RNA–Protein interactions for RNA: ENST00000531546.1

CASP4-210, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 921 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-210ENST00000531546 ERVK-24P63145 666 aa8.85□□□□□ -0.99
CASP4-210ENST00000531546 PDZD3Q86UT5 571 aa8.85□□□□□ -0.99
CASP4-210ENST00000531546 KRTAP4-2Q9BYR5 136 aa8.85□□□□□ -0.99
CASP4-210ENST00000531546 KDM6BO15054 1643 aa8.84□□□□□ -0.99
CASP4-210ENST00000531546 IGF2BP3O00425 579 aaKnown RBP eCLIP8.84□□□□□ -0.99
CASP4-210ENST00000531546 XRCC5P13010 732 aaKnown RBP8.84□□□□□ -0.99
CASP4-210ENST00000531546 ARHGAP4P98171 946 aa8.84□□□□□ -0.99
CASP4-210ENST00000531546 ZP2Q05996 745 aa8.84□□□□□ -0.99
CASP4-210ENST00000531546 MLANAQ16655 118 aa8.84□□□□□ -0.99
CASP4-210ENST00000531546 SULF2Q8IWU5 870 aa8.84□□□□□ -0.99
CASP4-210ENST00000531546 PPP4R2Q9NY27 417 aa8.84□□□□□ -0.99
CASP4-210ENST00000531546 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.84□□□□□ -0.99
CASP4-210ENST00000531546 RAP1GAPP47736 663 aa8.83□□□□□ -1
CASP4-210ENST00000531546 ECM1Q16610 540 aa8.83□□□□□ -1
CASP4-210ENST00000531546 ZC3H12AQ5D1E8 599 aaKnown RBP8.83□□□□□ -1
CASP4-210ENST00000531546 TMC1Q8TDI8 760 aa8.83□□□□□ -1
CASP4-210ENST00000531546 PRDM7Q9NQW5 492 aa8.83□□□□□ -1
CASP4-210ENST00000531546 CARNS1A5YM72 827 aa8.82□□□□□ -1
CASP4-210ENST00000531546 ZNF503-AS2A6NEH8 195 aa8.82□□□□□ -1
CASP4-210ENST00000531546 GPR182O15218 404 aa8.82□□□□□ -1
CASP4-210ENST00000531546 TSPAN15O95858 294 aa8.82□□□□□ -1
CASP4-210ENST00000531546 SERPINB4P48594 390 aa8.82□□□□□ -1
CASP4-210ENST00000531546 FCGRTP55899 365 aa8.82□□□□□ -1
CASP4-210ENST00000531546 ZSCAN18Q8TBC5 510 aaPredicted RBP8.82□□□□□ -1
CASP4-210ENST00000531546 EMILIN2Q9BXX0 1053 aa8.82□□□□□ -1
CASP4-210ENST00000531546 USTQ9Y2C2 406 aa8.82□□□□□ -1
CASP4-210ENST00000531546 AFMP43652 599 aa8.81□□□□□ -1
CASP4-210ENST00000531546 CLCN7P51798 805 aa8.81□□□□□ -1
CASP4-210ENST00000531546 SPACA3Q8IXA5 215 aa8.81□□□□□ -1
CASP4-210ENST00000531546 DMRTB1Q96MA1 342 aa8.81□□□□□ -1
CASP4-210ENST00000531546 HEXIM2Q96MH2 286 aaKnown RBP8.81□□□□□ -1
CASP4-210ENST00000531546 CSRNP1Q96S65 589 aa8.81□□□□□ -1
CASP4-210ENST00000531546 NIF3L1Q9GZT8 377 aa8.81□□□□□ -1
CASP4-210ENST00000531546 CTNND2Q9UQB3 1225 aa8.81□□□□□ -1
CASP4-210ENST00000531546 TARBP1Q13395 1621 aaKnown RBP8.8□□□□□ -1
CASP4-210ENST00000531546 GNAT3A8MTJ3 354 aa8.8□□□□□ -1
CASP4-210ENST00000531546 MAP1SQ66K74 1059 aaPredicted RBP8.8□□□□□ -1
CASP4-210ENST00000531546 ALKBH8Q96BT7 664 aaKnown RBP8.8□□□□□ -1
CASP4-210ENST00000531546 ACSBG1Q96GR2 724 aa8.8□□□□□ -1
CASP4-210ENST00000531546 PRDM10Q9NQV6 1147 aa8.8□□□□□ -1
CASP4-210ENST00000531546 NLRP2Q9NX02 1062 aa8.8□□□□□ -1
CASP4-210ENST00000531546 ADGRL1O94910 1474 aa8.8□□□□□ -1
CASP4-210ENST00000531546 TSPOAP1O95153 1857 aa8.8□□□□□ -1
CASP4-210ENST00000531546 TDRD9Q8NDG6 1382 aaKnown RBP8.79□□□□□ -1
CASP4-210ENST00000531546 DISP3Q9P2K9 1392 aa8.79□□□□□ -1
CASP4-210ENST00000531546 NME2P22392 152 aa8.79□□□□□ -1
CASP4-210ENST00000531546 ARNTP27540 789 aa8.79□□□□□ -1
CASP4-210ENST00000531546 DNMBPQ6XZF7 1577 aa8.78□□□□□ -1
CASP4-210ENST00000531546 SYNJ2O15056 1496 aa8.78□□□□□ -1
CASP4-210ENST00000531546 IGHA2P01877 340 aa8.78□□□□□ -1
CASP4-210ENST00000531546 FAM214BQ7L5A3 538 aa8.78□□□□□ -1
CASP4-210ENST00000531546 GPBAR1Q8TDU6 330 aa8.78□□□□□ -1
CASP4-210ENST00000531546 EPS8L3Q8TE67 593 aaKnown RBP8.78□□□□□ -1
CASP4-210ENST00000531546 PITPNM2Q9BZ72 1349 aa8.78□□□□□ -1
CASP4-210ENST00000531546 GLI1P08151 1106 aa8.77□□□□□ -1.01
CASP4-210ENST00000531546 MPZL3Q6UWV2 235 aa8.77□□□□□ -1.01
CASP4-210ENST00000531546 CILP2Q8IUL8 1156 aa8.77□□□□□ -1.01
CASP4-210ENST00000531546 PICK1Q9NRD5 415 aa8.77□□□□□ -1.01
CASP4-210ENST00000531546 LMCD1Q9NZU5 365 aa8.77□□□□□ -1.01
CASP4-210ENST00000531546 ABCC8Q09428 1581 aa8.77□□□□□ -1.01
CASP4-210ENST00000531546 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.76□□□□□ -1.01
CASP4-210ENST00000531546 CFPP27918 469 aa8.76□□□□□ -1.01
CASP4-210ENST00000531546 NKPD1Q17RQ9 610 aa8.76□□□□□ -1.01
CASP4-210ENST00000531546 ANKLE2Q86XL3 938 aa8.76□□□□□ -1.01
CASP4-210ENST00000531546 STK35Q8TDR2 534 aa8.76□□□□□ -1.01
CASP4-210ENST00000531546 LIN37Q96GY3 246 aaPredicted RBP8.76□□□□□ -1.01
CASP4-210ENST00000531546 FOXQ1Q9C009 403 aa8.76□□□□□ -1.01
CASP4-210ENST00000531546 PRDM5Q9NQX1 630 aaPredicted RBP8.76□□□□□ -1.01
CASP4-210ENST00000531546 MAPK8IP1Q9UQF2 711 aa8.76□□□□□ -1.01
CASP4-210ENST00000531546 RAD54L2Q9Y4B4 1467 aa8.76□□□□□ -1.01
CASP4-210ENST00000531546 ZNF252P-AS1Q0IIN9 211 aa8.75□□□□□ -1.01
CASP4-210ENST00000531546 LRRC56Q8IYG6 542 aaPredicted RBP8.75□□□□□ -1.01
CASP4-210ENST00000531546 KCT2Q8NC54 265 aa8.75□□□□□ -1.01
CASP4-210ENST00000531546 KIRREL1Q96J84 757 aa8.75□□□□□ -1.01
CASP4-210ENST00000531546 CBX8Q9HC52 389 aa8.75□□□□□ -1.01
CASP4-210ENST00000531546 AKAP2Q9Y2D5 859 aa8.75□□□□□ -1.01
CASP4-210ENST00000531546 PPM1JQ5JR12 505 aa8.74□□□□□ -1.01
CASP4-210ENST00000531546 SYDE1Q6ZW31 735 aaPredicted RBP8.74□□□□□ -1.01
CASP4-210ENST00000531546 CYFIP1Q7L576 1253 aa8.74□□□□□ -1.01
CASP4-210ENST00000531546 SIAH1Q8IUQ4 282 aa8.74□□□□□ -1.01
CASP4-210ENST00000531546 RBCK1Q9BYM8 510 aa8.74□□□□□ -1.01
CASP4-210ENST00000531546 BCO2Q9BYV7 579 aa8.74□□□□□ -1.01
CASP4-210ENST00000531546 CACNA2D2Q9NY47 1150 aa8.74□□□□□ -1.01
CASP4-210ENST00000531546 SAMM50Q9Y512 469 aa8.74□□□□□ -1.01
CASP4-210ENST00000531546 POLA1P09884 1462 aaPredicted RBP8.74□□□□□ -1.01
CASP4-210ENST00000531546 MAGI1Q96QZ7 1491 aaPredicted RBP8.74□□□□□ -1.01
CASP4-210ENST00000531546 FANCGO15287 622 aa8.73□□□□□ -1.01
CASP4-210ENST00000531546 TMEM67Q5HYA8 995 aa8.73□□□□□ -1.01
CASP4-210ENST00000531546 CDC37L1Q7L3B6 337 aa8.73□□□□□ -1.01
CASP4-210ENST00000531546 C1QL4Q86Z23 238 aa8.73□□□□□ -1.01
CASP4-210ENST00000531546 NTF4P34130 210 aa8.72□□□□□ -1.01
CASP4-210ENST00000531546 FYB2Q5VWT5 728 aa8.72□□□□□ -1.01
CASP4-210ENST00000531546 CCDC120Q96HB5 630 aa8.72□□□□□ -1.01
CASP4-210ENST00000531546 KRTAP4-11Q9BYQ6 195 aa8.72□□□□□ -1.01
CASP4-210ENST00000531546 KRTAP9-7A8MTY7 169 aa8.71□□□□□ -1.02
CASP4-210ENST00000531546 NFIBO00712 420 aa8.71□□□□□ -1.02
CASP4-210ENST00000531546 TRIM37O94972 964 aa8.71□□□□□ -1.02
CASP4-210ENST00000531546 EOMESO95936 686 aa8.71□□□□□ -1.02
CASP4-210ENST00000531546 PRR23BQ6ZRT6 265 aa8.71□□□□□ -1.02
CASP4-210ENST00000531546 CARS2Q9HA77 564 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms