RNA–Protein interactions for RNA: ENST00000529714.5

SMCO4-205, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 3

Gene SMCO4, Length 355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-205ENST00000529714 SUPT20HL1Q3ZLR7 823 aa16.22■□□□□ 0.19
SMCO4-205ENST00000529714 CREB3L3Q68CJ9 461 aa16.22■□□□□ 0.19
SMCO4-205ENST00000529714 KCNB2Q92953 911 aa16.22■□□□□ 0.19
SMCO4-205ENST00000529714 GLIS2Q9BZE0 524 aaPredicted RBP16.22■□□□□ 0.19
SMCO4-205ENST00000529714 SWAP70Q9UH65 585 aa16.22■□□□□ 0.19
SMCO4-205ENST00000529714 CYP2D7A0A087X1C5 515 aa16.21■□□□□ 0.19
SMCO4-205ENST00000529714 SLC27A2O14975 620 aa16.21■□□□□ 0.19
SMCO4-205ENST00000529714 CYP21A2P08686 494 aa16.21■□□□□ 0.19
SMCO4-205ENST00000529714 TSGA10IPQ3SY00 556 aa16.21■□□□□ 0.19
SMCO4-205ENST00000529714 MAP1SQ66K74 1059 aaPredicted RBP16.21■□□□□ 0.19
SMCO4-205ENST00000529714 USP48Q86UV5 1035 aa16.21■□□□□ 0.19
SMCO4-205ENST00000529714 RNF41Q9H4P4 317 aaPredicted RBP16.21■□□□□ 0.19
SMCO4-205ENST00000529714 ZNF287Q9HBT7 754 aa16.21■□□□□ 0.19
SMCO4-205ENST00000529714 SCAF8Q9UPN6 1271 aaKnown RBP16.21■□□□□ 0.19
SMCO4-205ENST00000529714 FGRP09769 529 aa16.2■□□□□ 0.18
SMCO4-205ENST00000529714 ZKSCAN1P17029 563 aaPredicted RBP16.2■□□□□ 0.18
SMCO4-205ENST00000529714 PDE4BQ07343 736 aa16.2■□□□□ 0.18
SMCO4-205ENST00000529714 NBPF12Q5TAG4 269 aaPredicted RBP16.2■□□□□ 0.18
SMCO4-205ENST00000529714 DCAF15Q66K64 600 aa16.2■□□□□ 0.18
SMCO4-205ENST00000529714 C16orf86Q6ZW13 317 aa16.2■□□□□ 0.18
SMCO4-205ENST00000529714 CDAN1Q8IWY9 1227 aa16.2■□□□□ 0.18
SMCO4-205ENST00000529714 CRACR2BQ8N4Y2 399 aaPredicted RBP16.2■□□□□ 0.18
SMCO4-205ENST00000529714 STAG1Q8WVM7 1258 aa16.2■□□□□ 0.18
SMCO4-205ENST00000529714 CDCA5Q96FF9 252 aa16.2■□□□□ 0.18
SMCO4-205ENST00000529714 NBPF3Q9H094 633 aa16.2■□□□□ 0.18
SMCO4-205ENST00000529714 SSC5DA1L4H1 1573 aa16.2■□□□□ 0.18
SMCO4-205ENST00000529714 TOMM70O94826 608 aa16.19■□□□□ 0.18
SMCO4-205ENST00000529714 NF2P35240 595 aa16.19■□□□□ 0.18
SMCO4-205ENST00000529714 ANAPC15P60006 121 aa16.19■□□□□ 0.18
SMCO4-205ENST00000529714 HAND2P61296 217 aa16.19■□□□□ 0.18
SMCO4-205ENST00000529714 SLC4A8Q2Y0W8 1093 aa16.19■□□□□ 0.18
SMCO4-205ENST00000529714 AKNAD1Q5T1N1 836 aa16.19■□□□□ 0.18
SMCO4-205ENST00000529714 SMC1BQ8NDV3 1235 aa16.19■□□□□ 0.18
SMCO4-205ENST00000529714 RBM46Q8TBY0 533 aaKnown RBP16.19■□□□□ 0.18
SMCO4-205ENST00000529714 TRIM34Q9BYJ4 488 aa16.19■□□□□ 0.18
SMCO4-205ENST00000529714 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.19■□□□□ 0.18
SMCO4-205ENST00000529714 MYH8P13535 1937 aa16.19■□□□□ 0.18
SMCO4-205ENST00000529714 ORC4O43929 436 aa16.18■□□□□ 0.18
SMCO4-205ENST00000529714 ITGBL1O95965 494 aaPredicted RBP16.18■□□□□ 0.18
SMCO4-205ENST00000529714 EVX2Q03828 476 aa16.18■□□□□ 0.18
SMCO4-205ENST00000529714 CTDSPL2Q05D32 466 aa16.18■□□□□ 0.18
SMCO4-205ENST00000529714 KRT32Q14532 448 aa16.18■□□□□ 0.18
SMCO4-205ENST00000529714 MFSD6Q6ZSS7 791 aa16.18■□□□□ 0.18
SMCO4-205ENST00000529714 TBC1D10CQ8IV04 446 aa16.18■□□□□ 0.18
SMCO4-205ENST00000529714 IL17RAQ96F46 866 aa16.18■□□□□ 0.18
SMCO4-205ENST00000529714 DNAJC18Q9H819 358 aa16.18■□□□□ 0.18
SMCO4-205ENST00000529714 CNNM2Q9H8M5 875 aa16.18■□□□□ 0.18
SMCO4-205ENST00000529714 TRPM7Q96QT4 1865 aa16.17■□□□□ 0.18
SMCO4-205ENST00000529714 SMIM22K7EJ46 135 aa16.17■□□□□ 0.18
SMCO4-205ENST00000529714 CDK8P49336 464 aa16.17■□□□□ 0.18
SMCO4-205ENST00000529714 RBM25P49756 843 aaKnown RBP16.17■□□□□ 0.18
SMCO4-205ENST00000529714 PRAMEF18Q5VWM3 479 aa16.17■□□□□ 0.18
SMCO4-205ENST00000529714 TATDN1Q6P1N9 297 aa16.17■□□□□ 0.18
SMCO4-205ENST00000529714 DYNLL2Q96FJ2 89 aa16.17■□□□□ 0.18
SMCO4-205ENST00000529714 C22orf23Q9BZE7 217 aa16.17■□□□□ 0.18
SMCO4-205ENST00000529714 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.17■□□□□ 0.18
SMCO4-205ENST00000529714 E7EWF7 191 aa16.16■□□□□ 0.18
SMCO4-205ENST00000529714 PPP1R12BO60237 982 aaPredicted RBP16.16■□□□□ 0.18
SMCO4-205ENST00000529714 SHMT1P34896 483 aa16.16■□□□□ 0.18
SMCO4-205ENST00000529714 FSTL1Q12841 308 aa16.16■□□□□ 0.18
SMCO4-205ENST00000529714 RASEFQ8IZ41 740 aa16.16■□□□□ 0.18
SMCO4-205ENST00000529714 CCDC17Q96LX7 622 aa16.16■□□□□ 0.18
SMCO4-205ENST00000529714 ZNF341Q9BYN7 854 aa16.16■□□□□ 0.18
SMCO4-205ENST00000529714 KRT23Q9C075 422 aa16.16■□□□□ 0.18
SMCO4-205ENST00000529714 MKNK2Q9HBH9 465 aa16.16■□□□□ 0.18
SMCO4-205ENST00000529714 ZNF112Q9UJU3 913 aa16.16■□□□□ 0.18
SMCO4-205ENST00000529714 SNX14Q9Y5W7 946 aa16.16■□□□□ 0.18
SMCO4-205ENST00000529714 PAPPA2Q9BXP8 1791 aa16.15■□□□□ 0.18
SMCO4-205ENST00000529714 TRAF5O00463 557 aa16.15■□□□□ 0.18
SMCO4-205ENST00000529714 FKBP1BP68106 108 aa16.15■□□□□ 0.18
SMCO4-205ENST00000529714 TRDNQ13061 729 aa16.15■□□□□ 0.18
SMCO4-205ENST00000529714 DLK2Q6UY11 383 aa16.15■□□□□ 0.18
SMCO4-205ENST00000529714 MIGA2Q7L4E1 593 aa16.15■□□□□ 0.18
SMCO4-205ENST00000529714 SLC44A5Q8NCS7 719 aa16.15■□□□□ 0.18
SMCO4-205ENST00000529714 TBC1D32Q96NH3 1257 aa16.15■□□□□ 0.18
SMCO4-205ENST00000529714 TAF6LQ9Y6J9 622 aa16.15■□□□□ 0.18
SMCO4-205ENST00000529714 FAM196BA6NMK8 535 aa16.14■□□□□ 0.17
SMCO4-205ENST00000529714 PHF20L1A8MW92 1017 aa16.14■□□□□ 0.17
SMCO4-205ENST00000529714 RASA1P20936 1047 aa16.14■□□□□ 0.17
SMCO4-205ENST00000529714 MAP3K11Q16584 847 aa16.14■□□□□ 0.17
SMCO4-205ENST00000529714 STOX1Q6ZVD7 989 aa16.14■□□□□ 0.17
SMCO4-205ENST00000529714 RALYLQ86SE5 291 aaKnown RBP16.14■□□□□ 0.17
SMCO4-205ENST00000529714 ZNF444Q8N0Y2 327 aaPredicted RBP16.14■□□□□ 0.17
SMCO4-205ENST00000529714 NCOA7Q8NI08 942 aa16.14■□□□□ 0.17
SMCO4-205ENST00000529714 ESR2Q92731 530 aa16.14■□□□□ 0.17
SMCO4-205ENST00000529714 TM6SF1Q9BZW5 370 aa16.14■□□□□ 0.17
SMCO4-205ENST00000529714 GINM1Q9NU53 330 aa16.14■□□□□ 0.17
SMCO4-205ENST00000529714 TACC3Q9Y6A5 838 aa16.14■□□□□ 0.17
SMCO4-205ENST00000529714 NEDD4P46934 1319 aa16.14■□□□□ 0.17
SMCO4-205ENST00000529714 PASKQ96RG2 1323 aa16.14■□□□□ 0.17
SMCO4-205ENST00000529714 PLIN4Q96Q06 1357 aa16.13■□□□□ 0.17
SMCO4-205ENST00000529714 GREB1LQ9C091 1923 aaPredicted RBP16.13■□□□□ 0.17
SMCO4-205ENST00000529714 UNCXA6NJT0 531 aa16.13■□□□□ 0.17
SMCO4-205ENST00000529714 USP2O75604 605 aaPredicted RBP16.13■□□□□ 0.17
SMCO4-205ENST00000529714 HMGB1P09429 215 aaKnown RBP16.13■□□□□ 0.17
SMCO4-205ENST00000529714 PSMA5P28066 241 aa16.13■□□□□ 0.17
SMCO4-205ENST00000529714 IREB2P48200 963 aaKnown RBP16.13■□□□□ 0.17
SMCO4-205ENST00000529714 CERKLQ49MI3 558 aaPredicted RBP16.13■□□□□ 0.17
SMCO4-205ENST00000529714 KLRG1Q96E93 195 aa16.13■□□□□ 0.17
SMCO4-205ENST00000529714 NEK1Q96PY6 1258 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms