RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 ROBO3Q96MS0 1386 aa19.28■□□□□ 0.68
VAMP1-205ENST00000535927 SEC24BO95487 1268 aa19.27■□□□□ 0.68
VAMP1-205ENST00000535927 HMGB1P09429 215 aaKnown RBP19.27■□□□□ 0.68
VAMP1-205ENST00000535927 CREB3L3Q68CJ9 461 aa19.27■□□□□ 0.68
VAMP1-205ENST00000535927 ZSCAN29Q8IWY8 852 aaPredicted RBP19.27■□□□□ 0.68
VAMP1-205ENST00000535927 C22orf23Q9BZE7 217 aa19.27■□□□□ 0.68
VAMP1-205ENST00000535927 SERPINB13Q9UIV8 391 aa19.27■□□□□ 0.68
VAMP1-205ENST00000535927 CNTNAP1P78357 1384 aa19.27■□□□□ 0.68
VAMP1-205ENST00000535927 SLC27A2O14975 620 aa19.26■□□□□ 0.67
VAMP1-205ENST00000535927 PSMA5P28066 241 aa19.26■□□□□ 0.67
VAMP1-205ENST00000535927 TCP10Q12799 353 aa19.26■□□□□ 0.67
VAMP1-205ENST00000535927 TRDNQ13061 729 aa19.26■□□□□ 0.67
VAMP1-205ENST00000535927 EAPPQ56P03 285 aaPredicted RBP19.26■□□□□ 0.67
VAMP1-205ENST00000535927 AKNAD1Q5T1N1 836 aa19.26■□□□□ 0.67
VAMP1-205ENST00000535927 DCAF15Q66K64 600 aa19.26■□□□□ 0.67
VAMP1-205ENST00000535927 MFSD6Q6ZSS7 791 aa19.26■□□□□ 0.67
VAMP1-205ENST00000535927 STAG1Q8WVM7 1258 aa19.26■□□□□ 0.67
VAMP1-205ENST00000535927 MTA3Q9BTC8 594 aa19.26■□□□□ 0.67
VAMP1-205ENST00000535927 KRT23Q9C075 422 aa19.26■□□□□ 0.67
VAMP1-205ENST00000535927 PALD1Q9ULE6 856 aa19.26■□□□□ 0.67
VAMP1-205ENST00000535927 DDX60LQ5H9U9 1706 aaKnown RBP19.25■□□□□ 0.67
VAMP1-205ENST00000535927 LAMA4Q16363 1823 aa19.25■□□□□ 0.67
VAMP1-205ENST00000535927 MINDY4BA8MYZ0 360 aa19.25■□□□□ 0.67
VAMP1-205ENST00000535927 CYP21A2P08686 494 aa19.25■□□□□ 0.67
VAMP1-205ENST00000535927 NF2P35240 595 aa19.25■□□□□ 0.67
VAMP1-205ENST00000535927 CACNB3P54284 484 aa19.25■□□□□ 0.67
VAMP1-205ENST00000535927 KRT26Q7Z3Y9 468 aa19.25■□□□□ 0.67
VAMP1-205ENST00000535927 CCDC17Q96LX7 622 aa19.25■□□□□ 0.67
VAMP1-205ENST00000535927 CSRNP1Q96S65 589 aa19.25■□□□□ 0.67
VAMP1-205ENST00000535927 TRIM34Q9BYJ4 488 aa19.25■□□□□ 0.67
VAMP1-205ENST00000535927 TM6SF1Q9BZW5 370 aa19.25■□□□□ 0.67
VAMP1-205ENST00000535927 GINM1Q9NU53 330 aa19.25■□□□□ 0.67
VAMP1-205ENST00000535927 CLEC11AQ9Y240 323 aa19.25■□□□□ 0.67
VAMP1-205ENST00000535927 UNCXA6NJT0 531 aa19.24■□□□□ 0.67
VAMP1-205ENST00000535927 ORC4O43929 436 aa19.24■□□□□ 0.67
VAMP1-205ENST00000535927 GABPAQ06546 454 aa19.24■□□□□ 0.67
VAMP1-205ENST00000535927 PPP4R3BQ5MIZ7 849 aa19.24■□□□□ 0.67
VAMP1-205ENST00000535927 C16orf86Q6ZW13 317 aa19.24■□□□□ 0.67
VAMP1-205ENST00000535927 TEPSINQ96N21 525 aa19.24■□□□□ 0.67
VAMP1-205ENST00000535927 LAMB1P07942 1786 aa19.24■□□□□ 0.67
VAMP1-205ENST00000535927 PCNTO95613 3336 aa19.23■□□□□ 0.67
VAMP1-205ENST00000535927 DDTLA6NHG4 134 aaPredicted RBP19.23■□□□□ 0.67
VAMP1-205ENST00000535927 PLCD1P51178 756 aa19.23■□□□□ 0.67
VAMP1-205ENST00000535927 CCDC178Q5BJE1 867 aa19.23■□□□□ 0.67
VAMP1-205ENST00000535927 CRACR2BQ8N4Y2 399 aaPredicted RBP19.23■□□□□ 0.67
VAMP1-205ENST00000535927 NCOA7Q8NI08 942 aa19.23■□□□□ 0.67
VAMP1-205ENST00000535927 TBC1D32Q96NH3 1257 aa19.23■□□□□ 0.67
VAMP1-205ENST00000535927 SAP30BPQ9UHR5 308 aaKnown RBP19.23■□□□□ 0.67
VAMP1-205ENST00000535927 CHADLQ6NUI6 762 aa19.22■□□□□ 0.67
VAMP1-205ENST00000535927 SH3BP5LQ7L8J4 393 aa19.22■□□□□ 0.67
VAMP1-205ENST00000535927 ZFPM1Q8IX07 1006 aa19.22■□□□□ 0.67
VAMP1-205ENST00000535927 TMEM39BQ9GZU3 492 aa19.22■□□□□ 0.67
VAMP1-205ENST00000535927 MKNK2Q9HBH9 465 aa19.22■□□□□ 0.67
VAMP1-205ENST00000535927 CDK8P49336 464 aa19.21■□□□□ 0.67
VAMP1-205ENST00000535927 TATDN1Q6P1N9 297 aa19.21■□□□□ 0.67
VAMP1-205ENST00000535927 ZNF444Q8N0Y2 327 aaPredicted RBP19.21■□□□□ 0.67
VAMP1-205ENST00000535927 ESR2Q92731 530 aa19.21■□□□□ 0.67
VAMP1-205ENST00000535927 SNX14Q9Y5W7 946 aa19.21■□□□□ 0.67
VAMP1-205ENST00000535927 ASTN2O75129 1339 aaPredicted RBP19.21■□□□□ 0.67
VAMP1-205ENST00000535927 WDR19Q8NEZ3 1342 aa19.21■□□□□ 0.67
VAMP1-205ENST00000535927 E7EWF7 191 aa19.2■□□□□ 0.66
VAMP1-205ENST00000535927 PPP1R12BO60237 982 aaPredicted RBP19.2■□□□□ 0.66
VAMP1-205ENST00000535927 FKBP1BP68106 108 aa19.2■□□□□ 0.66
VAMP1-205ENST00000535927 RALYLQ86SE5 291 aaKnown RBP19.2■□□□□ 0.66
VAMP1-205ENST00000535927 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.2■□□□□ 0.66
VAMP1-205ENST00000535927 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.2■□□□□ 0.66
VAMP1-205ENST00000535927 HAND2P61296 217 aa19.19■□□□□ 0.66
VAMP1-205ENST00000535927 USP48Q86UV5 1035 aa19.19■□□□□ 0.66
VAMP1-205ENST00000535927 NEK1Q96PY6 1258 aa19.19■□□□□ 0.66
VAMP1-205ENST00000535927 ZNF341Q9BYN7 854 aa19.19■□□□□ 0.66
VAMP1-205ENST00000535927 MYH8P13535 1937 aa19.18■□□□□ 0.66
VAMP1-205ENST00000535927 CYP2D6P10635 497 aa19.18■□□□□ 0.66
VAMP1-205ENST00000535927 MCM5P33992 734 aa19.18■□□□□ 0.66
VAMP1-205ENST00000535927 CTDSPL2Q05D32 466 aa19.18■□□□□ 0.66
VAMP1-205ENST00000535927 RASEFQ8IZ41 740 aa19.18■□□□□ 0.66
VAMP1-205ENST00000535927 FBXL16Q8N461 479 aa19.18■□□□□ 0.66
VAMP1-205ENST00000535927 TCP11L1Q9NUJ3 509 aa19.18■□□□□ 0.66
VAMP1-205ENST00000535927 ZNF112Q9UJU3 913 aa19.18■□□□□ 0.66
VAMP1-205ENST00000535927 CYP2D7A0A087X1C5 515 aa19.17■□□□□ 0.66
VAMP1-205ENST00000535927 CTNND1O60716 968 aaKnown RBP19.17■□□□□ 0.66
VAMP1-205ENST00000535927 SART3Q15020 963 aaKnown RBP19.17■□□□□ 0.66
VAMP1-205ENST00000535927 RABEP1Q15276 862 aa19.17■□□□□ 0.66
VAMP1-205ENST00000535927 MAP3K11Q16584 847 aa19.17■□□□□ 0.66
VAMP1-205ENST00000535927 CERKLQ49MI3 558 aaPredicted RBP19.17■□□□□ 0.66
VAMP1-205ENST00000535927 NBPF12Q5TAG4 269 aaPredicted RBP19.17■□□□□ 0.66
VAMP1-205ENST00000535927 DHX32Q7L7V1 743 aaKnown RBP19.17■□□□□ 0.66
VAMP1-205ENST00000535927 IQCA1Q86XH1 822 aa19.17■□□□□ 0.66
VAMP1-205ENST00000535927 TBC1D10CQ8IV04 446 aa19.17■□□□□ 0.66
VAMP1-205ENST00000535927 TMTC2Q8N394 836 aa19.17■□□□□ 0.66
VAMP1-205ENST00000535927 NBPF3Q9H094 633 aa19.17■□□□□ 0.66
VAMP1-205ENST00000535927 ALDH8A1Q9H2A2 487 aaPredicted RBP19.17■□□□□ 0.66
VAMP1-205ENST00000535927 ZSWIM6Q9HCJ5 1215 aa19.17■□□□□ 0.66
VAMP1-205ENST00000535927 HSPA1AP0DMV8 641 aaKnown RBP19.16■□□□□ 0.66
VAMP1-205ENST00000535927 HSPA1BP0DMV9 641 aaKnown RBP19.16■□□□□ 0.66
VAMP1-205ENST00000535927 BLOC1S2Q6QNY1 142 aa19.16■□□□□ 0.66
VAMP1-205ENST00000535927 ARMC9Q7Z3E5 817 aa19.16■□□□□ 0.66
VAMP1-205ENST00000535927 CDCA5Q96FF9 252 aa19.16■□□□□ 0.66
VAMP1-205ENST00000535927 TMEM87BQ96K49 555 aa19.16■□□□□ 0.66
VAMP1-205ENST00000535927 TTC14Q96N46 770 aa19.16■□□□□ 0.66
VAMP1-205ENST00000535927 TBC1D2Q9BYX2 928 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms