q9NQM4 214 aaKnown RBP15.16■□□□□ 0.02
PRKDC-207ENST00000536483 USP17L5A8MUK1 530 aa15.15■□□□□ 0.02
PRKDC-207ENST00000536483 BAG3O95817 575 aa15.15■□□□□ 0.02
PRKDC-207ENST00000536483 PLCG2P16885 1265 aa15.15■□□□□ 0.02
PRKDC-207ENST00000536483 NAA16Q6N069 864 aaPredicted RBP15.15■□□□□ 0.02
PRKDC-207ENST00000536483 CERS3Q8IU89 383 aa15.15■□□□□ 0.02
PRKDC-207ENST00000536483 AATFQ9NY61 560 aaKnown RBP eCLIP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms