RNA–Protein interactions for RNA: ENST00000533451.1

UBASH3B-208, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 2

Gene UBASH3B, Length 1,032 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-208ENST00000533451 PPP4CP60510 307 aa13.86□□□□□ -0.19
UBASH3B-208ENST00000533451 ZSCAN25Q6NSZ9 544 aa13.86□□□□□ -0.19
UBASH3B-208ENST00000533451 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.86□□□□□ -0.19
UBASH3B-208ENST00000533451 CERS3Q8IU89 383 aa13.86□□□□□ -0.19
UBASH3B-208ENST00000533451 CRACR2BQ8N4Y2 399 aaPredicted RBP13.86□□□□□ -0.19
UBASH3B-208ENST00000533451 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.86□□□□□ -0.19
UBASH3B-208ENST00000533451 FLT1P17948 1338 aa13.86□□□□□ -0.19
UBASH3B-208ENST00000533451 TTC41PQ6P2S7 1318 aa13.86□□□□□ -0.19
UBASH3B-208ENST00000533451 UNCXA6NJT0 531 aa13.85□□□□□ -0.19
UBASH3B-208ENST00000533451 CA12O43570 354 aa13.85□□□□□ -0.19
UBASH3B-208ENST00000533451 IGHDP01880 384 aa13.85□□□□□ -0.19
UBASH3B-208ENST00000533451 ZBTB48P10074 688 aaPredicted RBP13.85□□□□□ -0.19
UBASH3B-208ENST00000533451 SH3BP5LQ7L8J4 393 aa13.85□□□□□ -0.19
UBASH3B-208ENST00000533451 MS4A3Q96HJ5 214 aa13.85□□□□□ -0.19
UBASH3B-208ENST00000533451 CRNKL1Q9BZJ0 848 aaKnown RBP13.85□□□□□ -0.19
UBASH3B-208ENST00000533451 GLRX3O76003 335 aaKnown RBP13.84□□□□□ -0.19
UBASH3B-208ENST00000533451 MBD4O95243 580 aa13.84□□□□□ -0.19
UBASH3B-208ENST00000533451 HLA-DOAP06340 250 aa13.84□□□□□ -0.19
UBASH3B-208ENST00000533451 SLURP2P0DP57 97 aa13.84□□□□□ -0.19
UBASH3B-208ENST00000533451 HSPA8P11142 646 aaKnown RBP13.84□□□□□ -0.19
UBASH3B-208ENST00000533451 SLFNL1Q499Z3 407 aa13.84□□□□□ -0.19
UBASH3B-208ENST00000533451 TMED8Q6PL24 325 aaPredicted RBP13.84□□□□□ -0.19
UBASH3B-208ENST00000533451 KIF12Q96FN5 646 aa13.84□□□□□ -0.19
UBASH3B-208ENST00000533451 FSD1Q9BTV5 496 aa13.84□□□□□ -0.19
UBASH3B-208ENST00000533451 ARMT1Q9H993 441 aa13.84□□□□□ -0.19
UBASH3B-208ENST00000533451 PICK1Q9NRD5 415 aa13.84□□□□□ -0.19
UBASH3B-208ENST00000533451 PALD1Q9ULE6 856 aa13.84□□□□□ -0.19
UBASH3B-208ENST00000533451 SNCAIPQ9Y6H5 919 aa13.84□□□□□ -0.19
UBASH3B-208ENST00000533451 PCNTO95613 3336 aa13.84□□□□□ -0.19
UBASH3B-208ENST00000533451 DOCK1Q14185 1865 aa13.84□□□□□ -0.19
UBASH3B-208ENST00000533451 ATRNL1Q5VV63 1379 aa13.83□□□□□ -0.19
UBASH3B-208ENST00000533451 COL2A1P02458 1487 aaPredicted RBP13.83□□□□□ -0.2
UBASH3B-208ENST00000533451 MANSC4A6NHS7 340 aaPredicted RBP13.83□□□□□ -0.2
UBASH3B-208ENST00000533451 ADD2P35612 726 aa13.83□□□□□ -0.2
UBASH3B-208ENST00000533451 ERO1BQ86YB8 467 aa13.83□□□□□ -0.2
UBASH3B-208ENST00000533451 LCORLQ8N3X6 602 aa13.83□□□□□ -0.2
UBASH3B-208ENST00000533451 DHX36Q9H2U1 1008 aaKnown RBP13.83□□□□□ -0.2
UBASH3B-208ENST00000533451 RNF186Q9NXI6 227 aa13.83□□□□□ -0.2
UBASH3B-208ENST00000533451 CASP8AP2Q9UKL3 1982 aa13.83□□□□□ -0.2
UBASH3B-208ENST00000533451 ATAD5Q96QE3 1844 aa13.83□□□□□ -0.2
UBASH3B-208ENST00000533451 CCL15-CCL14A0A0B4J2E2 113 aa13.82□□□□□ -0.2
UBASH3B-208ENST00000533451 SPDYE5A6NIY4 337 aa13.82□□□□□ -0.2
UBASH3B-208ENST00000533451 POLR3DP05423 398 aaPredicted RBP13.82□□□□□ -0.2
UBASH3B-208ENST00000533451 GJA5P36382 358 aa13.82□□□□□ -0.2
UBASH3B-208ENST00000533451 CCL15Q16663 113 aa13.82□□□□□ -0.2
UBASH3B-208ENST00000533451 LRRFIP1Q32MZ4 808 aaKnown RBP13.82□□□□□ -0.2
UBASH3B-208ENST00000533451 SMC5Q8IY18 1101 aa13.82□□□□□ -0.2
UBASH3B-208ENST00000533451 SCYL3Q8IZE3 742 aa13.82□□□□□ -0.2
UBASH3B-208ENST00000533451 KBTBD3Q8NAB2 608 aa13.82□□□□□ -0.2
UBASH3B-208ENST00000533451 DDRGK1Q96HY6 314 aa13.82□□□□□ -0.2
UBASH3B-208ENST00000533451 RIOK1Q9BRS2 568 aaKnown RBP13.82□□□□□ -0.2
UBASH3B-208ENST00000533451 MCM9Q9NXL9 1143 aa13.82□□□□□ -0.2
UBASH3B-208ENST00000533451 PI4KBQ9UBF8 816 aa13.82□□□□□ -0.2
UBASH3B-208ENST00000533451 BAZ2AQ9UIF9 1905 aaKnown RBP13.82□□□□□ -0.2
UBASH3B-208ENST00000533451 TCRBV5S4A2TA0A5A2 114 aa13.81□□□□□ -0.2
UBASH3B-208ENST00000533451 CHGBP05060 677 aa13.81□□□□□ -0.2
UBASH3B-208ENST00000533451 GTF2A2P52657 109 aa13.81□□□□□ -0.2
UBASH3B-208ENST00000533451 UBE3CQ15386 1083 aa13.81□□□□□ -0.2
UBASH3B-208ENST00000533451 OTUD7BQ6GQQ9 843 aa13.81□□□□□ -0.2
UBASH3B-208ENST00000533451 CHD1LQ86WJ1 897 aa13.81□□□□□ -0.2
UBASH3B-208ENST00000533451 IFNLR1Q8IU57 520 aaPredicted RBP13.81□□□□□ -0.2
UBASH3B-208ENST00000533451 AMOTL1Q8IY63 956 aa13.81□□□□□ -0.2
UBASH3B-208ENST00000533451 PI4K2BQ8TCG2 481 aa13.81□□□□□ -0.2
UBASH3B-208ENST00000533451 SDR42E1Q8WUS8 393 aa13.81□□□□□ -0.2
UBASH3B-208ENST00000533451 SIPA1L1O43166 1804 aa13.8□□□□□ -0.2
UBASH3B-208ENST00000533451 TRIM6-TRIM34B2RNG4 842 aa13.8□□□□□ -0.2
UBASH3B-208ENST00000533451 IRF6O14896 467 aa13.8□□□□□ -0.2
UBASH3B-208ENST00000533451 RNF113AO15541 343 aaKnown RBP13.8□□□□□ -0.2
UBASH3B-208ENST00000533451 MAP3K13O43283 966 aa13.8□□□□□ -0.2
UBASH3B-208ENST00000533451 TBC1D8O95759 1140 aa13.8□□□□□ -0.2
UBASH3B-208ENST00000533451 NEFLP07196 543 aa13.8□□□□□ -0.2
UBASH3B-208ENST00000533451 PDE1AP54750 535 aa13.8□□□□□ -0.2
UBASH3B-208ENST00000533451 NUCB1Q02818 461 aa13.8□□□□□ -0.2
UBASH3B-208ENST00000533451 PPIL2Q13356 520 aa13.8□□□□□ -0.2
UBASH3B-208ENST00000533451 SNAPC2Q13487 334 aa13.8□□□□□ -0.2
UBASH3B-208ENST00000533451 COL13A1Q5TAT6 717 aaPredicted RBP13.8□□□□□ -0.2
UBASH3B-208ENST00000533451 TTC6Q86TZ1 520 aa13.8□□□□□ -0.2
UBASH3B-208ENST00000533451 IFNL1Q8IU54 200 aa13.8□□□□□ -0.2
UBASH3B-208ENST00000533451 SAGE1Q9NXZ1 904 aa13.8□□□□□ -0.2
UBASH3B-208ENST00000533451 HERC5Q9UII4 1024 aaKnown RBP13.8□□□□□ -0.2
UBASH3B-208ENST00000533451 ZNF112Q9UJU3 913 aa13.8□□□□□ -0.2
UBASH3B-208ENST00000533451 SLC4A4Q9Y6R1 1079 aa13.8□□□□□ -0.2
UBASH3B-208ENST00000533451 MYH8P13535 1937 aa13.8□□□□□ -0.2
UBASH3B-208ENST00000533451 PHF20L1A8MW92 1017 aa13.79□□□□□ -0.2
UBASH3B-208ENST00000533451 PRKAB2O43741 272 aa13.79□□□□□ -0.2
UBASH3B-208ENST00000533451 TBC1D12O60347 775 aa13.79□□□□□ -0.2
UBASH3B-208ENST00000533451 CTNND1O60716 968 aaKnown RBP13.79□□□□□ -0.2
UBASH3B-208ENST00000533451 GDF11O95390 407 aa13.79□□□□□ -0.2
UBASH3B-208ENST00000533451 ALDH1A1P00352 501 aa13.79□□□□□ -0.2
UBASH3B-208ENST00000533451 ZFYP08048 801 aaPredicted RBP13.79□□□□□ -0.2
UBASH3B-208ENST00000533451 CETPP11597 493 aa13.79□□□□□ -0.2
UBASH3B-208ENST00000533451 TM4SF4P48230 202 aa13.79□□□□□ -0.2
UBASH3B-208ENST00000533451 INHBEP58166 350 aa13.79□□□□□ -0.2
UBASH3B-208ENST00000533451 PPATQ06203 517 aa13.79□□□□□ -0.2
UBASH3B-208ENST00000533451 NOL9Q5SY16 702 aaKnown RBP13.79□□□□□ -0.2
UBASH3B-208ENST00000533451 PUS7LQ9H0K6 701 aaKnown RBP13.79□□□□□ -0.2
UBASH3B-208ENST00000533451 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.79□□□□□ -0.2
UBASH3B-208ENST00000533451 ZHX2Q9Y6X8 837 aa13.79□□□□□ -0.2
UBASH3B-208ENST00000533451 LAMB1P07942 1786 aa13.78□□□□□ -0.2
UBASH3B-208ENST00000533451 TRIM75PA6NK02 468 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms