RNA–Protein interactions for RNA: ENST00000534839.1

TNC-209, Transcript of tenascin C, humanhuman

TSL 3

Gene TNC, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-209ENST00000534839 LRRC26Q2I0M4 334 aa13.21□□□□□ -0.29
TNC-209ENST00000534839 C9orf50Q5SZB4 431 aa13.21□□□□□ -0.29
TNC-209ENST00000534839 STRIP1Q5VSL9 837 aa13.21□□□□□ -0.29
TNC-209ENST00000534839 RIC3Q7Z5B4 369 aa13.21□□□□□ -0.29
TNC-209ENST00000534839 POLR3EQ9NVU0 708 aa13.21□□□□□ -0.29
TNC-209ENST00000534839 FAM86C2PA6NEL3 165 aa13.2□□□□□ -0.3
TNC-209ENST00000534839 PPP1R18Q6NYC8 613 aa13.2□□□□□ -0.3
TNC-209ENST00000534839 MCM10Q7L590 875 aa13.2□□□□□ -0.3
TNC-209ENST00000534839 THUMPD2Q9BTF0 503 aaKnown RBP13.2□□□□□ -0.3
TNC-209ENST00000534839 SALL2Q9Y467 1007 aaPredicted RBP13.2□□□□□ -0.3
TNC-209ENST00000534839 SPDYE5A6NIY4 337 aa13.19□□□□□ -0.3
TNC-209ENST00000534839 DIAPH1O60610 1272 aaKnown RBP13.19□□□□□ -0.3
TNC-209ENST00000534839 GPR37L1O60883 481 aa13.19□□□□□ -0.3
TNC-209ENST00000534839 S1PR4O95977 384 aa13.19□□□□□ -0.3
TNC-209ENST00000534839 RASA3Q14644 834 aa13.19□□□□□ -0.3
TNC-209ENST00000534839 DLGAP5Q15398 846 aa13.19□□□□□ -0.3
TNC-209ENST00000534839 MTMR14Q8NCE2 650 aa13.19□□□□□ -0.3
TNC-209ENST00000534839 VEZTQ9HBM0 779 aa13.19□□□□□ -0.3
TNC-209ENST00000534839 MIS18AQ9NYP9 233 aa13.19□□□□□ -0.3
TNC-209ENST00000534839 MGAMO43451 1857 aa13.19□□□□□ -0.3
TNC-209ENST00000534839 AOX1Q06278 1338 aa13.18□□□□□ -0.3
TNC-209ENST00000534839 BMP1P13497 986 aa13.18□□□□□ -0.3
TNC-209ENST00000534839 NHLH1Q02575 133 aa13.18□□□□□ -0.3
TNC-209ENST00000534839 IRF5Q13568 498 aa13.18□□□□□ -0.3
TNC-209ENST00000534839 DIXDC1Q155Q3 683 aa13.18□□□□□ -0.3
TNC-209ENST00000534839 Q3C1V9 767 aa13.18□□□□□ -0.3
TNC-209ENST00000534839 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.18□□□□□ -0.3
TNC-209ENST00000534839 PRDM9Q9NQV7 894 aa13.18□□□□□ -0.3
TNC-209ENST00000534839 OGDHLQ9ULD0 1010 aa13.18□□□□□ -0.3
TNC-209ENST00000534839 PDHXO00330 501 aa13.17□□□□□ -0.3
TNC-209ENST00000534839 BCRP11274 1271 aa13.17□□□□□ -0.3
TNC-209ENST00000534839 COL6A1P12109 1028 aa13.17□□□□□ -0.3
TNC-209ENST00000534839 SNAPC2Q13487 334 aa13.17□□□□□ -0.3
TNC-209ENST00000534839 CSPP1Q1MSJ5 1256 aa13.17□□□□□ -0.3
TNC-209ENST00000534839 LRP10Q7Z4F1 713 aa13.17□□□□□ -0.3
TNC-209ENST00000534839 ZBTB38Q8NAP3 1195 aaPredicted RBP13.17□□□□□ -0.3
TNC-209ENST00000534839 PHACTR3Q96KR7 559 aa13.17□□□□□ -0.3
TNC-209ENST00000534839 SEC31BQ9NQW1 1179 aa13.17□□□□□ -0.3
TNC-209ENST00000534839 CSADQ9Y600 493 aa13.17□□□□□ -0.3
TNC-209ENST00000534839 DCTN1Q14203 1278 aa13.16□□□□□ -0.3
TNC-209ENST00000534839 PDE3AQ14432 1141 aa13.16□□□□□ -0.3
TNC-209ENST00000534839 PROCA1Q8NCQ7 364 aaPredicted RBP13.16□□□□□ -0.3
TNC-209ENST00000534839 POLR3GLQ9BT43 218 aa13.16□□□□□ -0.3
TNC-209ENST00000534839 SNCAIPQ9Y6H5 919 aa13.16□□□□□ -0.3
TNC-209ENST00000534839 TCF20Q9UGU0 1960 aaKnown RBP13.16□□□□□ -0.3
TNC-209ENST00000534839 ECM29Q5VYK3 1845 aa13.16□□□□□ -0.3
TNC-209ENST00000534839 ATP2B4P23634 1241 aa13.15□□□□□ -0.3
TNC-209ENST00000534839 EIF4G2P78344 907 aaKnown RBP eCLIP13.15□□□□□ -0.3
TNC-209ENST00000534839 FOXK2Q01167 660 aa13.15□□□□□ -0.3
TNC-209ENST00000534839 QPCTQ16769 361 aa13.15□□□□□ -0.3
TNC-209ENST00000534839 HSP90AB3PQ58FF7 597 aa13.15□□□□□ -0.3
TNC-209ENST00000534839 ANKRD23Q86SG2 305 aa13.15□□□□□ -0.3
TNC-209ENST00000534839 FAM89AQ96GI7 184 aa13.15□□□□□ -0.3
TNC-209ENST00000534839 PRMT6Q96LA8 375 aaPredicted RBP13.15□□□□□ -0.3
TNC-209ENST00000534839 SLC6A16Q9GZN6 736 aa13.15□□□□□ -0.3
TNC-209ENST00000534839 RSPH6AQ9H0K4 717 aa13.15□□□□□ -0.3
TNC-209ENST00000534839 XDHP47989 1333 aa13.14□□□□□ -0.31
TNC-209ENST00000534839 SMIM22K7EJ46 135 aa13.14□□□□□ -0.31
TNC-209ENST00000534839 TRIM32Q13049 653 aa13.14□□□□□ -0.31
TNC-209ENST00000534839 CCDC85BQ15834 202 aaPredicted RBP13.14□□□□□ -0.31
TNC-209ENST00000534839 SH3D19Q5HYK7 790 aa13.14□□□□□ -0.31
TNC-209ENST00000534839 TTLL5Q6EMB2 1281 aa13.14□□□□□ -0.31
TNC-209ENST00000534839 ERO1BQ86YB8 467 aa13.14□□□□□ -0.31
TNC-209ENST00000534839 USB1Q9BQ65 265 aaKnown RBP13.14□□□□□ -0.31
TNC-209ENST00000534839 PANK3Q9H999 370 aa13.14□□□□□ -0.31
TNC-209ENST00000534839 HMX1Q9NP08 348 aaPredicted RBP13.14□□□□□ -0.31
TNC-209ENST00000534839 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.14□□□□□ -0.31
TNC-209ENST00000534839 MED23Q9ULK4 1368 aa13.14□□□□□ -0.31
TNC-209ENST00000534839 NCOR1O75376 2440 aa13.13□□□□□ -0.31
TNC-209ENST00000534839 RNF223E7ERA6 249 aa13.13□□□□□ -0.31
TNC-209ENST00000534839 MYO1BO43795 1136 aa13.13□□□□□ -0.31
TNC-209ENST00000534839 HSPA5P11021 654 aaKnown RBP13.13□□□□□ -0.31
TNC-209ENST00000534839 CLK2P49760 499 aaKnown RBP13.13□□□□□ -0.31
TNC-209ENST00000534839 SKIV2LQ15477 1246 aaKnown RBP13.13□□□□□ -0.31
TNC-209ENST00000534839 TAF7Q15545 349 aaPredicted RBP13.13□□□□□ -0.31
TNC-209ENST00000534839 AKNAD1Q5T1N1 836 aa13.13□□□□□ -0.31
TNC-209ENST00000534839 TEPSINQ96N21 525 aa13.13□□□□□ -0.31
TNC-209ENST00000534839 XIRP2A4UGR9 3374 aa13.13□□□□□ -0.31
TNC-209ENST00000534839 LTBP2Q14767 1821 aa13.13□□□□□ -0.31
TNC-209ENST00000534839 TNPO2O14787 897 aaKnown RBP13.12□□□□□ -0.31
TNC-209ENST00000534839 U2SURPO15042 1029 aaKnown RBP13.12□□□□□ -0.31
TNC-209ENST00000534839 ANXA1P04083 346 aa13.12□□□□□ -0.31
TNC-209ENST00000534839 PPIL2Q13356 520 aa13.12□□□□□ -0.31
TNC-209ENST00000534839 CFAP100Q494V2 611 aa13.12□□□□□ -0.31
TNC-209ENST00000534839 RTL5Q5HYW3 569 aaPredicted RBP13.12□□□□□ -0.31
TNC-209ENST00000534839 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.12□□□□□ -0.31
TNC-209ENST00000534839 RTF1Q92541 710 aaKnown RBP13.12□□□□□ -0.31
TNC-209ENST00000534839 U2AF1L5P0DN76 240 aaPredicted RBP13.11□□□□□ -0.31
TNC-209ENST00000534839 CYP2C8P10632 490 aa13.11□□□□□ -0.31
TNC-209ENST00000534839 EIF4A1P60842 406 aaKnown RBP13.11□□□□□ -0.31
TNC-209ENST00000534839 GTF2IP78347 998 aa13.11□□□□□ -0.31
TNC-209ENST00000534839 U2AF1Q01081 240 aaKnown RBP eCLIP13.11□□□□□ -0.31
TNC-209ENST00000534839 PROSER3Q2NL68 480 aa13.11□□□□□ -0.31
TNC-209ENST00000534839 TXNRD3Q86VQ6 643 aa13.11□□□□□ -0.31
TNC-209ENST00000534839 GAS2L1Q99501 681 aaPredicted RBP13.11□□□□□ -0.31
TNC-209ENST00000534839 COA1Q9GZY4 146 aa13.11□□□□□ -0.31
TNC-209ENST00000534839 ZNF576Q9H609 170 aa13.11□□□□□ -0.31
TNC-209ENST00000534839 MAST2Q6P0Q8 1798 aa13.1□□□□□ -0.31
TNC-209ENST00000534839 KCNQ1P51787 676 aa13.1□□□□□ -0.31
TNC-209ENST00000534839 MOGSQ13724 837 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms