RNA–Protein interactions for RNA: ENST00000532656.6

CTSB-226, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-226ENST00000532656 PNMA6EA0A0J9YXQ4 647 aa21.14■□□□□ 0.97
CTSB-226ENST00000532656 NPM3O75607 178 aaKnown RBP21.14■□□□□ 0.97
CTSB-226ENST00000532656 GNAI2P04899 355 aa21.14■□□□□ 0.97
CTSB-226ENST00000532656 TRIM27P14373 513 aa21.14■□□□□ 0.97
CTSB-226ENST00000532656 MCAMP43121 646 aa21.14■□□□□ 0.97
CTSB-226ENST00000532656 SPP2Q13103 211 aa21.14■□□□□ 0.97
CTSB-226ENST00000532656 FRAT1Q92837 279 aaPredicted RBP21.14■□□□□ 0.97
CTSB-226ENST00000532656 PNMA3Q9UL41 463 aa21.14■□□□□ 0.97
CTSB-226ENST00000532656 SZT2Q5T011 3432 aa21.14■□□□□ 0.97
CTSB-226ENST00000532656 COL2A1P02458 1487 aaPredicted RBP21.13■□□□□ 0.97
CTSB-226ENST00000532656 LOC285556D6RIA3 1793 aa21.13■□□□□ 0.97
CTSB-226ENST00000532656 SGPL1O95470 568 aa21.13■□□□□ 0.97
CTSB-226ENST00000532656 G3BP1Q13283 466 aaKnown RBP eCLIP21.13■□□□□ 0.97
CTSB-226ENST00000532656 IRF5Q13568 498 aa21.13■□□□□ 0.97
CTSB-226ENST00000532656 TEX11Q8IYF3 940 aa21.13■□□□□ 0.97
CTSB-226ENST00000532656 PROCA1Q8NCQ7 364 aaPredicted RBP21.13■□□□□ 0.97
CTSB-226ENST00000532656 PXYLP1Q8TE99 480 aa21.13■□□□□ 0.97
CTSB-226ENST00000532656 CLUAP1Q96AJ1 413 aa21.13■□□□□ 0.97
CTSB-226ENST00000532656 LRP2BPQ9P2M1 347 aa21.13■□□□□ 0.97
CTSB-226ENST00000532656 RBM27Q9P2N5 1060 aaKnown RBP21.13■□□□□ 0.97
CTSB-226ENST00000532656 DOCK3Q8IZD9 2030 aa21.12■□□□□ 0.97
CTSB-226ENST00000532656 BCAR3O75815 825 aa21.12■□□□□ 0.97
CTSB-226ENST00000532656 MAP4K4O95819 1239 aaPredicted RBP21.12■□□□□ 0.97
CTSB-226ENST00000532656 HMGCS2P54868 508 aa21.12■□□□□ 0.97
CTSB-226ENST00000532656 RRP1BQ14684 758 aaKnown RBP21.12■□□□□ 0.97
CTSB-226ENST00000532656 FAM110CQ1W6H9 321 aa21.12■□□□□ 0.97
CTSB-226ENST00000532656 ATF7IPQ6VMQ6 1270 aa21.12■□□□□ 0.97
CTSB-226ENST00000532656 ZNF280CQ8ND82 737 aa21.12■□□□□ 0.97
CTSB-226ENST00000532656 SH3RF3Q8TEJ3 882 aaPredicted RBP21.12■□□□□ 0.97
CTSB-226ENST00000532656 COA7Q96BR5 231 aa21.12■□□□□ 0.97
CTSB-226ENST00000532656 IPO8O15397 1037 aaKnown RBP21.11■□□□□ 0.97
CTSB-226ENST00000532656 CAP2P40123 477 aa21.11■□□□□ 0.97
CTSB-226ENST00000532656 DEFB118Q96PH6 123 aa21.11■□□□□ 0.97
CTSB-226ENST00000532656 SNRKQ9NRH2 765 aa21.11■□□□□ 0.97
CTSB-226ENST00000532656 TFRCP02786 760 aaKnown RBP21.1■□□□□ 0.97
CTSB-226ENST00000532656 UQCRFS1P1P0C7P4 283 aa21.1■□□□□ 0.97
CTSB-226ENST00000532656 NOL10Q9BSC4 688 aaKnown RBP21.1■□□□□ 0.97
CTSB-226ENST00000532656 SIPA1L1O43166 1804 aa21.09■□□□□ 0.97
CTSB-226ENST00000532656 USP17L5A8MUK1 530 aa21.09■□□□□ 0.97
CTSB-226ENST00000532656 AATFQ9NY61 560 aaKnown RBP eCLIP21.09■□□□□ 0.97
CTSB-226ENST00000532656 NR2E3Q9Y5X4 410 aa21.09■□□□□ 0.97
CTSB-226ENST00000532656 MAST2Q6P0Q8 1798 aa21.09■□□□□ 0.97
CTSB-226ENST00000532656 PABPC4Q13310 644 aaKnown RBP eCLIP21.08■□□□□ 0.97
CTSB-226ENST00000532656 TTC39AQ5SRH9 613 aa21.08■□□□□ 0.97
CTSB-226ENST00000532656 NAA16Q6N069 864 aaPredicted RBP21.08■□□□□ 0.97
CTSB-226ENST00000532656 TBC1D2Q9BYX2 928 aa21.08■□□□□ 0.97
CTSB-226ENST00000532656 ASCC2Q9H1I8 757 aaPredicted RBP21.08■□□□□ 0.97
CTSB-226ENST00000532656 PAK6Q9NQU5 681 aaPredicted RBP21.08■□□□□ 0.97
CTSB-226ENST00000532656 HERC5Q9UII4 1024 aaKnown RBP21.08■□□□□ 0.97
CTSB-226ENST00000532656 CCER2I3L3R5 266 aa21.07■□□□□ 0.96
CTSB-226ENST00000532656 ZBTB7BO15156 539 aaPredicted RBP21.07■□□□□ 0.96
CTSB-226ENST00000532656 GCLCP48506 637 aaPredicted RBP21.07■□□□□ 0.96
CTSB-226ENST00000532656 DBNDD2Q9BQY9 259 aa21.07■□□□□ 0.96
CTSB-226ENST00000532656 AS3MTQ9HBK9 375 aa21.07■□□□□ 0.96
CTSB-226ENST00000532656 PI4KBQ9UBF8 816 aa21.07■□□□□ 0.96
CTSB-226ENST00000532656 EVI5O60447 810 aa21.06■□□□□ 0.96
CTSB-226ENST00000532656 MTMR2Q13614 643 aa21.06■□□□□ 0.96
CTSB-226ENST00000532656 TNNI3KQ59H18 835 aa21.06■□□□□ 0.96
CTSB-226ENST00000532656 SH3D19Q5HYK7 790 aa21.06■□□□□ 0.96
CTSB-226ENST00000532656 MAPKAPK5Q8IW41 473 aa21.06■□□□□ 0.96
CTSB-226ENST00000532656 TMEM57Q8N5G2 664 aa21.06■□□□□ 0.96
CTSB-226ENST00000532656 TGFBRAP1Q8WUH2 860 aa21.06■□□□□ 0.96
CTSB-226ENST00000532656 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.06■□□□□ 0.961e-7■■■□□ 17.4
CTSB-226ENST00000532656 FPGT-TNNI3KV9GXZ4 949 aa21.06■□□□□ 0.96
CTSB-226ENST00000532656 CDK5RAP2Q96SN8 1893 aa21.05■□□□□ 0.96
CTSB-226ENST00000532656 BAG3O95817 575 aa21.05■□□□□ 0.96
CTSB-226ENST00000532656 JAG1P78504 1218 aa21.05■□□□□ 0.96
CTSB-226ENST00000532656 OS9Q13438 667 aaPredicted RBP21.05■□□□□ 0.96
CTSB-226ENST00000532656 ADGRA1Q86SQ6 560 aa21.05■□□□□ 0.96
CTSB-226ENST00000532656 DHX36Q9H2U1 1008 aaKnown RBP21.05■□□□□ 0.96
CTSB-226ENST00000532656 PRO3102Q9H379 93 aa21.05■□□□□ 0.96
CTSB-226ENST00000532656 DNAJC18Q9H819 358 aa21.05■□□□□ 0.96
CTSB-226ENST00000532656 MYO5AQ9Y4I1 1855 aaKnown RBP21.05■□□□□ 0.96
CTSB-226ENST00000532656 FLT1P17948 1338 aa21.04■□□□□ 0.96
CTSB-226ENST00000532656 HMGCRP04035 888 aa21.04■□□□□ 0.96
CTSB-226ENST00000532656 CYP2E1P05181 493 aaPredicted RBP21.04■□□□□ 0.96
CTSB-226ENST00000532656 PLCG2P16885 1265 aa21.04■□□□□ 0.96
CTSB-226ENST00000532656 IRX3P78415 501 aaPredicted RBP21.04■□□□□ 0.96
CTSB-226ENST00000532656 POLA2Q14181 598 aa21.04■□□□□ 0.96
CTSB-226ENST00000532656 SHROOM1Q2M3G4 852 aaPredicted RBP21.04■□□□□ 0.96
CTSB-226ENST00000532656 CCDC158Q5M9N0 1113 aa21.04■□□□□ 0.96
CTSB-226ENST00000532656 DIS3LQ8TF46 1054 aaKnown RBP21.04■□□□□ 0.96
CTSB-226ENST00000532656 PAWRQ96IZ0 340 aaKnown RBP21.04■□□□□ 0.96
CTSB-226ENST00000532656 CRISPLD2Q9H0B8 497 aa21.04■□□□□ 0.96
CTSB-226ENST00000532656 GPR108Q9NPR9 543 aa21.04■□□□□ 0.96
CTSB-226ENST00000532656 FOCADQ5VW36 1801 aa21.04■□□□□ 0.96
CTSB-226ENST00000532656 PEX10O60683 326 aa21.03■□□□□ 0.96
CTSB-226ENST00000532656 ASNSP08243 561 aa21.03■□□□□ 0.96
CTSB-226ENST00000532656 TRIM32Q13049 653 aa21.03■□□□□ 0.96
CTSB-226ENST00000532656 CRACR2BQ8N4Y2 399 aaPredicted RBP21.03■□□□□ 0.96
CTSB-226ENST00000532656 WDR18Q9BV38 432 aa21.03■□□□□ 0.96
CTSB-226ENST00000532656 TRIM34Q9BYJ4 488 aa21.03■□□□□ 0.96
CTSB-226ENST00000532656 C1orf115Q9H7X2 142 aa21.03■□□□□ 0.96
CTSB-226ENST00000532656 TMOD4Q9NZQ9 345 aa21.03■□□□□ 0.96
CTSB-226ENST00000532656 GJD2Q9UKL4 321 aa21.03■□□□□ 0.96
CTSB-226ENST00000532656 PALD1Q9ULE6 856 aa21.03■□□□□ 0.96
CTSB-226ENST00000532656 ALPK3Q96L96 1907 aa21.03■□□□□ 0.96
CTSB-226ENST00000532656 PLXNB2O15031 1838 aa21.02■□□□□ 0.96
CTSB-226ENST00000532656 GDF11O95390 407 aa21.02■□□□□ 0.96
CTSB-226ENST00000532656 CAPN2P17655 700 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms