RNA–Protein interactions for RNA: ENST00000534656.2

CCDC84-208, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-208ENST00000534656 FARP2O94887 1054 aaPredicted RBP17.12■□□□□ 0.33
CCDC84-208ENST00000534656 GNAI2P04899 355 aa17.12■□□□□ 0.33
CCDC84-208ENST00000534656 INHAP05111 366 aa17.12■□□□□ 0.33
CCDC84-208ENST00000534656 SPP2Q13103 211 aa17.12■□□□□ 0.33
CCDC84-208ENST00000534656 FAM110CQ1W6H9 321 aa17.12■□□□□ 0.33
CCDC84-208ENST00000534656 ZNF280CQ8ND82 737 aa17.12■□□□□ 0.33
CCDC84-208ENST00000534656 COA7Q96BR5 231 aa17.12■□□□□ 0.33
CCDC84-208ENST00000534656 TBC1D2Q9BYX2 928 aa17.12■□□□□ 0.33
CCDC84-208ENST00000534656 RAI14Q9P0K7 980 aa17.12■□□□□ 0.33
CCDC84-208ENST00000534656 RBM27Q9P2N5 1060 aaKnown RBP17.12■□□□□ 0.33
CCDC84-208ENST00000534656 NR2E3Q9Y5X4 410 aa17.12■□□□□ 0.33
CCDC84-208ENST00000534656 PNMA6EA0A0J9YXQ4 647 aa17.11■□□□□ 0.33
CCDC84-208ENST00000534656 IPO8O15397 1037 aaKnown RBP17.11■□□□□ 0.33
CCDC84-208ENST00000534656 TRIM27P14373 513 aa17.11■□□□□ 0.33
CCDC84-208ENST00000534656 CAP2P40123 477 aa17.11■□□□□ 0.33
CCDC84-208ENST00000534656 MCAMP43121 646 aa17.11■□□□□ 0.33
CCDC84-208ENST00000534656 G3BP1Q13283 466 aaKnown RBP eCLIP17.11■□□□□ 0.33
CCDC84-208ENST00000534656 TFRCP02786 760 aaKnown RBP17.1■□□□□ 0.33
CCDC84-208ENST00000534656 UQCRFS1P1P0C7P4 283 aa17.1■□□□□ 0.33
CCDC84-208ENST00000534656 PABPC4Q13310 644 aaKnown RBP eCLIP17.1■□□□□ 0.33
CCDC84-208ENST00000534656 RRP1BQ14684 758 aaKnown RBP17.1■□□□□ 0.33
CCDC84-208ENST00000534656 TEX11Q8IYF3 940 aa17.1■□□□□ 0.33
CCDC84-208ENST00000534656 PAK6Q9NQU5 681 aaPredicted RBP17.1■□□□□ 0.33
CCDC84-208ENST00000534656 LRP2BPQ9P2M1 347 aa17.1■□□□□ 0.33
CCDC84-208ENST00000534656 HERC5Q9UII4 1024 aaKnown RBP17.1■□□□□ 0.33
CCDC84-208ENST00000534656 USP17L5A8MUK1 530 aa17.09■□□□□ 0.33
CCDC84-208ENST00000534656 GCLCP48506 637 aaPredicted RBP17.09■□□□□ 0.33
CCDC84-208ENST00000534656 HMGCS2P54868 508 aa17.09■□□□□ 0.33
CCDC84-208ENST00000534656 SH3D19Q5HYK7 790 aa17.09■□□□□ 0.33
CCDC84-208ENST00000534656 ATF7IPQ6VMQ6 1270 aa17.09■□□□□ 0.33
CCDC84-208ENST00000534656 DEFB118Q96PH6 123 aa17.09■□□□□ 0.33
CCDC84-208ENST00000534656 PRO3102Q9H379 93 aa17.09■□□□□ 0.33
CCDC84-208ENST00000534656 TAOK2Q9UL54 1235 aa17.09■□□□□ 0.33
CCDC84-208ENST00000534656 TNNQ9UQP3 1299 aa17.09■□□□□ 0.33
CCDC84-208ENST00000534656 ZBTB7BO15156 539 aaPredicted RBP17.08■□□□□ 0.32
CCDC84-208ENST00000534656 SH3RF3Q8TEJ3 882 aaPredicted RBP17.08■□□□□ 0.32
CCDC84-208ENST00000534656 FRAT1Q92837 279 aaPredicted RBP17.08■□□□□ 0.32
CCDC84-208ENST00000534656 NOL10Q9BSC4 688 aaKnown RBP17.08■□□□□ 0.32
CCDC84-208ENST00000534656 CRISPLD2Q9H0B8 497 aa17.08■□□□□ 0.32
CCDC84-208ENST00000534656 ASCC2Q9H1I8 757 aaPredicted RBP17.08■□□□□ 0.32
CCDC84-208ENST00000534656 DHX36Q9H2U1 1008 aaKnown RBP17.08■□□□□ 0.32
CCDC84-208ENST00000534656 AS3MTQ9HBK9 375 aa17.08■□□□□ 0.32
CCDC84-208ENST00000534656 PI4KBQ9UBF8 816 aa17.08■□□□□ 0.32
CCDC84-208ENST00000534656 LOC285556D6RIA3 1793 aa17.07■□□□□ 0.32
CCDC84-208ENST00000534656 CCER2I3L3R5 266 aa17.07■□□□□ 0.32
CCDC84-208ENST00000534656 BCAR3O75815 825 aa17.07■□□□□ 0.32
CCDC84-208ENST00000534656 BAG3O95817 575 aa17.07■□□□□ 0.32
CCDC84-208ENST00000534656 NAA16Q6N069 864 aaPredicted RBP17.07■□□□□ 0.32
CCDC84-208ENST00000534656 GPR108Q9NPR9 543 aa17.07■□□□□ 0.32
CCDC84-208ENST00000534656 EVI5O60447 810 aa17.06■□□□□ 0.32
CCDC84-208ENST00000534656 PLCG2P16885 1265 aa17.06■□□□□ 0.32
CCDC84-208ENST00000534656 CLUAP1Q96AJ1 413 aa17.06■□□□□ 0.32
CCDC84-208ENST00000534656 WDR18Q9BV38 432 aa17.06■□□□□ 0.32
CCDC84-208ENST00000534656 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.06■□□□□ 0.32
CCDC84-208ENST00000534656 SNRKQ9NRH2 765 aa17.06■□□□□ 0.32
CCDC84-208ENST00000534656 AATFQ9NY61 560 aaKnown RBP eCLIP17.06■□□□□ 0.32
CCDC84-208ENST00000534656 GJD2Q9UKL4 321 aa17.06■□□□□ 0.32
CCDC84-208ENST00000534656 PPP4CP60510 307 aa17.05■□□□□ 0.32
CCDC84-208ENST00000534656 POLA2Q14181 598 aa17.05■□□□□ 0.32
CCDC84-208ENST00000534656 TNNI3KQ59H18 835 aa17.05■□□□□ 0.32
CCDC84-208ENST00000534656 CCDC158Q5M9N0 1113 aa17.05■□□□□ 0.32
CCDC84-208ENST00000534656 TTC39AQ5SRH9 613 aa17.05■□□□□ 0.32
CCDC84-208ENST00000534656 METTL16Q86W50 562 aaKnown RBP17.05■□□□□ 0.32
CCDC84-208ENST00000534656 PAWRQ96IZ0 340 aaKnown RBP17.05■□□□□ 0.32
CCDC84-208ENST00000534656 MORF4L1Q9UBU8 362 aa17.05■□□□□ 0.32
CCDC84-208ENST00000534656 FPGT-TNNI3KV9GXZ4 949 aa17.05■□□□□ 0.32
CCDC84-208ENST00000534656 ATAD5Q96QE3 1844 aa17.05■□□□□ 0.32
CCDC84-208ENST00000534656 HMGCRP04035 888 aa17.04■□□□□ 0.32
CCDC84-208ENST00000534656 CYP2E1P05181 493 aaPredicted RBP17.04■□□□□ 0.32
CCDC84-208ENST00000534656 ASNSP08243 561 aa17.04■□□□□ 0.32
CCDC84-208ENST00000534656 HOXA7P31268 230 aaPredicted RBP17.04■□□□□ 0.32
CCDC84-208ENST00000534656 BACE1P56817 501 aa17.04■□□□□ 0.32
CCDC84-208ENST00000534656 MTMR2Q13614 643 aa17.04■□□□□ 0.32
CCDC84-208ENST00000534656 FOXP4Q8IVH2 680 aaPredicted RBP17.04■□□□□ 0.32
CCDC84-208ENST00000534656 TGFBRAP1Q8WUH2 860 aa17.04■□□□□ 0.32
CCDC84-208ENST00000534656 DBNDD2Q9BQY9 259 aa17.04■□□□□ 0.32
CCDC84-208ENST00000534656 RPTORQ8N122 1335 aa17.03■□□□□ 0.32
CCDC84-208ENST00000534656 IGSF3O75054 1194 aa17.03■□□□□ 0.32
CCDC84-208ENST00000534656 IRX3P78415 501 aaPredicted RBP17.03■□□□□ 0.32
CCDC84-208ENST00000534656 JAG1P78504 1218 aa17.03■□□□□ 0.32
CCDC84-208ENST00000534656 NECAB2Q7Z6G3 386 aa17.03■□□□□ 0.32
CCDC84-208ENST00000534656 ADGRA1Q86SQ6 560 aa17.03■□□□□ 0.32
CCDC84-208ENST00000534656 MAPKAPK5Q8IW41 473 aa17.03■□□□□ 0.32
CCDC84-208ENST00000534656 TMEM57Q8N5G2 664 aa17.03■□□□□ 0.32
CCDC84-208ENST00000534656 ANKLE1Q8NAG6 615 aa17.03■□□□□ 0.32
CCDC84-208ENST00000534656 SSH3Q8TE77 659 aa17.03■□□□□ 0.32
CCDC84-208ENST00000534656 ZNF512BQ96KM6 892 aaPredicted RBP17.03■□□□□ 0.32
CCDC84-208ENST00000534656 DNAJC18Q9H819 358 aa17.03■□□□□ 0.32
CCDC84-208ENST00000534656 TMOD4Q9NZQ9 345 aa17.03■□□□□ 0.32
CCDC84-208ENST00000534656 FLT1P17948 1338 aa17.02■□□□□ 0.32
CCDC84-208ENST00000534656 A0A1W2PPC1 479 aa17.02■□□□□ 0.32
CCDC84-208ENST00000534656 C19orf81C9J6K1 198 aa17.02■□□□□ 0.32
CCDC84-208ENST00000534656 ATP8B2P98198 1209 aa17.02■□□□□ 0.32
CCDC84-208ENST00000534656 OS9Q13438 667 aaPredicted RBP17.02■□□□□ 0.32
CCDC84-208ENST00000534656 CRACR2BQ8N4Y2 399 aaPredicted RBP17.02■□□□□ 0.32
CCDC84-208ENST00000534656 DIS3LQ8TF46 1054 aaKnown RBP17.02■□□□□ 0.32
CCDC84-208ENST00000534656 P2RX7Q99572 595 aaKnown RBP17.02■□□□□ 0.32
CCDC84-208ENST00000534656 HMX1Q9NP08 348 aaPredicted RBP17.02■□□□□ 0.32
CCDC84-208ENST00000534656 GINM1Q9NU53 330 aa17.02■□□□□ 0.32
CCDC84-208ENST00000534656 PALD1Q9ULE6 856 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms