RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 AMIGO3Q86WK7 504 aa17.72■□□□□ 0.43
CACNA1E-208ENST00000533229 DIS3L2Q8IYB7 885 aaKnown RBP17.72■□□□□ 0.43
CACNA1E-208ENST00000533229 PRIMPOLQ96LW4 560 aa17.72■□□□□ 0.43
CACNA1E-208ENST00000533229 COL5A3P25940 1745 aaPredicted RBP17.72■□□□□ 0.43
CACNA1E-208ENST00000533229 TNKSO95271 1327 aa17.72■□□□□ 0.43
CACNA1E-208ENST00000533229 CNTNAP4Q9C0A0 1308 aa17.72■□□□□ 0.43
CACNA1E-208ENST00000533229 DYNC1I1O14576 645 aa17.72■□□□□ 0.43
CACNA1E-208ENST00000533229 RBM6P78332 1123 aaKnown RBP17.72■□□□□ 0.43
CACNA1E-208ENST00000533229 RESP18Q5W5W9 173 aa17.72■□□□□ 0.43
CACNA1E-208ENST00000533229 LRRC8AQ8IWT6 810 aa17.72■□□□□ 0.43
CACNA1E-208ENST00000533229 TMTC2Q8N394 836 aa17.72■□□□□ 0.43
CACNA1E-208ENST00000533229 MTA3Q9BTC8 594 aa17.72■□□□□ 0.43
CACNA1E-208ENST00000533229 FAM13BQ9NYF5 915 aa17.72■□□□□ 0.43
CACNA1E-208ENST00000533229 TAF1P21675 1872 aa17.72■□□□□ 0.43
CACNA1E-208ENST00000533229 FAM237AA0A1B0GTK4 181 aa17.71■□□□□ 0.43
CACNA1E-208ENST00000533229 PRDM1O75626 825 aa17.71■□□□□ 0.43
CACNA1E-208ENST00000533229 NLRP12P59046 1061 aa17.71■□□□□ 0.43
CACNA1E-208ENST00000533229 FBXO33Q7Z6M2 555 aa17.71■□□□□ 0.43
CACNA1E-208ENST00000533229 TSC1Q92574 1164 aa17.71■□□□□ 0.43
CACNA1E-208ENST00000533229 SHISA4Q96DD7 197 aa17.71■□□□□ 0.43
CACNA1E-208ENST00000533229 TIGD1Q96MW7 591 aa17.71■□□□□ 0.43
CACNA1E-208ENST00000533229 C8orf37Q96NL8 207 aa17.71■□□□□ 0.43
CACNA1E-208ENST00000533229 BPIFA3Q9BQP9 254 aa17.71■□□□□ 0.43
CACNA1E-208ENST00000533229 UBAC1Q9BSL1 405 aa17.71■□□□□ 0.43
CACNA1E-208ENST00000533229 RPS8P62241 208 aaKnown RBP17.71■□□□□ 0.42
CACNA1E-208ENST00000533229 NR5A1Q13285 461 aa17.71■□□□□ 0.42
CACNA1E-208ENST00000533229 NCAPHQ15003 741 aa17.71■□□□□ 0.42
CACNA1E-208ENST00000533229 SPECC1Q5M775 1068 aa17.71■□□□□ 0.42
CACNA1E-208ENST00000533229 TRIM22Q8IYM9 498 aa17.71■□□□□ 0.42
CACNA1E-208ENST00000533229 JMYQ8N9B5 988 aa17.71■□□□□ 0.42
CACNA1E-208ENST00000533229 WASF1Q92558 559 aa17.71■□□□□ 0.42
CACNA1E-208ENST00000533229 ESR2Q92731 530 aa17.71■□□□□ 0.42
CACNA1E-208ENST00000533229 NARFQ9UHQ1 456 aa17.71■□□□□ 0.42
CACNA1E-208ENST00000533229 DEXIO95424 95 aa17.7■□□□□ 0.42
CACNA1E-208ENST00000533229 GRIN1Q05586 938 aa17.7■□□□□ 0.42
CACNA1E-208ENST00000533229 ZRSR1Q15695 479 aaKnown RBP17.7■□□□□ 0.42
CACNA1E-208ENST00000533229 FAM182BQ5T319 152 aa17.7■□□□□ 0.42
CACNA1E-208ENST00000533229 FILIP1Q7Z7B0 1213 aa17.7■□□□□ 0.42
CACNA1E-208ENST00000533229 ENAHQ8N8S7 591 aaPredicted RBP17.7■□□□□ 0.42
CACNA1E-208ENST00000533229 OXER1Q8TDS5 423 aa17.7■□□□□ 0.42
CACNA1E-208ENST00000533229 NSUN4Q96CB9 384 aaKnown RBP17.7■□□□□ 0.42
CACNA1E-208ENST00000533229 TFCP2L1Q9NZI6 479 aa17.7■□□□□ 0.42
CACNA1E-208ENST00000533229 TUBE1Q9UJT0 475 aa17.7■□□□□ 0.42
CACNA1E-208ENST00000533229 PNOCQ13519 176 aa17.69■□□□□ 0.42
CACNA1E-208ENST00000533229 LONRF3Q496Y0 759 aa17.69■□□□□ 0.42
CACNA1E-208ENST00000533229 GLIPR1L2Q4G1C9 344 aa17.69■□□□□ 0.42
CACNA1E-208ENST00000533229 CTR9Q6PD62 1173 aa17.69■□□□□ 0.42
CACNA1E-208ENST00000533229 CACNA1SQ13698 1873 aa17.69■□□□□ 0.42
CACNA1E-208ENST00000533229 CCDC196A0A1B0GTZ2 297 aa17.69■□□□□ 0.42
CACNA1E-208ENST00000533229 FOXP4Q8IVH2 680 aaPredicted RBP17.69■□□□□ 0.42
CACNA1E-208ENST00000533229 NGLY1Q96IV0 654 aa17.69■□□□□ 0.42
CACNA1E-208ENST00000533229 NLRP3Q96P20 1036 aa17.69■□□□□ 0.42
CACNA1E-208ENST00000533229 ZSCAN10Q96SZ4 725 aaPredicted RBP17.69■□□□□ 0.42
CACNA1E-208ENST00000533229 SETDB2Q96T68 719 aa17.69■□□□□ 0.42
CACNA1E-208ENST00000533229 BRIP1Q9BX63 1249 aa17.69■□□□□ 0.42
CACNA1E-208ENST00000533229 CUTAO60888 179 aa17.68■□□□□ 0.42
CACNA1E-208ENST00000533229 RPS6KA4O75676 772 aa17.68■□□□□ 0.42
CACNA1E-208ENST00000533229 RCAN1P53805 252 aa17.68■□□□□ 0.42
CACNA1E-208ENST00000533229 MECOMQ03112 1051 aa17.68■□□□□ 0.42
CACNA1E-208ENST00000533229 VPS72Q15906 364 aa17.68■□□□□ 0.42
CACNA1E-208ENST00000533229 SLC51AQ86UW1 340 aa17.68■□□□□ 0.42
CACNA1E-208ENST00000533229 TXNRD3Q86VQ6 643 aa17.68■□□□□ 0.42
CACNA1E-208ENST00000533229 METTL16Q86W50 562 aaKnown RBP17.68■□□□□ 0.42
CACNA1E-208ENST00000533229 NBPF5PQ86XG9 351 aaPredicted RBP17.68■□□□□ 0.42
CACNA1E-208ENST00000533229 PDCL3Q9H2J4 239 aa17.68■□□□□ 0.42
CACNA1E-208ENST00000533229 FOXP1Q9H334 677 aaPredicted RBP17.68■□□□□ 0.42
CACNA1E-208ENST00000533229 PCDHB6Q9Y5E3 794 aa17.68■□□□□ 0.42
CACNA1E-208ENST00000533229 ECM29Q5VYK3 1845 aa17.68■□□□□ 0.42
CACNA1E-208ENST00000533229 USP17L12C9JPN9 530 aa17.68■□□□□ 0.42
CACNA1E-208ENST00000533229 USP17L21D6R901 530 aa17.68■□□□□ 0.42
CACNA1E-208ENST00000533229 GNPATO15228 680 aa17.68■□□□□ 0.42
CACNA1E-208ENST00000533229 GTF2F1P35269 517 aaKnown RBP eCLIP17.68■□□□□ 0.42
CACNA1E-208ENST00000533229 SAFBQ15424 915 aaKnown RBP eCLIP17.68■□□□□ 0.42
CACNA1E-208ENST00000533229 HSD3B7Q9H2F3 369 aa17.68■□□□□ 0.42
CACNA1E-208ENST00000533229 KCNH3Q9ULD8 1083 aa17.68■□□□□ 0.42
CACNA1E-208ENST00000533229 hCG_1642624A0A1W2PR95 340 aa17.67■□□□□ 0.42
CACNA1E-208ENST00000533229 FOXN1O15353 648 aa17.67■□□□□ 0.42
CACNA1E-208ENST00000533229 FGRP09769 529 aa17.67■□□□□ 0.42
CACNA1E-208ENST00000533229 PRDX5P30044 214 aa17.67■□□□□ 0.42
CACNA1E-208ENST00000533229 TM4SF1P30408 202 aa17.67■□□□□ 0.42
CACNA1E-208ENST00000533229 FUT2Q10981 343 aa17.67■□□□□ 0.42
CACNA1E-208ENST00000533229 PKN1Q16512 942 aa17.67■□□□□ 0.42
CACNA1E-208ENST00000533229 RC3H1Q5TC82 1133 aaKnown RBP17.67■□□□□ 0.42
CACNA1E-208ENST00000533229 KRI1Q8N9T8 703 aaKnown RBP17.67■□□□□ 0.42
CACNA1E-208ENST00000533229 AATFQ9NY61 560 aaKnown RBP eCLIP17.67■□□□□ 0.42
CACNA1E-208ENST00000533229 JAG2Q9Y219 1238 aa17.67■□□□□ 0.42
CACNA1E-208ENST00000533229 C16orf45Q96MC5 204 aaPredicted RBP17.66■□□□□ 0.42
CACNA1E-208ENST00000533229 XPO4Q9C0E2 1151 aaKnown RBP17.66■□□□□ 0.42
CACNA1E-208ENST00000533229 NYXQ9GZU5 481 aa17.66■□□□□ 0.42
CACNA1E-208ENST00000533229 FBXO2Q9UK22 296 aaPredicted RBP17.66■□□□□ 0.42
CACNA1E-208ENST00000533229 RGL2O15211 777 aa17.66■□□□□ 0.42
CACNA1E-208ENST00000533229 PLEKHA8P1O95397 391 aa17.66■□□□□ 0.42
CACNA1E-208ENST00000533229 HIBADHP31937 336 aaKnown RBP17.66■□□□□ 0.42
CACNA1E-208ENST00000533229 RILPL1Q5EBL4 403 aa17.66■□□□□ 0.42
CACNA1E-208ENST00000533229 KRBA2Q6ZNG9 492 aa17.66■□□□□ 0.42
CACNA1E-208ENST00000533229 IFNKQ9P0W0 207 aa17.66■□□□□ 0.42
CACNA1E-208ENST00000533229 CHD4Q14839 1912 aa17.66■□□□□ 0.42
CACNA1E-208ENST00000533229 FAM205CA6NFA0 338 aa17.65■□□□□ 0.42
CACNA1E-208ENST00000533229 ZPR1O75312 459 aa17.65■□□□□ 0.42
CACNA1E-208ENST00000533229 PTPREP23469 700 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms