RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 COL6A3P12111 3177 aa10.72□□□□□ -0.69
COPB1-210ENST00000533533 PNMA6EA0A0J9YXQ4 647 aa10.71□□□□□ -0.69
COPB1-210ENST00000533533 ADCY3O60266 1144 aa10.71□□□□□ -0.69
COPB1-210ENST00000533533 FARP2O94887 1054 aaPredicted RBP10.71□□□□□ -0.69
COPB1-210ENST00000533533 SGPL1O95470 568 aa10.71□□□□□ -0.69
COPB1-210ENST00000533533 FLT3LGP49771 235 aa10.71□□□□□ -0.69
COPB1-210ENST00000533533 OS9Q13438 667 aaPredicted RBP10.71□□□□□ -0.69
COPB1-210ENST00000533533 RASGRF1Q13972 1273 aa10.71□□□□□ -0.69
COPB1-210ENST00000533533 PDE3AQ14432 1141 aa10.71□□□□□ -0.69
COPB1-210ENST00000533533 PDS5AQ29RF7 1337 aaKnown RBP10.71□□□□□ -0.69
COPB1-210ENST00000533533 DZIP1Q86YF9 867 aaKnown RBP10.71□□□□□ -0.69
COPB1-210ENST00000533533 PXYLP1Q8TE99 480 aa10.71□□□□□ -0.69
COPB1-210ENST00000533533 SMCR8Q8TEV9 937 aaPredicted RBP10.71□□□□□ -0.69
COPB1-210ENST00000533533 DDX4Q9NQI0 724 aaKnown RBP10.71□□□□□ -0.69
COPB1-210ENST00000533533 ABCF2Q9UG63 623 aa10.71□□□□□ -0.69
COPB1-210ENST00000533533 NR2E3Q9Y5X4 410 aa10.71□□□□□ -0.69
COPB1-210ENST00000533533 TRIM75PA6NK02 468 aa10.7□□□□□ -0.7
COPB1-210ENST00000533533 SLURP2P0DP57 97 aa10.7□□□□□ -0.7
COPB1-210ENST00000533533 ELNP15502 786 aa10.7□□□□□ -0.7
COPB1-210ENST00000533533 BTDP43251 543 aa10.7□□□□□ -0.7
COPB1-210ENST00000533533 RRP1P56182 461 aaKnown RBP10.7□□□□□ -0.7
COPB1-210ENST00000533533 TIMM10P62072 90 aa10.7□□□□□ -0.7
COPB1-210ENST00000533533 G3BP1Q13283 466 aaKnown RBP eCLIP10.7□□□□□ -0.7
COPB1-210ENST00000533533 PICALMQ13492 652 aa10.7□□□□□ -0.7
COPB1-210ENST00000533533 IRF5Q13568 498 aa10.7□□□□□ -0.7
COPB1-210ENST00000533533 SPTY2D1Q68D10 685 aaPredicted RBP10.7□□□□□ -0.7
COPB1-210ENST00000533533 PRO3102Q9H379 93 aa10.7□□□□□ -0.7
COPB1-210ENST00000533533 CHMP4BQ9H444 224 aaKnown RBP10.7□□□□□ -0.7
COPB1-210ENST00000533533 ALPK3Q96L96 1907 aa10.7□□□□□ -0.7
COPB1-210ENST00000533533 ATAD5Q96QE3 1844 aa10.7□□□□□ -0.7
COPB1-210ENST00000533533 MROH7-TTC4A0A0A0MT08 1334 aa10.69□□□□□ -0.7
COPB1-210ENST00000533533 GPR75-ASB3A0A0A6YYF3 556 aa10.69□□□□□ -0.7
COPB1-210ENST00000533533 TNPO2O14787 897 aaKnown RBP10.69□□□□□ -0.7
COPB1-210ENST00000533533 TBC1D12O60347 775 aa10.69□□□□□ -0.7
COPB1-210ENST00000533533 SURF6O75683 361 aaKnown RBP10.69□□□□□ -0.7
COPB1-210ENST00000533533 INHAP05111 366 aa10.69□□□□□ -0.7
COPB1-210ENST00000533533 CAPN2P17655 700 aa10.69□□□□□ -0.7
COPB1-210ENST00000533533 RHBDL3P58872 404 aa10.69□□□□□ -0.7
COPB1-210ENST00000533533 ATP8B2P98198 1209 aa10.69□□□□□ -0.7
COPB1-210ENST00000533533 MTX1Q13505 466 aa10.69□□□□□ -0.7
COPB1-210ENST00000533533 XAGE2Q96GT9 111 aa10.69□□□□□ -0.7
COPB1-210ENST00000533533 BCL11AQ9H165 835 aa10.69□□□□□ -0.7
COPB1-210ENST00000533533 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.69□□□□□ -0.7
COPB1-210ENST00000533533 AGTPBP1Q9UPW5 1226 aa10.69□□□□□ -0.7
COPB1-210ENST00000533533 LOC285556D6RIA3 1793 aa10.68□□□□□ -0.7
COPB1-210ENST00000533533 A0A1B0GUL7 405 aa10.68□□□□□ -0.7
COPB1-210ENST00000533533 TFRCP02786 760 aaKnown RBP10.68□□□□□ -0.7
COPB1-210ENST00000533533 MECOMQ03112 1051 aa10.68□□□□□ -0.7
COPB1-210ENST00000533533 FAM110CQ1W6H9 321 aa10.68□□□□□ -0.7
COPB1-210ENST00000533533 TREML2Q5T2D2 321 aa10.68□□□□□ -0.7
COPB1-210ENST00000533533 CEP85Q6P2H3 762 aa10.68□□□□□ -0.7
COPB1-210ENST00000533533 ERICH6Q7L0X2 663 aa10.68□□□□□ -0.7
COPB1-210ENST00000533533 CCDC84Q86UT8 332 aaPredicted RBP10.68□□□□□ -0.7
COPB1-210ENST00000533533 ANKRD13CQ8N6S4 541 aa10.68□□□□□ -0.7
COPB1-210ENST00000533533 ZNF384Q8TF68 577 aa10.68□□□□□ -0.7
COPB1-210ENST00000533533 COA7Q96BR5 231 aa10.68□□□□□ -0.7
COPB1-210ENST00000533533 DEFB118Q96PH6 123 aa10.68□□□□□ -0.7
COPB1-210ENST00000533533 PAK6Q9NQU5 681 aaPredicted RBP10.68□□□□□ -0.7
COPB1-210ENST00000533533 PNMA3Q9UL41 463 aa10.68□□□□□ -0.7
COPB1-210ENST00000533533 AKAP2Q9Y2D5 859 aa10.68□□□□□ -0.7
COPB1-210ENST00000533533 EVI5O60447 810 aa10.67□□□□□ -0.7
COPB1-210ENST00000533533 MAP4K4O95819 1239 aaPredicted RBP10.67□□□□□ -0.7
COPB1-210ENST00000533533 TFCP2Q12800 502 aa10.67□□□□□ -0.7
COPB1-210ENST00000533533 PROCA1Q8NCQ7 364 aaPredicted RBP10.67□□□□□ -0.7
COPB1-210ENST00000533533 NEUROD6Q96NK8 337 aa10.67□□□□□ -0.7
COPB1-210ENST00000533533 CRISPLD2Q9H0B8 497 aa10.67□□□□□ -0.7
COPB1-210ENST00000533533 OSBPL5Q9H0X9 879 aaPredicted RBP10.67□□□□□ -0.7
COPB1-210ENST00000533533 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.67□□□□□ -0.7
COPB1-210ENST00000533533 ZBTB40Q9NUA8 1239 aa10.67□□□□□ -0.7
COPB1-210ENST00000533533 TAOK2Q9UL54 1235 aa10.67□□□□□ -0.7
COPB1-210ENST00000533533 A0A1W2PPC1 479 aa10.66□□□□□ -0.7
COPB1-210ENST00000533533 FAM196BA6NMK8 535 aa10.66□□□□□ -0.7
COPB1-210ENST00000533533 APBB1O00213 710 aa10.66□□□□□ -0.7
COPB1-210ENST00000533533 HMMRO75330 724 aa10.66□□□□□ -0.7
COPB1-210ENST00000533533 LDHCP07864 332 aa10.66□□□□□ -0.7
COPB1-210ENST00000533533 GCLCP48506 637 aaPredicted RBP10.66□□□□□ -0.7
COPB1-210ENST00000533533 GSTO1P78417 241 aa10.66□□□□□ -0.7
COPB1-210ENST00000533533 SPP2Q13103 211 aa10.66□□□□□ -0.7
COPB1-210ENST00000533533 GORABQ5T7V8 394 aa10.66□□□□□ -0.7
COPB1-210ENST00000533533 ZNF280CQ8ND82 737 aa10.66□□□□□ -0.7
COPB1-210ENST00000533533 SSH3Q8TE77 659 aa10.66□□□□□ -0.7
COPB1-210ENST00000533533 NSUN4Q96CB9 384 aaKnown RBP10.66□□□□□ -0.7
COPB1-210ENST00000533533 HMG20BQ9P0W2 317 aa10.66□□□□□ -0.7
COPB1-210ENST00000533533 COL2A1P02458 1487 aaPredicted RBP10.66□□□□□ -0.7
COPB1-210ENST00000533533 CAP2P40123 477 aa10.65□□□□□ -0.7
COPB1-210ENST00000533533 HMGCS2P54868 508 aa10.65□□□□□ -0.7
COPB1-210ENST00000533533 PABPC4Q13310 644 aaKnown RBP eCLIP10.65□□□□□ -0.7
COPB1-210ENST00000533533 PI16Q6UXB8 463 aa10.65□□□□□ -0.7
COPB1-210ENST00000533533 TBC1D9Q6ZT07 1266 aa10.65□□□□□ -0.7
COPB1-210ENST00000533533 SPATA5Q8NB90 893 aa10.65□□□□□ -0.7
COPB1-210ENST00000533533 PAWRQ96IZ0 340 aaKnown RBP10.65□□□□□ -0.7
COPB1-210ENST00000533533 CRBNQ96SW2 442 aa10.65□□□□□ -0.7
COPB1-210ENST00000533533 TBC1D2Q9BYX2 928 aa10.65□□□□□ -0.7
COPB1-210ENST00000533533 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.65□□□□□ -0.7
COPB1-210ENST00000533533 EXOC6BQ9Y2D4 811 aa10.65□□□□□ -0.7
COPB1-210ENST00000533533 SUPT16HQ9Y5B9 1047 aaKnown RBP10.65□□□□□ -0.7
COPB1-210ENST00000533533 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.65□□□□□ -0.7
COPB1-210ENST00000533533 CDK5RAP2Q96SN8 1893 aa10.65□□□□□ -0.7
COPB1-210ENST00000533533 PLXNB2O15031 1838 aa10.65□□□□□ -0.71
COPB1-210ENST00000533533 MYO5AQ9Y4I1 1855 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms