RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 MOGSQ13724 837 aa15.94■□□□□ 0.14
PRKDC-206ENST00000536429 TMED8Q6PL24 325 aaPredicted RBP15.94■□□□□ 0.14
PRKDC-206ENST00000536429 ZNF296Q8WUU4 475 aaPredicted RBP15.94■□□□□ 0.14
PRKDC-206ENST00000536429 GPATCH3Q96I76 525 aa15.94■□□□□ 0.14
PRKDC-206ENST00000536429 CFHR5Q9BXR6 569 aa15.94■□□□□ 0.14
PRKDC-206ENST00000536429 DHX36Q9H2U1 1008 aaKnown RBP15.94■□□□□ 0.14
PRKDC-206ENST00000536429 ARMT1Q9H993 441 aa15.94■□□□□ 0.14
PRKDC-206ENST00000536429 PI4KBQ9UBF8 816 aa15.94■□□□□ 0.14
PRKDC-206ENST00000536429 KCNH4Q9UQ05 1017 aa15.94■□□□□ 0.14
PRKDC-206ENST00000536429 ZHX2Q9Y6X8 837 aa15.94■□□□□ 0.14
PRKDC-206ENST00000536429 CASP8AP2Q9UKL3 1982 aa15.94■□□□□ 0.14
PRKDC-206ENST00000536429 BTBD19C9JJ37 291 aa15.93■□□□□ 0.14
PRKDC-206ENST00000536429 GPR25O00155 361 aa15.93■□□□□ 0.14
PRKDC-206ENST00000536429 PRKAB2O43741 272 aa15.93■□□□□ 0.14
PRKDC-206ENST00000536429 CTNND1O60716 968 aaKnown RBP15.93■□□□□ 0.14
PRKDC-206ENST00000536429 MBD4O95243 580 aa15.93■□□□□ 0.14
PRKDC-206ENST00000536429 ALDH1A1P00352 501 aa15.93■□□□□ 0.14
PRKDC-206ENST00000536429 CRHR2Q13324 411 aa15.93■□□□□ 0.14
PRKDC-206ENST00000536429 AAMPQ13685 434 aa15.93■□□□□ 0.14
PRKDC-206ENST00000536429 IFFO2Q5TF58 517 aa15.93■□□□□ 0.14
PRKDC-206ENST00000536429 METTL16Q86W50 562 aaKnown RBP15.93■□□□□ 0.14
PRKDC-206ENST00000536429 SDR42E1Q8WUS8 393 aa15.93■□□□□ 0.14
PRKDC-206ENST00000536429 GCC1Q96CN9 775 aa15.93■□□□□ 0.14
PRKDC-206ENST00000536429 PICK1Q9NRD5 415 aa15.93■□□□□ 0.14
PRKDC-206ENST00000536429 CETPP11597 493 aa15.92■□□□□ 0.14
PRKDC-206ENST00000536429 MX1P20591 662 aa15.92■□□□□ 0.14
PRKDC-206ENST00000536429 CERS3Q8IU89 383 aa15.92■□□□□ 0.14
PRKDC-206ENST00000536429 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.92■□□□□ 0.14
PRKDC-206ENST00000536429 PUS7LQ9H0K6 701 aaKnown RBP15.92■□□□□ 0.14
PRKDC-206ENST00000536429 HERC5Q9UII4 1024 aaKnown RBP15.92■□□□□ 0.14
PRKDC-206ENST00000536429 TTC41PQ6P2S7 1318 aa15.92■□□□□ 0.14
PRKDC-206ENST00000536429 SIPA1L1O43166 1804 aa15.91■□□□□ 0.14
PRKDC-206ENST00000536429 CAP2P40123 477 aa15.91■□□□□ 0.14
PRKDC-206ENST00000536429 PLCD1P51178 756 aa15.91■□□□□ 0.14
PRKDC-206ENST00000536429 UBE3CQ15386 1083 aa15.91■□□□□ 0.14
PRKDC-206ENST00000536429 B4GALNT3Q6L9W6 998 aa15.91■□□□□ 0.14
PRKDC-206ENST00000536429 SMC5Q8IY18 1101 aa15.91■□□□□ 0.14
PRKDC-206ENST00000536429 KBTBD3Q8NAB2 608 aa15.91■□□□□ 0.14
PRKDC-206ENST00000536429 CRNKL1Q9BZJ0 848 aaKnown RBP15.91■□□□□ 0.14
PRKDC-206ENST00000536429 MCOLN1Q9GZU1 580 aa15.91■□□□□ 0.14
PRKDC-206ENST00000536429 AFG3L2Q9Y4W6 797 aa15.91■□□□□ 0.14
PRKDC-206ENST00000536429 LAMB1P07942 1786 aa15.9■□□□□ 0.14
PRKDC-206ENST00000536429 SMIM22K7EJ46 135 aa15.9■□□□□ 0.14
PRKDC-206ENST00000536429 CAPN15O75808 1086 aa15.9■□□□□ 0.14
PRKDC-206ENST00000536429 GDF11O95390 407 aa15.9■□□□□ 0.14
PRKDC-206ENST00000536429 HLA-DOAP06340 250 aa15.9■□□□□ 0.14
PRKDC-206ENST00000536429 CYP2D6P10635 497 aa15.9■□□□□ 0.14
PRKDC-206ENST00000536429 CAP1Q01518 475 aa15.9■□□□□ 0.14
PRKDC-206ENST00000536429 DGKZQ13574 1117 aa15.9■□□□□ 0.14
PRKDC-206ENST00000536429 TAF1CQ15572 869 aaPredicted RBP15.9■□□□□ 0.14
PRKDC-206ENST00000536429 OTUD7BQ6GQQ9 843 aa15.9■□□□□ 0.14
PRKDC-206ENST00000536429 FOXP4Q8IVH2 680 aaPredicted RBP15.9■□□□□ 0.14
PRKDC-206ENST00000536429 CRACR2BQ8N4Y2 399 aaPredicted RBP15.9■□□□□ 0.14
PRKDC-206ENST00000536429 LNPKQ9C0E8 428 aa15.9■□□□□ 0.14
PRKDC-206ENST00000536429 RWDD1Q9H446 243 aaPredicted RBP15.9■□□□□ 0.14
PRKDC-206ENST00000536429 DCP1AQ9NPI6 582 aaPredicted RBP15.9■□□□□ 0.14
PRKDC-206ENST00000536429 CDK5RAP2Q96SN8 1893 aa15.9■□□□□ 0.14
PRKDC-206ENST00000536429 A0A0G2JLL6 359 aaPredicted RBP15.89■□□□□ 0.13
PRKDC-206ENST00000536429 TRIM75PA6NK02 468 aa15.89■□□□□ 0.13
PRKDC-206ENST00000536429 CXCL11O14625 94 aa15.89■□□□□ 0.13
PRKDC-206ENST00000536429 GLRX3O76003 335 aaKnown RBP15.89■□□□□ 0.13
PRKDC-206ENST00000536429 NOM1Q5C9Z4 860 aaKnown RBP15.89■□□□□ 0.13
PRKDC-206ENST00000536429 GPAT2Q6NUI2 795 aa15.89■□□□□ 0.13
PRKDC-206ENST00000536429 PRRT2Q7Z6L0 340 aaPredicted RBP15.89■□□□□ 0.13
PRKDC-206ENST00000536429 OSBP2Q969R2 916 aa15.89■□□□□ 0.13
PRKDC-206ENST00000536429 HTTP42858 3142 aa15.89■□□□□ 0.13
PRKDC-206ENST00000536429 ERC2O15083 957 aa15.88■□□□□ 0.13
PRKDC-206ENST00000536429 FKTNO75072 461 aa15.88■□□□□ 0.13
PRKDC-206ENST00000536429 MCM9Q9NXL9 1143 aa15.88■□□□□ 0.13
PRKDC-206ENST00000536429 STAP2Q9UGK3 403 aa15.88■□□□□ 0.13
PRKDC-206ENST00000536429 FOCADQ5VW36 1801 aa15.88■□□□□ 0.13
PRKDC-206ENST00000536429 CYP2D7A0A087X1C5 515 aa15.87■□□□□ 0.13
PRKDC-206ENST00000536429 M0R2C6 588 aa15.87■□□□□ 0.13
PRKDC-206ENST00000536429 PDHXO00330 501 aa15.87■□□□□ 0.13
PRKDC-206ENST00000536429 RNF113AO15541 343 aaKnown RBP15.87■□□□□ 0.13
PRKDC-206ENST00000536429 POLR3DP05423 398 aaPredicted RBP15.87■□□□□ 0.13
PRKDC-206ENST00000536429 PDE1AP54750 535 aa15.87■□□□□ 0.13
PRKDC-206ENST00000536429 SPP2Q13103 211 aa15.87■□□□□ 0.13
PRKDC-206ENST00000536429 ZSCAN25Q6NSZ9 544 aa15.87■□□□□ 0.13
PRKDC-206ENST00000536429 CTU1Q7Z7A3 348 aaKnown RBP15.87■□□□□ 0.13
PRKDC-206ENST00000536429 ANKRD23Q86SG2 305 aa15.87■□□□□ 0.13
PRKDC-206ENST00000536429 TTC6Q86TZ1 520 aa15.87■□□□□ 0.13
PRKDC-206ENST00000536429 ABHD8Q96I13 439 aa15.87■□□□□ 0.13
PRKDC-206ENST00000536429 TRIM34Q9BYJ4 488 aa15.87■□□□□ 0.13
PRKDC-206ENST00000536429 EHD4Q9H223 541 aa15.87■□□□□ 0.13
PRKDC-206ENST00000536429 ZFYVE28Q9HCC9 887 aa15.87■□□□□ 0.13
PRKDC-206ENST00000536429 ZBTB47Q9UFB7 747 aaPredicted RBP15.87■□□□□ 0.13
PRKDC-206ENST00000536429 SERPINB13Q9UIV8 391 aa15.87■□□□□ 0.13
PRKDC-206ENST00000536429 ZBTB21Q9ULJ3 1066 aa15.87■□□□□ 0.13
PRKDC-206ENST00000536429 DDX60LQ5H9U9 1706 aaKnown RBP15.86■□□□□ 0.13
PRKDC-206ENST00000536429 USP17L5A8MUK1 530 aa15.86■□□□□ 0.13
PRKDC-206ENST00000536429 SHMT1P34896 483 aa15.86■□□□□ 0.13
PRKDC-206ENST00000536429 NUCB1Q02818 461 aa15.86■□□□□ 0.13
PRKDC-206ENST00000536429 GABPAQ06546 454 aa15.86■□□□□ 0.13
PRKDC-206ENST00000536429 TATDN1Q6P1N9 297 aa15.86■□□□□ 0.13
PRKDC-206ENST00000536429 GADL1Q6ZQY3 521 aa15.86■□□□□ 0.13
PRKDC-206ENST00000536429 SLC44A5Q8NCS7 719 aa15.86■□□□□ 0.13
PRKDC-206ENST00000536429 CD99L2Q8TCZ2 262 aa15.86■□□□□ 0.13
PRKDC-206ENST00000536429 APPBP2Q92624 585 aa15.86■□□□□ 0.13
PRKDC-206ENST00000536429 DYNLL2Q96FJ2 89 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms