RNA–Protein interactions for RNA: ENST00000532409.5

CTSB-225, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-225ENST00000532409 PTPRAP18433 802 aa18.82■□□□□ 0.6
CTSB-225ENST00000532409 EXOC6Q8TAG9 804 aa18.82■□□□□ 0.6
CTSB-225ENST00000532409 DNAJC18Q9H819 358 aa18.82■□□□□ 0.6
CTSB-225ENST00000532409 PICK1Q9NRD5 415 aa18.82■□□□□ 0.6
CTSB-225ENST00000532409 SUPT16HQ9Y5B9 1047 aaKnown RBP18.82■□□□□ 0.6
CTSB-225ENST00000532409 ZHX2Q9Y6X8 837 aa18.82■□□□□ 0.6
CTSB-225ENST00000532409 MAGEB6P1A0A0J9YX57 407 aa18.81■□□□□ 0.6
CTSB-225ENST00000532409 CETPP11597 493 aa18.81■□□□□ 0.6
CTSB-225ENST00000532409 USP5P45974 858 aa18.81■□□□□ 0.6
CTSB-225ENST00000532409 MOGSQ13724 837 aa18.81■□□□□ 0.6
CTSB-225ENST00000532409 SHROOM1Q2M3G4 852 aaPredicted RBP18.81■□□□□ 0.6
CTSB-225ENST00000532409 OTUD7BQ6GQQ9 843 aa18.81■□□□□ 0.6
CTSB-225ENST00000532409 PI4KBQ9UBF8 816 aa18.81■□□□□ 0.6
CTSB-225ENST00000532409 KCNH4Q9UQ05 1017 aa18.81■□□□□ 0.6
CTSB-225ENST00000532409 PHIPQ8WWQ0 1821 aa18.81■□□□□ 0.6
CTSB-225ENST00000532409 MYH1P12882 1939 aa18.8■□□□□ 0.6
CTSB-225ENST00000532409 CTNND1O60716 968 aaKnown RBP18.8■□□□□ 0.6
CTSB-225ENST00000532409 ADD2P35612 726 aa18.8■□□□□ 0.6
CTSB-225ENST00000532409 JAG1P78504 1218 aa18.8■□□□□ 0.6
CTSB-225ENST00000532409 EVX2Q03828 476 aa18.8■□□□□ 0.6
CTSB-225ENST00000532409 LCORLQ8N3X6 602 aa18.8■□□□□ 0.6
CTSB-225ENST00000532409 DHX36Q9H2U1 1008 aaKnown RBP18.8■□□□□ 0.6
CTSB-225ENST00000532409 ATAD5Q96QE3 1844 aa18.79■□□□□ 0.6
CTSB-225ENST00000532409 FKTNO75072 461 aa18.79■□□□□ 0.6
CTSB-225ENST00000532409 CAP1Q01518 475 aa18.79■□□□□ 0.6
CTSB-225ENST00000532409 TAF1CQ15572 869 aaPredicted RBP18.79■□□□□ 0.6
CTSB-225ENST00000532409 NOM1Q5C9Z4 860 aaKnown RBP18.79■□□□□ 0.6
CTSB-225ENST00000532409 CTU1Q7Z7A3 348 aaKnown RBP18.79■□□□□ 0.6
CTSB-225ENST00000532409 ARMT1Q9H993 441 aa18.79■□□□□ 0.6
CTSB-225ENST00000532409 MYH7P12883 1935 aa18.78■□□□□ 0.6
CTSB-225ENST00000532409 DDX60LQ5H9U9 1706 aaKnown RBP18.78■□□□□ 0.6
CTSB-225ENST00000532409 TRIM75PA6NK02 468 aa18.78■□□□□ 0.6
CTSB-225ENST00000532409 SDR42E1Q8WUS8 393 aa18.78■□□□□ 0.6
CTSB-225ENST00000532409 HERC5Q9UII4 1024 aaKnown RBP18.78■□□□□ 0.6
CTSB-225ENST00000532409 AFG3L2Q9Y4W6 797 aa18.78■□□□□ 0.6
CTSB-225ENST00000532409 NAV1Q8NEY1 1877 aa18.77■□□□□ 0.6
CTSB-225ENST00000532409 PTPRFP10586 1907 aa18.77■□□□□ 0.6
CTSB-225ENST00000532409 PRKAB2O43741 272 aa18.77■□□□□ 0.6
CTSB-225ENST00000532409 MBD4O95243 580 aa18.77■□□□□ 0.6
CTSB-225ENST00000532409 CAP2P40123 477 aa18.77■□□□□ 0.6
CTSB-225ENST00000532409 IRX6P78412 446 aaPredicted RBP18.77■□□□□ 0.6
CTSB-225ENST00000532409 HDAC1Q13547 482 aaPredicted RBP18.77■□□□□ 0.6
CTSB-225ENST00000532409 TMED8Q6PL24 325 aaPredicted RBP18.77■□□□□ 0.6
CTSB-225ENST00000532409 METTL16Q86W50 562 aaKnown RBP18.77■□□□□ 0.6
CTSB-225ENST00000532409 CRACR2BQ8N4Y2 399 aaPredicted RBP18.77■□□□□ 0.6
CTSB-225ENST00000532409 PDHXO00330 501 aa18.76■□□□□ 0.59
CTSB-225ENST00000532409 CXCL11O14625 94 aa18.76■□□□□ 0.59
CTSB-225ENST00000532409 GDF11O95390 407 aa18.76■□□□□ 0.59
CTSB-225ENST00000532409 ANKRD45Q5TZF3 282 aa18.76■□□□□ 0.59
CTSB-225ENST00000532409 GPAT2Q6NUI2 795 aa18.76■□□□□ 0.59
CTSB-225ENST00000532409 CERS3Q8IU89 383 aa18.76■□□□□ 0.59
CTSB-225ENST00000532409 PI4K2BQ8TCG2 481 aa18.76■□□□□ 0.59
CTSB-225ENST00000532409 CD99L2Q8TCZ2 262 aa18.76■□□□□ 0.59
CTSB-225ENST00000532409 GPATCH3Q96I76 525 aa18.76■□□□□ 0.59
CTSB-225ENST00000532409 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.76■□□□□ 0.591e-6■■■□□ 15.4
CTSB-225ENST00000532409 A0A0G2JLL6 359 aaPredicted RBP18.75■□□□□ 0.59
CTSB-225ENST00000532409 CCDC85CA6NKD9 419 aa18.75■□□□□ 0.59
CTSB-225ENST00000532409 HLA-DOAP06340 250 aa18.75■□□□□ 0.59
CTSB-225ENST00000532409 CYP2D6P10635 497 aa18.75■□□□□ 0.59
CTSB-225ENST00000532409 PLCD1P51178 756 aa18.75■□□□□ 0.59
CTSB-225ENST00000532409 PRRT2Q7Z6L0 340 aaPredicted RBP18.75■□□□□ 0.59
CTSB-225ENST00000532409 FOXP4Q8IVH2 680 aaPredicted RBP18.75■□□□□ 0.59
CTSB-225ENST00000532409 TRIM34Q9BYJ4 488 aa18.75■□□□□ 0.59
CTSB-225ENST00000532409 CRNKL1Q9BZJ0 848 aaKnown RBP18.75■□□□□ 0.59
CTSB-225ENST00000532409 ZFYVE28Q9HCC9 887 aa18.75■□□□□ 0.59
CTSB-225ENST00000532409 ZSWIM8A7E2V4 1837 aa18.74■□□□□ 0.59
CTSB-225ENST00000532409 HTTP42858 3142 aa18.74■□□□□ 0.59
CTSB-225ENST00000532409 SMIM22K7EJ46 135 aa18.74■□□□□ 0.59
CTSB-225ENST00000532409 ECM2O94769 699 aaPredicted RBP18.74■□□□□ 0.59
CTSB-225ENST00000532409 IGHDP01880 384 aa18.74■□□□□ 0.59
CTSB-225ENST00000532409 SPP2Q13103 211 aa18.74■□□□□ 0.59
CTSB-225ENST00000532409 UBE3CQ15386 1083 aa18.74■□□□□ 0.59
CTSB-225ENST00000532409 GADL1Q6ZQY3 521 aa18.74■□□□□ 0.59
CTSB-225ENST00000532409 ANKRD23Q86SG2 305 aa18.74■□□□□ 0.59
CTSB-225ENST00000532409 PUS7LQ9H0K6 701 aaKnown RBP18.74■□□□□ 0.59
CTSB-225ENST00000532409 DCP1AQ9NPI6 582 aaPredicted RBP18.74■□□□□ 0.59
CTSB-225ENST00000532409 SALL3Q9BXA9 1300 aa18.74■□□□□ 0.59
CTSB-225ENST00000532409 CYP2C8P10632 490 aa18.73■□□□□ 0.59
CTSB-225ENST00000532409 MX1P20591 662 aa18.73■□□□□ 0.59
CTSB-225ENST00000532409 SP3Q02447 781 aa18.73■□□□□ 0.59
CTSB-225ENST00000532409 KBTBD3Q8NAB2 608 aa18.73■□□□□ 0.59
CTSB-225ENST00000532409 ZCCHC17Q9NP64 241 aaKnown RBP18.73■□□□□ 0.59
CTSB-225ENST00000532409 MCM9Q9NXL9 1143 aa18.73■□□□□ 0.59
CTSB-225ENST00000532409 CPA4Q9UI42 421 aa18.73■□□□□ 0.59
CTSB-225ENST00000532409 SERPINB13Q9UIV8 391 aa18.73■□□□□ 0.59
CTSB-225ENST00000532409 TRIM17Q9Y577 477 aa18.73■□□□□ 0.59
CTSB-225ENST00000532409 TTC41PQ6P2S7 1318 aa18.73■□□□□ 0.59
CTSB-225ENST00000532409 BAZ2AQ9UIF9 1905 aaKnown RBP18.72■□□□□ 0.59
CTSB-225ENST00000532409 TLR2O60603 784 aa18.72■□□□□ 0.59
CTSB-225ENST00000532409 POLR3DP05423 398 aaPredicted RBP18.72■□□□□ 0.59
CTSB-225ENST00000532409 TREML2Q5T2D2 321 aa18.72■□□□□ 0.59
CTSB-225ENST00000532409 B4GALNT3Q6L9W6 998 aa18.72■□□□□ 0.59
CTSB-225ENST00000532409 OTOP1Q7RTM1 612 aa18.72■□□□□ 0.59
CTSB-225ENST00000532409 ZNF280CQ8ND82 737 aa18.72■□□□□ 0.59
CTSB-225ENST00000532409 GCC1Q96CN9 775 aa18.72■□□□□ 0.59
CTSB-225ENST00000532409 ARHGAP39Q9C0H5 1083 aa18.72■□□□□ 0.59
CTSB-225ENST00000532409 ZBTB21Q9ULJ3 1066 aa18.72■□□□□ 0.59
CTSB-225ENST00000532409 ADGRA2Q96PE1 1338 aa18.72■□□□□ 0.59
CTSB-225ENST00000532409 CYP2D7A0A087X1C5 515 aa18.71■□□□□ 0.59
CTSB-225ENST00000532409 USP17L5A8MUK1 530 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms