RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 UQCRFS1P1P0C7P4 283 aa19.04■□□□□ 0.64
CTSB-228ENST00000533455 UBXN6Q9BZV1 441 aa19.04■□□□□ 0.64
CTSB-228ENST00000533455 ANKRD18BA2A2Z9 1011 aa19.03■□□□□ 0.64
CTSB-228ENST00000533455 CASQ1P31415 396 aa19.03■□□□□ 0.64
CTSB-228ENST00000533455 CYP2C19P33261 490 aa19.03■□□□□ 0.64
CTSB-228ENST00000533455 FMR1Q06787 632 aaKnown RBP eCLIP19.03■□□□□ 0.64
CTSB-228ENST00000533455 SAFBQ15424 915 aaKnown RBP eCLIP19.03■□□□□ 0.64
CTSB-228ENST00000533455 RILPL1Q5EBL4 403 aa19.03■□□□□ 0.64
CTSB-228ENST00000533455 MYL10Q9BUA6 226 aa19.03■□□□□ 0.64
CTSB-228ENST00000533455 FOXP1Q9H334 677 aaPredicted RBP19.03■□□□□ 0.64
CTSB-228ENST00000533455 GREM2Q9H772 168 aa19.03■□□□□ 0.64
CTSB-228ENST00000533455 WWC3Q9ULE0 1092 aa19.03■□□□□ 0.64
CTSB-228ENST00000533455 NFE2L3Q9Y4A8 694 aa19.03■□□□□ 0.64
CTSB-228ENST00000533455 MRFAP1Q9Y605 127 aa19.03■□□□□ 0.64
CTSB-228ENST00000533455 BCORQ6W2J9 1755 aa19.03■□□□□ 0.64
CTSB-228ENST00000533455 PATL2C9JE40 543 aaKnown RBP19.03■□□□□ 0.64
CTSB-228ENST00000533455 CTSWP56202 376 aa19.03■□□□□ 0.64
CTSB-228ENST00000533455 GIGYF2Q6Y7W6 1299 aaKnown RBP19.03■□□□□ 0.64
CTSB-228ENST00000533455 TOM1L2Q6ZVM7 507 aa19.03■□□□□ 0.64
CTSB-228ENST00000533455 GPR161Q8N6U8 529 aaKnown RBP19.03■□□□□ 0.64
CTSB-228ENST00000533455 KIFC2Q96AC6 838 aa19.03■□□□□ 0.64
CTSB-228ENST00000533455 TEX13AQ9BXU3 409 aaPredicted RBP19.03■□□□□ 0.64
CTSB-228ENST00000533455 CNNM2Q9H8M5 875 aa19.03■□□□□ 0.64
CTSB-228ENST00000533455 EPB41L4AQ9HCS5 686 aaPredicted RBP19.03■□□□□ 0.64
CTSB-228ENST00000533455 CNNM1Q9NRU3 951 aa19.03■□□□□ 0.64
CTSB-228ENST00000533455 MYH6P13533 1939 aa19.02■□□□□ 0.64
CTSB-228ENST00000533455 BTBD18B2RXH4 712 aa19.02■□□□□ 0.64
CTSB-228ENST00000533455 UBE2Q2LH0YL09 131 aa19.02■□□□□ 0.64
CTSB-228ENST00000533455 IFIT3O14879 490 aaKnown RBP19.02■□□□□ 0.64
CTSB-228ENST00000533455 PDE8BO95263 885 aa19.02■□□□□ 0.64
CTSB-228ENST00000533455 PRR29P0C7W0 189 aa19.02■□□□□ 0.64
CTSB-228ENST00000533455 PTPN21Q16825 1174 aa19.02■□□□□ 0.64
CTSB-228ENST00000533455 RSRC2Q7L4I2 434 aaKnown RBP19.02■□□□□ 0.64
CTSB-228ENST00000533455 NUTM2AQ8IVF1 878 aaPredicted RBP19.02■□□□□ 0.64
CTSB-228ENST00000533455 DIS3L2Q8IYB7 885 aaKnown RBP19.02■□□□□ 0.64
CTSB-228ENST00000533455 SMARCE1Q969G3 411 aa19.02■□□□□ 0.64
CTSB-228ENST00000533455 AIDAQ96BJ3 306 aa19.02■□□□□ 0.64
CTSB-228ENST00000533455 WDR24Q96S15 920 aa19.02■□□□□ 0.64
CTSB-228ENST00000533455 IL2RBP14784 551 aa19.01■□□□□ 0.63
CTSB-228ENST00000533455 PHKA1P46020 1223 aa19.01■□□□□ 0.63
CTSB-228ENST00000533455 GNG11P61952 73 aa19.01■□□□□ 0.63
CTSB-228ENST00000533455 KANK3Q6NY19 840 aa19.01■□□□□ 0.63
CTSB-228ENST00000533455 NLRP10Q86W26 655 aa19.01■□□□□ 0.63
CTSB-228ENST00000533455 IFNL3Q8IZI9 196 aa19.01■□□□□ 0.63
CTSB-228ENST00000533455 SPATA20Q8TB22 786 aa19.01■□□□□ 0.63
CTSB-228ENST00000533455 KRT23Q9C075 422 aa19.01■□□□□ 0.63
CTSB-228ENST00000533455 RAI14Q9P0K7 980 aa19.01■□□□□ 0.63
CTSB-228ENST00000533455 ZSWIM5Q9P217 1185 aa19.01■□□□□ 0.63
CTSB-228ENST00000533455 SERTAD1Q9UHV2 236 aa19.01■□□□□ 0.63
CTSB-228ENST00000533455 PPP2R3AQ06190 1150 aa19.01■□□□□ 0.63
CTSB-228ENST00000533455 CT47A1Q5JQC4 288 aaPredicted RBP19.01■□□□□ 0.63
CTSB-228ENST00000533455 TOGARAM2Q6ZUX3 1019 aa19.01■□□□□ 0.63
CTSB-228ENST00000533455 MTA3Q9BTC8 594 aa19.01■□□□□ 0.63
CTSB-228ENST00000533455 POLR2DO15514 142 aaKnown RBP19■□□□□ 0.63
CTSB-228ENST00000533455 ACTN4O43707 911 aaKnown RBP19■□□□□ 0.63
CTSB-228ENST00000533455 CDK11BP21127 795 aaKnown RBP19■□□□□ 0.63
CTSB-228ENST00000533455 ERCC5P28715 1186 aaPredicted RBP19■□□□□ 0.63
CTSB-228ENST00000533455 GUCY1A2P33402 732 aa19■□□□□ 0.63
CTSB-228ENST00000533455 PLCD1P51178 756 aa19■□□□□ 0.63
CTSB-228ENST00000533455 RCAN1P53805 252 aa19■□□□□ 0.63
CTSB-228ENST00000533455 GRIN1Q05586 938 aa19■□□□□ 0.63
CTSB-228ENST00000533455 SPECC1Q5M775 1068 aa19■□□□□ 0.63
CTSB-228ENST00000533455 AKNAD1Q5T1N1 836 aa19■□□□□ 0.63
CTSB-228ENST00000533455 CC2D1AQ6P1N0 951 aaPredicted RBP19■□□□□ 0.63
CTSB-228ENST00000533455 TRIM22Q8IYM9 498 aa19■□□□□ 0.63
CTSB-228ENST00000533455 SYNE4Q8N205 404 aa19■□□□□ 0.63
CTSB-228ENST00000533455 PDILTQ8N807 584 aa19■□□□□ 0.63
CTSB-228ENST00000533455 NAPBQ9H115 298 aa19■□□□□ 0.63
CTSB-228ENST00000533455 ZNF330Q9Y3S2 320 aaPredicted RBP19■□□□□ 0.63
CTSB-228ENST00000533455 SRPRBQ9Y5M8 271 aaKnown RBP19■□□□□ 0.63
CTSB-228ENST00000533455 TACC3Q9Y6A5 838 aa19■□□□□ 0.63
CTSB-228ENST00000533455 A0A1B0GTH6 734 aa19■□□□□ 0.63
CTSB-228ENST00000533455 NR1I3Q14994 352 aa19■□□□□ 0.63
CTSB-228ENST00000533455 MED15Q96RN5 788 aa19■□□□□ 0.63
CTSB-228ENST00000533455 ZKSCAN7Q9P0L1 754 aaPredicted RBP19■□□□□ 0.63
CTSB-228ENST00000533455 CALCOCO1Q9P1Z2 691 aa19■□□□□ 0.63
CTSB-228ENST00000533455 CEP131Q9UPN4 1083 aa19■□□□□ 0.63
CTSB-228ENST00000533455 NUP98P52948 1817 aa18.99■□□□□ 0.63
CTSB-228ENST00000533455 COL22A1Q8NFW1 1626 aaPredicted RBP18.99■□□□□ 0.63
CTSB-228ENST00000533455 DEXIO95424 95 aa18.99■□□□□ 0.63
CTSB-228ENST00000533455 TBC1D8O95759 1140 aa18.99■□□□□ 0.63
CTSB-228ENST00000533455 FGFR2P21802 821 aa18.99■□□□□ 0.63
CTSB-228ENST00000533455 ADKP55263 362 aaKnown RBP18.99■□□□□ 0.63
CTSB-228ENST00000533455 CTDSPL2Q05D32 466 aa18.99■□□□□ 0.63
CTSB-228ENST00000533455 RTN1Q16799 776 aa18.99■□□□□ 0.63
CTSB-228ENST00000533455 CADPS2Q86UW7 1296 aa18.99■□□□□ 0.63
CTSB-228ENST00000533455 DNAJC10Q8IXB1 793 aa18.99■□□□□ 0.63
CTSB-228ENST00000533455 RABGGTAQ92696 567 aa18.99■□□□□ 0.63
CTSB-228ENST00000533455 PANX2Q96RD6 677 aa18.99■□□□□ 0.63
CTSB-228ENST00000533455 CARD10Q9BWT7 1032 aa18.99■□□□□ 0.63
CTSB-228ENST00000533455 INCENPQ9NQS7 918 aa18.99■□□□□ 0.63
CTSB-228ENST00000533455 PLCH1Q4KWH8 1693 aa18.99■□□□□ 0.63
CTSB-228ENST00000533455 SEC31AO94979 1220 aaKnown RBP18.98■□□□□ 0.63
CTSB-228ENST00000533455 STAG1Q8WVM7 1258 aa18.98■□□□□ 0.63
CTSB-228ENST00000533455 TMOD3Q9NYL9 352 aa18.98■□□□□ 0.63
CTSB-228ENST00000533455 TAOK2Q9UL54 1235 aa18.98■□□□□ 0.63
CTSB-228ENST00000533455 KCNJ14Q9UNX9 436 aa18.98■□□□□ 0.63
CTSB-228ENST00000533455 ABCA3Q99758 1704 aa18.98■□□□□ 0.63
CTSB-228ENST00000533455 MBD4O95243 580 aa18.98■□□□□ 0.63
CTSB-228ENST00000533455 PUM3Q15397 648 aaKnown RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms