RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 PANK1Q8TE04 598 aa15.43■□□□□ 0.06
USF1-211ENST00000534633 SMCR8Q8TEV9 937 aaPredicted RBP15.43■□□□□ 0.06
USF1-211ENST00000534633 TBC1D2Q9BYX2 928 aa15.43■□□□□ 0.06
USF1-211ENST00000534633 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.43■□□□□ 0.06
USF1-211ENST00000534633 BIN2Q9UBW5 565 aaPredicted RBP15.43■□□□□ 0.06
USF1-211ENST00000534633 AGTPBP1Q9UPW5 1226 aa15.43■□□□□ 0.06
USF1-211ENST00000534633 MCAMP43121 646 aa15.42■□□□□ 0.06
USF1-211ENST00000534633 C20orf194Q5TEA3 1177 aa15.42■□□□□ 0.06
USF1-211ENST00000534633 PROCA1Q8NCQ7 364 aaPredicted RBP15.42■□□□□ 0.06
USF1-211ENST00000534633 RNF208Q9H0X6 261 aa15.42■□□□□ 0.06
USF1-211ENST00000534633 RAI14Q9P0K7 980 aa15.42■□□□□ 0.06
USF1-211ENST00000534633 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.42■□□□□ 0.06
USF1-211ENST00000534633 PNMA3Q9UL41 463 aa15.42■□□□□ 0.06
USF1-211ENST00000534633 GABRQQ9UN88 632 aa15.42■□□□□ 0.06
USF1-211ENST00000534633 FAM196BA6NMK8 535 aa15.41■□□□□ 0.06
USF1-211ENST00000534633 TNPO2O14787 897 aaKnown RBP15.41■□□□□ 0.06
USF1-211ENST00000534633 ZBTB7BO15156 539 aaPredicted RBP15.41■□□□□ 0.06
USF1-211ENST00000534633 ADCY3O60266 1144 aa15.41■□□□□ 0.06
USF1-211ENST00000534633 FLT3LGP49771 235 aa15.41■□□□□ 0.06
USF1-211ENST00000534633 FXR1P51114 621 aaKnown RBP eCLIP15.41■□□□□ 0.06
USF1-211ENST00000534633 LRP2BPQ9P2M1 347 aa15.41■□□□□ 0.06
USF1-211ENST00000534633 COLQQ9Y215 455 aaPredicted RBP15.41■□□□□ 0.06
USF1-211ENST00000534633 H0YGN5 161 aa15.4■□□□□ 0.06
USF1-211ENST00000534633 CAPN2P17655 700 aa15.4■□□□□ 0.06
USF1-211ENST00000534633 CAP2P40123 477 aa15.4■□□□□ 0.06
USF1-211ENST00000534633 IRF5Q13568 498 aa15.4■□□□□ 0.06
USF1-211ENST00000534633 UBE2Q1Q7Z7E8 422 aa15.4■□□□□ 0.06
USF1-211ENST00000534633 CCDC84Q86UT8 332 aaPredicted RBP15.4■□□□□ 0.06
USF1-211ENST00000534633 TEX11Q8IYF3 940 aa15.4■□□□□ 0.06
USF1-211ENST00000534633 ZNF280CQ8ND82 737 aa15.4■□□□□ 0.06
USF1-211ENST00000534633 PXYLP1Q8TE99 480 aa15.4■□□□□ 0.06
USF1-211ENST00000534633 NOL10Q9BSC4 688 aaKnown RBP15.4■□□□□ 0.06
USF1-211ENST00000534633 HTATIP2Q9BUP3 242 aa15.4■□□□□ 0.06
USF1-211ENST00000534633 GPR108Q9NPR9 543 aa15.4■□□□□ 0.06
USF1-211ENST00000534633 HERC5Q9UII4 1024 aaKnown RBP15.4■□□□□ 0.06
USF1-211ENST00000534633 MYH1P12882 1939 aa15.39■□□□□ 0.05
USF1-211ENST00000534633 TRIOBPQ9H2D6 2365 aa15.39■□□□□ 0.05
USF1-211ENST00000534633 SPP2Q13103 211 aa15.39■□□□□ 0.05
USF1-211ENST00000534633 PABPC4Q13310 644 aaKnown RBP eCLIP15.39■□□□□ 0.05
USF1-211ENST00000534633 FAM110CQ1W6H9 321 aa15.39■□□□□ 0.05
USF1-211ENST00000534633 TREML2Q5T2D2 321 aa15.39■□□□□ 0.05
USF1-211ENST00000534633 U2AF1L4Q8WU68 220 aaKnown RBP15.39■□□□□ 0.05
USF1-211ENST00000534633 COA7Q96BR5 231 aa15.39■□□□□ 0.05
USF1-211ENST00000534633 DHX36Q9H2U1 1008 aaKnown RBP15.39■□□□□ 0.05
USF1-211ENST00000534633 USP17L5A8MUK1 530 aa15.38■□□□□ 0.05
USF1-211ENST00000534633 IGSF3O75054 1194 aa15.38■□□□□ 0.05
USF1-211ENST00000534633 BAG3O95817 575 aa15.38■□□□□ 0.05
USF1-211ENST00000534633 PLCG2P16885 1265 aa15.38■□□□□ 0.05
USF1-211ENST00000534633 GCLCP48506 637 aaPredicted RBP15.38■□□□□ 0.05
USF1-211ENST00000534633 POLA2Q14181 598 aa15.38■□□□□ 0.05
USF1-211ENST00000534633 TNNI3KQ59H18 835 aa15.38■□□□□ 0.05
USF1-211ENST00000534633 CCDC158Q5M9N0 1113 aa15.38■□□□□ 0.05
USF1-211ENST00000534633 TTC39AQ5SRH9 613 aa15.38■□□□□ 0.05
USF1-211ENST00000534633 NAA16Q6N069 864 aaPredicted RBP15.38■□□□□ 0.05
USF1-211ENST00000534633 FTSJ3Q8IY81 847 aaKnown RBP15.38■□□□□ 0.05
USF1-211ENST00000534633 ANKRD13CQ8N6S4 541 aa15.38■□□□□ 0.05
USF1-211ENST00000534633 SH3RF3Q8TEJ3 882 aaPredicted RBP15.38■□□□□ 0.05
USF1-211ENST00000534633 DPF3Q92784 378 aa15.38■□□□□ 0.05
USF1-211ENST00000534633 UNC93B1Q9H1C4 597 aa15.38■□□□□ 0.05
USF1-211ENST00000534633 AS3MTQ9HBK9 375 aa15.38■□□□□ 0.05
USF1-211ENST00000534633 PI4KBQ9UBF8 816 aa15.38■□□□□ 0.05
USF1-211ENST00000534633 FPGT-TNNI3KV9GXZ4 949 aa15.38■□□□□ 0.05
USF1-211ENST00000534633 PLXNB2O15031 1838 aa15.38■□□□□ 0.05
USF1-211ENST00000534633 ALPK3Q96L96 1907 aa15.37■□□□□ 0.05
USF1-211ENST00000534633 SGPL1O95470 568 aa15.37■□□□□ 0.05
USF1-211ENST00000534633 INHAP05111 366 aa15.37■□□□□ 0.05
USF1-211ENST00000534633 ELNP15502 786 aa15.37■□□□□ 0.05
USF1-211ENST00000534633 HMGCS2P54868 508 aa15.37■□□□□ 0.05
USF1-211ENST00000534633 SH3D19Q5HYK7 790 aa15.37■□□□□ 0.05
USF1-211ENST00000534633 SSH3Q8TE77 659 aa15.37■□□□□ 0.05
USF1-211ENST00000534633 ZNF512BQ96KM6 892 aaPredicted RBP15.37■□□□□ 0.05
USF1-211ENST00000534633 AATFQ9NY61 560 aaKnown RBP eCLIP15.37■□□□□ 0.05
USF1-211ENST00000534633 FARP2O94887 1054 aaPredicted RBP15.36■□□□□ 0.05
USF1-211ENST00000534633 PPP4CP60510 307 aa15.36■□□□□ 0.05
USF1-211ENST00000534633 ATP8B2P98198 1209 aa15.36■□□□□ 0.05
USF1-211ENST00000534633 OS9Q13438 667 aaPredicted RBP15.36■□□□□ 0.05
USF1-211ENST00000534633 RRP1BQ14684 758 aaKnown RBP15.36■□□□□ 0.05
USF1-211ENST00000534633 DBNDD2Q9BQY9 259 aa15.36■□□□□ 0.05
USF1-211ENST00000534633 SNRKQ9NRH2 765 aa15.36■□□□□ 0.05
USF1-211ENST00000534633 COG6Q9Y2V7 657 aa15.36■□□□□ 0.05
USF1-211ENST00000534633 CYP2E1P05181 493 aaPredicted RBP15.35■□□□□ 0.05
USF1-211ENST00000534633 ASNSP08243 561 aa15.35■□□□□ 0.05
USF1-211ENST00000534633 PDE3AQ14432 1141 aa15.35■□□□□ 0.05
USF1-211ENST00000534633 ITPRIPQ8IWB1 547 aa15.35■□□□□ 0.05
USF1-211ENST00000534633 WDR18Q9BV38 432 aa15.35■□□□□ 0.05
USF1-211ENST00000534633 ASCC2Q9H1I8 757 aaPredicted RBP15.35■□□□□ 0.05
USF1-211ENST00000534633 PAK6Q9NQU5 681 aaPredicted RBP15.35■□□□□ 0.05
USF1-211ENST00000534633 NR2E3Q9Y5X4 410 aa15.35■□□□□ 0.05
USF1-211ENST00000534633 FLT1P17948 1338 aa15.35■□□□□ 0.05
USF1-211ENST00000534633 SURF6O75683 361 aaKnown RBP15.34■□□□□ 0.05
USF1-211ENST00000534633 MS4A1P11836 297 aa15.34■□□□□ 0.05
USF1-211ENST00000534633 RRP1P56182 461 aaKnown RBP15.34■□□□□ 0.05
USF1-211ENST00000534633 CHRDL2Q6WN34 429 aa15.34■□□□□ 0.05
USF1-211ENST00000534633 METTL16Q86W50 562 aaKnown RBP15.34■□□□□ 0.05
USF1-211ENST00000534633 FOXP4Q8IVH2 680 aaPredicted RBP15.34■□□□□ 0.05
USF1-211ENST00000534633 TGFBRAP1Q8WUH2 860 aa15.34■□□□□ 0.05
USF1-211ENST00000534633 DEFB118Q96PH6 123 aa15.34■□□□□ 0.05
USF1-211ENST00000534633 GINM1Q9NU53 330 aa15.34■□□□□ 0.05
USF1-211ENST00000534633 TAOK2Q9UL54 1235 aa15.34■□□□□ 0.05
USF1-211ENST00000534633 RANBP2P49792 3224 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms