RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 A0A1B0GVL5 298 aa13.34□□□□□ -0.27
USP35-207ENST00000530546 KINO60870 393 aaKnown RBP13.34□□□□□ -0.27
USP35-207ENST00000530546 SART3Q15020 963 aaKnown RBP13.34□□□□□ -0.27
USP35-207ENST00000530546 FAM200AQ8TCP9 573 aa13.34□□□□□ -0.27
USP35-207ENST00000530546 ZNF384Q8TF68 577 aa13.34□□□□□ -0.27
USP35-207ENST00000530546 AFF2P51816 1311 aa13.34□□□□□ -0.27
USP35-207ENST00000530546 TNNT1P13805 278 aa13.33□□□□□ -0.28
USP35-207ENST00000530546 SLC4A8Q2Y0W8 1093 aa13.33□□□□□ -0.28
USP35-207ENST00000530546 ATL3Q6DD88 541 aa13.33□□□□□ -0.28
USP35-207ENST00000530546 FBXO33Q7Z6M2 555 aa13.33□□□□□ -0.28
USP35-207ENST00000530546 SGMS1Q86VZ5 419 aa13.33□□□□□ -0.28
USP35-207ENST00000530546 SEPT12Q8IYM1 358 aa13.33□□□□□ -0.28
USP35-207ENST00000530546 LINC00301Q8NCQ3 95 aa13.33□□□□□ -0.28
USP35-207ENST00000530546 RIOK1Q9BRS2 568 aaKnown RBP13.33□□□□□ -0.28
USP35-207ENST00000530546 UBAC1Q9BSL1 405 aa13.33□□□□□ -0.28
USP35-207ENST00000530546 CBX8Q9HC52 389 aa13.33□□□□□ -0.28
USP35-207ENST00000530546 RTEL1Q9NZ71 1219 aa13.33□□□□□ -0.28
USP35-207ENST00000530546 SPATA31A6Q5VVP1 1343 aa13.33□□□□□ -0.28
USP35-207ENST00000530546 LIFRP42702 1097 aa13.33□□□□□ -0.28
USP35-207ENST00000530546 SPC24Q8NBT2 197 aa13.33□□□□□ -0.28
USP35-207ENST00000530546 AATFQ9NY61 560 aaKnown RBP eCLIP13.33□□□□□ -0.28
USP35-207ENST00000530546 ANKIB1Q9P2G1 1089 aa13.33□□□□□ -0.28
USP35-207ENST00000530546 MARCKSP29966 332 aaPredicted RBP13.32□□□□□ -0.28
USP35-207ENST00000530546 PRDX5P30044 214 aa13.32□□□□□ -0.28
USP35-207ENST00000530546 EVX2Q03828 476 aa13.32□□□□□ -0.28
USP35-207ENST00000530546 SSRP1Q08945 709 aaKnown RBP13.32□□□□□ -0.28
USP35-207ENST00000530546 TRIM29Q14134 588 aa13.32□□□□□ -0.28
USP35-207ENST00000530546 NFIXQ14938 502 aa13.32□□□□□ -0.28
USP35-207ENST00000530546 NTRK3Q16288 839 aa13.32□□□□□ -0.28
USP35-207ENST00000530546 GPR101Q96P66 508 aaPredicted RBP13.32□□□□□ -0.28
USP35-207ENST00000530546 RNF41Q9H4P4 317 aaPredicted RBP13.32□□□□□ -0.28
USP35-207ENST00000530546 CICQ96RK0 1608 aaPredicted RBP13.32□□□□□ -0.28
USP35-207ENST00000530546 BTAF1O14981 1849 aa13.32□□□□□ -0.28
USP35-207ENST00000530546 LAMB2P55268 1798 aa13.32□□□□□ -0.28
USP35-207ENST00000530546 SPTLC2O15270 562 aa13.32□□□□□ -0.28
USP35-207ENST00000530546 CAPN2P17655 700 aa13.32□□□□□ -0.28
USP35-207ENST00000530546 GUCY1A2P33402 732 aa13.32□□□□□ -0.28
USP35-207ENST00000530546 MECOMQ03112 1051 aa13.32□□□□□ -0.28
USP35-207ENST00000530546 RTN1Q16799 776 aa13.32□□□□□ -0.28
USP35-207ENST00000530546 BRAPQ7Z569 592 aa13.32□□□□□ -0.28
USP35-207ENST00000530546 ANKRD2Q9GZV1 360 aa13.32□□□□□ -0.28
USP35-207ENST00000530546 LRRC4BQ9NT99 713 aa13.32□□□□□ -0.28
USP35-207ENST00000530546 PTGS1P23219 599 aa13.32□□□□□ -0.28
USP35-207ENST00000530546 TM4SF1P30408 202 aa13.32□□□□□ -0.28
USP35-207ENST00000530546 FAM160A1Q05DH4 1040 aa13.32□□□□□ -0.28
USP35-207ENST00000530546 SNW1Q13573 536 aaKnown RBP13.32□□□□□ -0.28
USP35-207ENST00000530546 MRPS27Q92552 414 aaKnown RBP13.32□□□□□ -0.28
USP35-207ENST00000530546 C16orf45Q96MC5 204 aaPredicted RBP13.32□□□□□ -0.28
USP35-207ENST00000530546 HSPA1LP34931 641 aa13.31□□□□□ -0.28
USP35-207ENST00000530546 ZNF165P49910 485 aa13.31□□□□□ -0.28
USP35-207ENST00000530546 ANO1Q5XXA6 986 aa13.31□□□□□ -0.28
USP35-207ENST00000530546 RBM43Q6ZSC3 357 aaKnown RBP13.31□□□□□ -0.28
USP35-207ENST00000530546 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.31□□□□□ -0.28
USP35-207ENST00000530546 DOCK2Q92608 1830 aa13.31□□□□□ -0.28
USP35-207ENST00000530546 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.31□□□□□ -0.28
USP35-207ENST00000530546 NDUFA8P51970 172 aa13.31□□□□□ -0.28
USP35-207ENST00000530546 IRX3P78415 501 aaPredicted RBP13.31□□□□□ -0.28
USP35-207ENST00000530546 CNBD1Q8NA66 436 aa13.31□□□□□ -0.28
USP35-207ENST00000530546 ESR2Q92731 530 aa13.31□□□□□ -0.28
USP35-207ENST00000530546 NSUN4Q96CB9 384 aaKnown RBP13.31□□□□□ -0.28
USP35-207ENST00000530546 SDF4Q9BRK5 362 aa13.31□□□□□ -0.28
USP35-207ENST00000530546 KCNJ14Q9UNX9 436 aa13.31□□□□□ -0.28
USP35-207ENST00000530546 TNKSO95271 1327 aa13.3□□□□□ -0.28
USP35-207ENST00000530546 USP17L12C9JPN9 530 aa13.3□□□□□ -0.28
USP35-207ENST00000530546 USP17L21D6R901 530 aa13.3□□□□□ -0.28
USP35-207ENST00000530546 KMT5BQ4FZB7 885 aa13.3□□□□□ -0.28
USP35-207ENST00000530546 ZNF654Q8IZM8 581 aa13.3□□□□□ -0.28
USP35-207ENST00000530546 ENGASEQ8NFI3 743 aa13.3□□□□□ -0.28
USP35-207ENST00000530546 ADALQ6DHV7 355 aa13.3□□□□□ -0.28
USP35-207ENST00000530546 CERKQ8TCT0 537 aa13.3□□□□□ -0.28
USP35-207ENST00000530546 KCNG4Q8TDN1 519 aa13.3□□□□□ -0.28
USP35-207ENST00000530546 POLR3EQ9NVU0 708 aa13.3□□□□□ -0.28
USP35-207ENST00000530546 YEATS4O95619 227 aa13.29□□□□□ -0.28
USP35-207ENST00000530546 CYP2C19P33261 490 aa13.29□□□□□ -0.28
USP35-207ENST00000530546 SCN7AQ01118 1682 aa13.29□□□□□ -0.28
USP35-207ENST00000530546 hCG_1642624A0A1W2PR95 340 aa13.29□□□□□ -0.28
USP35-207ENST00000530546 CYP2D6P10635 497 aa13.29□□□□□ -0.28
USP35-207ENST00000530546 C11orf57Q6ZUT1 292 aaPredicted RBP13.29□□□□□ -0.28
USP35-207ENST00000530546 TRIM22Q8IYM9 498 aa13.29□□□□□ -0.28
USP35-207ENST00000530546 TULP1O00294 542 aaPredicted RBP13.29□□□□□ -0.28
USP35-207ENST00000530546 RGL2O15211 777 aa13.29□□□□□ -0.28
USP35-207ENST00000530546 FMNL1O95466 1100 aaPredicted RBP13.29□□□□□ -0.28
USP35-207ENST00000530546 IFNAR1P17181 557 aa13.29□□□□□ -0.28
USP35-207ENST00000530546 CTR9Q6PD62 1173 aa13.29□□□□□ -0.28
USP35-207ENST00000530546 DZIP1Q86YF9 867 aaKnown RBP13.29□□□□□ -0.28
USP35-207ENST00000530546 C4AP0C0L4 1744 aa13.28□□□□□ -0.28
USP35-207ENST00000530546 C4BP0C0L5 1744 aa13.28□□□□□ -0.28
USP35-207ENST00000530546 ERICH4A6NGS2 130 aa13.28□□□□□ -0.28
USP35-207ENST00000530546 SEMA3EO15041 775 aa13.28□□□□□ -0.28
USP35-207ENST00000530546 CTAGE5O15320 804 aa13.28□□□□□ -0.28
USP35-207ENST00000530546 ATP2B1P20020 1258 aa13.28□□□□□ -0.28
USP35-207ENST00000530546 CEP135Q66GS9 1140 aa13.28□□□□□ -0.28
USP35-207ENST00000530546 FMR1NBQ8N0W7 255 aaPredicted RBP13.28□□□□□ -0.28
USP35-207ENST00000530546 FANCBQ8NB91 859 aa13.28□□□□□ -0.28
USP35-207ENST00000530546 ERO1AQ96HE7 468 aa13.28□□□□□ -0.28
USP35-207ENST00000530546 BTBD18B2RXH4 712 aa13.28□□□□□ -0.28
USP35-207ENST00000530546 WDHD1O75717 1129 aaPredicted RBP13.28□□□□□ -0.28
USP35-207ENST00000530546 FAM47AQ5JRC9 791 aa13.28□□□□□ -0.28
USP35-207ENST00000530546 CCDC186Q7Z3E2 898 aa13.28□□□□□ -0.28
USP35-207ENST00000530546 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms