RNA–Protein interactions for RNA: ENST00000532347.1

KNL1-209, Transcript of kinetochore scaffold 1, humanhuman

TSL 4

Gene KNL1, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-209ENST00000532347 CCSER2Q9H7U1 834 aa11.5□□□□□ -0.57
KNL1-209ENST00000532347 ADAMTS1Q9UHI8 967 aa11.5□□□□□ -0.57
KNL1-209ENST00000532347 ARHGAP35Q9NRY4 1499 aa11.5□□□□□ -0.57
KNL1-209ENST00000532347 FAM135AQ9P2D6 1515 aa11.5□□□□□ -0.57
KNL1-209ENST00000532347 ITSN2Q9NZM3 1697 aa11.49□□□□□ -0.57
KNL1-209ENST00000532347 CDC42BPBQ9Y5S2 1711 aa11.49□□□□□ -0.57
KNL1-209ENST00000532347 WISP1O95388 367 aa11.49□□□□□ -0.57
KNL1-209ENST00000532347 DLGAP3O95886 979 aa11.49□□□□□ -0.57
KNL1-209ENST00000532347 LMNB1P20700 586 aa11.49□□□□□ -0.57
KNL1-209ENST00000532347 EIF4A3P38919 411 aaKnown RBP11.49□□□□□ -0.57
KNL1-209ENST00000532347 LMNB2Q03252 620 aa11.49□□□□□ -0.57
KNL1-209ENST00000532347 FAM160A1Q05DH4 1040 aa11.49□□□□□ -0.57
KNL1-209ENST00000532347 CAMK2GQ13555 558 aaPredicted RBP11.49□□□□□ -0.57
KNL1-209ENST00000532347 GRIK4Q16099 956 aa11.49□□□□□ -0.57
KNL1-209ENST00000532347 DUOXA2Q1HG44 320 aa11.49□□□□□ -0.57
KNL1-209ENST00000532347 IGF2-ASQ6U949 168 aa11.49□□□□□ -0.57
KNL1-209ENST00000532347 ACBD3Q9H3P7 528 aa11.49□□□□□ -0.57
KNL1-209ENST00000532347 CCDC86Q9H6F5 360 aaKnown RBP11.49□□□□□ -0.57
KNL1-209ENST00000532347 PLEKHH2Q8IVE3 1493 aa11.49□□□□□ -0.57
KNL1-209ENST00000532347 FAM181BA6NEQ2 426 aa11.48□□□□□ -0.57
KNL1-209ENST00000532347 SPATA31C1P0DKV0 1188 aa11.48□□□□□ -0.57
KNL1-209ENST00000532347 SHISA2Q6UWI4 295 aa11.48□□□□□ -0.57
KNL1-209ENST00000532347 TRIM42Q8IWZ5 723 aa11.48□□□□□ -0.57
KNL1-209ENST00000532347 KIAA1107Q9UPP5 1409 aa11.48□□□□□ -0.57
KNL1-209ENST00000532347 KIDINS220Q9ULH0 1771 aa11.48□□□□□ -0.57
KNL1-209ENST00000532347 SEPT6Q14141 434 aa11.47□□□□□ -0.57
KNL1-209ENST00000532347 PDE3AQ14432 1141 aa11.47□□□□□ -0.57
KNL1-209ENST00000532347 FBXL19Q6PCT2 694 aa11.47□□□□□ -0.57
KNL1-209ENST00000532347 AFAP1Q8N556 730 aa11.47□□□□□ -0.57
KNL1-209ENST00000532347 MIR1-1HGQ9H1L0 117 aa11.47□□□□□ -0.57
KNL1-209ENST00000532347 KCNQ5Q9NR82 932 aa11.47□□□□□ -0.57
KNL1-209ENST00000532347 CACNA2D2Q9NY47 1150 aa11.47□□□□□ -0.57
KNL1-209ENST00000532347 TCOF1Q13428 1488 aaKnown RBP11.46□□□□□ -0.57
KNL1-209ENST00000532347 CASKIN1Q8WXD9 1431 aa11.46□□□□□ -0.57
KNL1-209ENST00000532347 TRIM37O94972 964 aa11.46□□□□□ -0.57
KNL1-209ENST00000532347 GARTP22102 1010 aa11.46□□□□□ -0.57
KNL1-209ENST00000532347 CEBPAP49715 358 aaPredicted RBP11.46□□□□□ -0.57
KNL1-209ENST00000532347 PTPN11Q06124 597 aaPredicted RBP11.46□□□□□ -0.57
KNL1-209ENST00000532347 SCARA3Q6AZY7 606 aa11.46□□□□□ -0.57
KNL1-209ENST00000532347 ZNF296Q8WUU4 475 aaPredicted RBP11.46□□□□□ -0.57
KNL1-209ENST00000532347 GAL3ST3Q96A11 431 aa11.46□□□□□ -0.57
KNL1-209ENST00000532347 SPON2Q9BUD6 331 aa11.46□□□□□ -0.57
KNL1-209ENST00000532347 MRPL18Q9H0U6 180 aaKnown RBP11.46□□□□□ -0.57
KNL1-209ENST00000532347 KRT82Q9NSB4 513 aa11.46□□□□□ -0.57
KNL1-209ENST00000532347 PLXNC1O60486 1568 aa11.45□□□□□ -0.58
KNL1-209ENST00000532347 SELPP16109 830 aa11.45□□□□□ -0.58
KNL1-209ENST00000532347 ZC3H6P61129 1189 aaKnown RBP11.45□□□□□ -0.58
KNL1-209ENST00000532347 SNAP47Q5SQN1 464 aa11.45□□□□□ -0.58
KNL1-209ENST00000532347 KIAA1211Q6ZU35 1233 aa11.45□□□□□ -0.58
KNL1-209ENST00000532347 ACAD11Q709F0 780 aa11.45□□□□□ -0.58
KNL1-209ENST00000532347 KIAA0825Q8IV33 1275 aa11.45□□□□□ -0.58
KNL1-209ENST00000532347 GOLM1Q8NBJ4 401 aa11.45□□□□□ -0.58
KNL1-209ENST00000532347 GPBAR1Q8TDU6 330 aa11.45□□□□□ -0.58
KNL1-209ENST00000532347 WDR89Q96FK6 387 aaPredicted RBP11.45□□□□□ -0.58
KNL1-209ENST00000532347 CAMSAP1Q5T5Y3 1602 aa11.45□□□□□ -0.58
KNL1-209ENST00000532347 ZNF862O60290 1169 aa11.44□□□□□ -0.58
KNL1-209ENST00000532347 TNNI2P48788 182 aa11.44□□□□□ -0.58
KNL1-209ENST00000532347 HP1BP3Q5SSJ5 553 aaPredicted RBP11.44□□□□□ -0.58
KNL1-209ENST00000532347 BNC2Q6ZN30 1099 aaPredicted RBP11.44□□□□□ -0.58
KNL1-209ENST00000532347 JARID2Q92833 1246 aaPredicted RBP11.44□□□□□ -0.58
KNL1-209ENST00000532347 SUPT16HQ9Y5B9 1047 aaKnown RBP11.44□□□□□ -0.58
KNL1-209ENST00000532347 SAMD9LQ8IVG5 1584 aa11.43□□□□□ -0.58
KNL1-209ENST00000532347 LIG1P18858 919 aa11.43□□□□□ -0.58
KNL1-209ENST00000532347 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.43□□□□□ -0.58
KNL1-209ENST00000532347 CCDC84Q86UT8 332 aaPredicted RBP11.43□□□□□ -0.58
KNL1-209ENST00000532347 ACSBG1Q96GR2 724 aa11.43□□□□□ -0.58
KNL1-209ENST00000532347 RUSC1Q9BVN2 902 aa11.43□□□□□ -0.58
KNL1-209ENST00000532347 FYCO1Q9BQS8 1478 aa11.43□□□□□ -0.58
KNL1-209ENST00000532347 ZMYM3Q14202 1370 aa11.42□□□□□ -0.58
KNL1-209ENST00000532347 GREM1O60565 184 aa11.42□□□□□ -0.58
KNL1-209ENST00000532347 F13A1P00488 732 aa11.42□□□□□ -0.58
KNL1-209ENST00000532347 PAK2Q13177 524 aa11.42□□□□□ -0.58
KNL1-209ENST00000532347 EXOSC6Q5RKV6 272 aaKnown RBP11.42□□□□□ -0.58
KNL1-209ENST00000532347 LENG1Q96BZ8 264 aaPredicted RBP11.42□□□□□ -0.58
KNL1-209ENST00000532347 TMPRSS13Q9BYE2 586 aa11.42□□□□□ -0.58
KNL1-209ENST00000532347 CAPN10Q9HC96 672 aa11.42□□□□□ -0.58
KNL1-209ENST00000532347 CDC42BPAQ5VT25 1732 aa11.42□□□□□ -0.58
KNL1-209ENST00000532347 MYO3AQ8NEV4 1616 aa11.42□□□□□ -0.58
KNL1-209ENST00000532347 CEP170BQ9Y4F5 1589 aaPredicted RBP11.41□□□□□ -0.58
KNL1-209ENST00000532347 CPS1P31327 1500 aa11.41□□□□□ -0.58
KNL1-209ENST00000532347 FAM221AA4D161 298 aa11.41□□□□□ -0.58
KNL1-209ENST00000532347 KIF4BQ2VIQ3 1234 aa11.41□□□□□ -0.58
KNL1-209ENST00000532347 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.41□□□□□ -0.58
KNL1-209ENST00000532347 TMEM130Q8N3G9 435 aa11.41□□□□□ -0.58
KNL1-209ENST00000532347 GATAD2BQ8WXI9 593 aa11.41□□□□□ -0.58
KNL1-209ENST00000532347 EAF1Q96JC9 268 aaPredicted RBP11.41□□□□□ -0.58
KNL1-209ENST00000532347 C8orf37Q96NL8 207 aa11.41□□□□□ -0.58
KNL1-209ENST00000532347 TINF2Q9BSI4 451 aa11.41□□□□□ -0.58
KNL1-209ENST00000532347 WDR18Q9BV38 432 aa11.41□□□□□ -0.58
KNL1-209ENST00000532347 USP21Q9UK80 565 aa11.41□□□□□ -0.58
KNL1-209ENST00000532347 INPP5FQ9Y2H2 1132 aa11.41□□□□□ -0.58
KNL1-209ENST00000532347 INO80Q9ULG1 1556 aaPredicted RBP11.41□□□□□ -0.58
KNL1-209ENST00000532347 ATP7AQ04656 1500 aa11.4□□□□□ -0.58
KNL1-209ENST00000532347 MEGF11A6BM72 1044 aa11.4□□□□□ -0.58
KNL1-209ENST00000532347 F8W735 103 aaPredicted RBP11.4□□□□□ -0.58
KNL1-209ENST00000532347 AOC2O75106 756 aa11.4□□□□□ -0.58
KNL1-209ENST00000532347 NAALADL2Q58DX5 795 aa11.4□□□□□ -0.58
KNL1-209ENST00000532347 FAM196AQ6ZSG2 479 aa11.4□□□□□ -0.58
KNL1-209ENST00000532347 AGGF1Q8N302 714 aaeCLIP11.4□□□□□ -0.58
KNL1-209ENST00000532347 RNF208Q9H0X6 261 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms