RNA–Protein interactions for RNA: ENST00000535788.1

UBB-204, Transcript of ubiquitin B, humanhuman

TSL 2 BASIC

Gene UBB, Length 704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-204ENST00000535788 IFNL1Q8IU54 200 aa11.27□□□□□ -0.61
UBB-204ENST00000535788 CDAN1Q8IWY9 1227 aa11.27□□□□□ -0.61
UBB-204ENST00000535788 DBNDD2Q9BQY9 259 aa11.27□□□□□ -0.61
UBB-204ENST00000535788 TMEM39BQ9GZU3 492 aa11.27□□□□□ -0.61
UBB-204ENST00000535788 ZBTB40Q9NUA8 1239 aa11.27□□□□□ -0.61
UBB-204ENST00000535788 HMG20BQ9P0W2 317 aa11.27□□□□□ -0.61
UBB-204ENST00000535788 CIZ1Q9ULV3 898 aaPredicted RBP11.27□□□□□ -0.61
UBB-204ENST00000535788 EXOC6BQ9Y2D4 811 aa11.27□□□□□ -0.61
UBB-204ENST00000535788 UQCRFS1P1P0C7P4 283 aa11.26□□□□□ -0.61
UBB-204ENST00000535788 PDE3AQ14432 1141 aa11.26□□□□□ -0.61
UBB-204ENST00000535788 SLC9C1Q4G0N8 1177 aa11.26□□□□□ -0.61
UBB-204ENST00000535788 LDLRAD1Q5T700 205 aa11.26□□□□□ -0.61
UBB-204ENST00000535788 NBPF11Q86T75 865 aa11.26□□□□□ -0.61
UBB-204ENST00000535788 SPATA5Q8NB90 893 aa11.26□□□□□ -0.61
UBB-204ENST00000535788 ZNF333Q96JL9 665 aa11.26□□□□□ -0.61
UBB-204ENST00000535788 TEPSINQ96N21 525 aa11.26□□□□□ -0.61
UBB-204ENST00000535788 CHMP4BQ9H444 224 aaKnown RBP11.26□□□□□ -0.61
UBB-204ENST00000535788 KCNG1Q9UIX4 513 aa11.26□□□□□ -0.61
UBB-204ENST00000535788 MYH2Q9UKX2 1941 aa11.26□□□□□ -0.61
UBB-204ENST00000535788 OTOFQ9HC10 1997 aa11.26□□□□□ -0.61
UBB-204ENST00000535788 CUL9Q8IWT3 2517 aa11.25□□□□□ -0.61
UBB-204ENST00000535788 RBM47A0AV96 593 aaKnown RBP11.25□□□□□ -0.61
UBB-204ENST00000535788 MANSC4A6NHS7 340 aaPredicted RBP11.25□□□□□ -0.61
UBB-204ENST00000535788 TCF3P15923 654 aa11.25□□□□□ -0.61
UBB-204ENST00000535788 CALRP27797 417 aaKnown RBP11.25□□□□□ -0.61
UBB-204ENST00000535788 MCAMP43121 646 aa11.25□□□□□ -0.61
UBB-204ENST00000535788 MNX1P50219 401 aaPredicted RBP11.25□□□□□ -0.61
UBB-204ENST00000535788 MAP3K11Q16584 847 aa11.25□□□□□ -0.61
UBB-204ENST00000535788 CCDC158Q5M9N0 1113 aa11.25□□□□□ -0.61
UBB-204ENST00000535788 TTC39AQ5SRH9 613 aa11.25□□□□□ -0.61
UBB-204ENST00000535788 CCDC181Q5TID7 509 aa11.25□□□□□ -0.61
UBB-204ENST00000535788 FKBP1CQ5VVH2 108 aa11.25□□□□□ -0.61
UBB-204ENST00000535788 CDC42EP5Q6NZY7 148 aa11.25□□□□□ -0.61
UBB-204ENST00000535788 FAM83AQ86UY5 434 aa11.25□□□□□ -0.61
UBB-204ENST00000535788 ERC1Q8IUD2 1116 aa11.25□□□□□ -0.61
UBB-204ENST00000535788 RPAP2Q8IXW5 612 aaPredicted RBP11.25□□□□□ -0.61
UBB-204ENST00000535788 UBXN4Q92575 508 aa11.25□□□□□ -0.61
UBB-204ENST00000535788 SLC10A4Q96EP9 437 aa11.25□□□□□ -0.61
UBB-204ENST00000535788 CLMNQ96JQ2 1002 aa11.25□□□□□ -0.61
UBB-204ENST00000535788 TLR7Q9NYK1 1049 aaKnown RBP11.25□□□□□ -0.61
UBB-204ENST00000535788 DBNLQ9UJU6 430 aaKnown RBP11.25□□□□□ -0.61
UBB-204ENST00000535788 GAKO14976 1311 aa11.25□□□□□ -0.61
UBB-204ENST00000535788 MAST2Q6P0Q8 1798 aa11.24□□□□□ -0.61
UBB-204ENST00000535788 RBBP6Q7Z6E9 1792 aaKnown RBP11.24□□□□□ -0.61
UBB-204ENST00000535788 TESPA1A2RU30 521 aaPredicted RBP11.24□□□□□ -0.61
UBB-204ENST00000535788 IGF2BP3O00425 579 aaKnown RBP eCLIP11.24□□□□□ -0.61
UBB-204ENST00000535788 HMMRO75330 724 aa11.24□□□□□ -0.61
UBB-204ENST00000535788 USP2O75604 605 aaPredicted RBP11.24□□□□□ -0.61
UBB-204ENST00000535788 IREB2P48200 963 aaKnown RBP11.24□□□□□ -0.61
UBB-204ENST00000535788 INHBEP58166 350 aa11.24□□□□□ -0.61
UBB-204ENST00000535788 CAP1Q01518 475 aa11.24□□□□□ -0.61
UBB-204ENST00000535788 SP3Q02447 781 aa11.24□□□□□ -0.61
UBB-204ENST00000535788 TBC1D9Q6ZT07 1266 aa11.24□□□□□ -0.61
UBB-204ENST00000535788 SND1Q7KZF4 910 aaKnown RBP eCLIP11.24□□□□□ -0.612e-19■■□□□ 13.2
UBB-204ENST00000535788 SIRT2Q8IXJ6 389 aa11.24□□□□□ -0.61
UBB-204ENST00000535788 NME8Q8N427 588 aa11.24□□□□□ -0.61
UBB-204ENST00000535788 EAF2Q96CJ1 260 aaPredicted RBP11.24□□□□□ -0.61
UBB-204ENST00000535788 CCDC8Q9H0W5 538 aaPredicted RBP11.24□□□□□ -0.61
UBB-204ENST00000535788 SNRKQ9NRH2 765 aa11.24□□□□□ -0.61
UBB-204ENST00000535788 USP40Q9NVE5 1235 aa11.24□□□□□ -0.61
UBB-204ENST00000535788 RPAP1Q9BWH6 1393 aaPredicted RBP11.24□□□□□ -0.61
UBB-204ENST00000535788 BTDP43251 543 aa11.23□□□□□ -0.61
UBB-204ENST00000535788 MECOMQ03112 1051 aa11.23□□□□□ -0.61
UBB-204ENST00000535788 TCP10Q12799 353 aa11.23□□□□□ -0.61
UBB-204ENST00000535788 NFIAQ12857 509 aa11.23□□□□□ -0.61
UBB-204ENST00000535788 CRHR2Q13324 411 aa11.23□□□□□ -0.61
UBB-204ENST00000535788 LONRF3Q496Y0 759 aa11.23□□□□□ -0.61
UBB-204ENST00000535788 AACSQ86V21 672 aa11.23□□□□□ -0.61
UBB-204ENST00000535788 SLF2Q8IX21 1173 aa11.23□□□□□ -0.61
UBB-204ENST00000535788 KRI1Q8N9T8 703 aaKnown RBP11.23□□□□□ -0.61
UBB-204ENST00000535788 IL1RAPL2Q9NP60 686 aa11.23□□□□□ -0.61
UBB-204ENST00000535788 RYDENQ9NUL5 291 aaKnown RBP11.23□□□□□ -0.61
UBB-204ENST00000535788 RAI14Q9P0K7 980 aa11.23□□□□□ -0.61
UBB-204ENST00000535788 MAGEC2Q9UBF1 373 aaPredicted RBP11.23□□□□□ -0.61
UBB-204ENST00000535788 PTCH2Q9Y6C5 1203 aa11.23□□□□□ -0.61
UBB-204ENST00000535788 MROH7-TTC4A0A0A0MT08 1334 aa11.23□□□□□ -0.61
UBB-204ENST00000535788 RFX7Q2KHR2 1363 aa11.22□□□□□ -0.61
UBB-204ENST00000535788 RHPN1Q8TCX5 695 aa11.22□□□□□ -0.61
UBB-204ENST00000535788 SH3TC2Q8TF17 1288 aa11.22□□□□□ -0.61
UBB-204ENST00000535788 ZNF384Q8TF68 577 aa11.22□□□□□ -0.61
UBB-204ENST00000535788 FAM151AQ8WW52 585 aa11.22□□□□□ -0.61
UBB-204ENST00000535788 NSUN4Q96CB9 384 aaKnown RBP11.22□□□□□ -0.61
UBB-204ENST00000535788 LRCH3Q96II8 777 aa11.22□□□□□ -0.61
UBB-204ENST00000535788 WNK4Q96J92 1243 aa11.22□□□□□ -0.61
UBB-204ENST00000535788 ZNF512BQ96KM6 892 aaPredicted RBP11.22□□□□□ -0.61
UBB-204ENST00000535788 LRP2BPQ9P2M1 347 aa11.22□□□□□ -0.61
UBB-204ENST00000535788 AK9Q5TCS8 1911 aa11.21□□□□□ -0.61
UBB-204ENST00000535788 SOX1O00570 391 aaPredicted RBP11.21□□□□□ -0.61
UBB-204ENST00000535788 ZBTB48P10074 688 aaPredicted RBP11.21□□□□□ -0.61
UBB-204ENST00000535788 ZAP70P43403 619 aa11.21□□□□□ -0.61
UBB-204ENST00000535788 RGS3P49796 1198 aa11.21□□□□□ -0.61
UBB-204ENST00000535788 RRP1P56182 461 aaKnown RBP11.21□□□□□ -0.61
UBB-204ENST00000535788 GSTO1P78417 241 aa11.21□□□□□ -0.61
UBB-204ENST00000535788 VGLL4Q14135 290 aa11.21□□□□□ -0.61
UBB-204ENST00000535788 OTUD7BQ6GQQ9 843 aa11.21□□□□□ -0.61
UBB-204ENST00000535788 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.21□□□□□ -0.617e-15■■■□□ 15.6
UBB-204ENST00000535788 HOOK2Q96ED9 719 aa11.21□□□□□ -0.61
UBB-204ENST00000535788 KIF1BPQ96EK5 621 aa11.21□□□□□ -0.61
UBB-204ENST00000535788 FAM163AQ96GL9 167 aaPredicted RBP11.21□□□□□ -0.61
UBB-204ENST00000535788 ELP3Q9H9T3 547 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 244.6 ms