RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 GJB1P08034 283 aa10.66□□□□□ -0.7
TGFBR3-208ENST00000529608 IFIT1P09914 478 aaKnown RBP10.66□□□□□ -0.7
TGFBR3-208ENST00000529608 CCDC84Q86UT8 332 aaPredicted RBP10.66□□□□□ -0.7
TGFBR3-208ENST00000529608 RAET1EQ8TD07 263 aa10.66□□□□□ -0.7
TGFBR3-208ENST00000529608 SSH1Q8WYL5 1049 aa10.66□□□□□ -0.7
TGFBR3-208ENST00000529608 UNC93B1Q9H1C4 597 aa10.66□□□□□ -0.7
TGFBR3-208ENST00000529608 DOCK3Q8IZD9 2030 aa10.66□□□□□ -0.7
TGFBR3-208ENST00000529608 CEP290O15078 2479 aa10.66□□□□□ -0.7
TGFBR3-208ENST00000529608 WDHD1O75717 1129 aaPredicted RBP10.65□□□□□ -0.7
TGFBR3-208ENST00000529608 ELNP15502 786 aa10.65□□□□□ -0.7
TGFBR3-208ENST00000529608 PHKA1P46020 1223 aa10.65□□□□□ -0.7
TGFBR3-208ENST00000529608 WDR66Q8TBY9 1149 aa10.65□□□□□ -0.7
TGFBR3-208ENST00000529608 U2AF1L4Q8WU68 220 aaKnown RBP10.65□□□□□ -0.7
TGFBR3-208ENST00000529608 LPIN2Q92539 896 aa10.65□□□□□ -0.7
TGFBR3-208ENST00000529608 HOOK2Q96ED9 719 aa10.65□□□□□ -0.7
TGFBR3-208ENST00000529608 CRISPLD2Q9H0B8 497 aa10.65□□□□□ -0.7
TGFBR3-208ENST00000529608 RNF208Q9H0X6 261 aa10.65□□□□□ -0.7
TGFBR3-208ENST00000529608 SIL1Q9H173 461 aa10.65□□□□□ -0.7
TGFBR3-208ENST00000529608 GPHNQ9NQX3 736 aaPredicted RBP10.65□□□□□ -0.7
TGFBR3-208ENST00000529608 USP40Q9NVE5 1235 aa10.65□□□□□ -0.7
TGFBR3-208ENST00000529608 PLXNB2O15031 1838 aa10.65□□□□□ -0.71
TGFBR3-208ENST00000529608 SIPA1L1O43166 1804 aa10.64□□□□□ -0.71
TGFBR3-208ENST00000529608 A0A0G2JLL6 359 aaPredicted RBP10.64□□□□□ -0.71
TGFBR3-208ENST00000529608 DDTLA6NHG4 134 aaPredicted RBP10.64□□□□□ -0.71
TGFBR3-208ENST00000529608 SOX1O00570 391 aaPredicted RBP10.64□□□□□ -0.71
TGFBR3-208ENST00000529608 SLC5A1P13866 664 aa10.64□□□□□ -0.71
TGFBR3-208ENST00000529608 ADORA1P30542 326 aa10.64□□□□□ -0.71
TGFBR3-208ENST00000529608 RGS3P49796 1198 aa10.64□□□□□ -0.71
TGFBR3-208ENST00000529608 PRRT2Q7Z6L0 340 aaPredicted RBP10.64□□□□□ -0.71
TGFBR3-208ENST00000529608 SPRYD3Q8NCJ5 442 aa10.64□□□□□ -0.71
TGFBR3-208ENST00000529608 DDX4Q9NQI0 724 aaKnown RBP10.64□□□□□ -0.71
TGFBR3-208ENST00000529608 AFG3L2Q9Y4W6 797 aa10.64□□□□□ -0.71
TGFBR3-208ENST00000529608 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.64□□□□□ -0.71
TGFBR3-208ENST00000529608 ZHX2Q9Y6X8 837 aa10.64□□□□□ -0.71
TGFBR3-208ENST00000529608 LOC285556D6RIA3 1793 aa10.64□□□□□ -0.71
TGFBR3-208ENST00000529608 PTPRCP08575 1304 aa10.63□□□□□ -0.71
TGFBR3-208ENST00000529608 SALL1Q9NSC2 1324 aa10.63□□□□□ -0.71
TGFBR3-208ENST00000529608 CXCL11O14625 94 aa10.63□□□□□ -0.71
TGFBR3-208ENST00000529608 ZBTB7BO15156 539 aaPredicted RBP10.63□□□□□ -0.71
TGFBR3-208ENST00000529608 SGPL1O95470 568 aa10.63□□□□□ -0.71
TGFBR3-208ENST00000529608 LDHBP07195 334 aaKnown RBP10.63□□□□□ -0.71
TGFBR3-208ENST00000529608 PTPRAP18433 802 aa10.63□□□□□ -0.71
TGFBR3-208ENST00000529608 HOXD10P28358 340 aa10.63□□□□□ -0.71
TGFBR3-208ENST00000529608 FLT3LGP49771 235 aa10.63□□□□□ -0.71
TGFBR3-208ENST00000529608 FCGRTP55899 365 aa10.63□□□□□ -0.71
TGFBR3-208ENST00000529608 MAP3K10Q02779 954 aa10.63□□□□□ -0.71
TGFBR3-208ENST00000529608 ATP2B3Q16720 1220 aa10.63□□□□□ -0.71
TGFBR3-208ENST00000529608 SCYL3Q8IZE3 742 aa10.63□□□□□ -0.71
TGFBR3-208ENST00000529608 ZNF384Q8TF68 577 aa10.63□□□□□ -0.71
TGFBR3-208ENST00000529608 PARK7Q99497 189 aaKnown RBP10.63□□□□□ -0.71
TGFBR3-208ENST00000529608 BIN2Q9UBW5 565 aaPredicted RBP10.63□□□□□ -0.71
TGFBR3-208ENST00000529608 PA2G4Q9UQ80 394 aaKnown RBP10.63□□□□□ -0.71
TGFBR3-208ENST00000529608 GAKO14976 1311 aa10.62□□□□□ -0.71
TGFBR3-208ENST00000529608 FAM196BA6NMK8 535 aa10.62□□□□□ -0.71
TGFBR3-208ENST00000529608 ADCY3O60266 1144 aa10.62□□□□□ -0.71
TGFBR3-208ENST00000529608 FARP2O94887 1054 aaPredicted RBP10.62□□□□□ -0.71
TGFBR3-208ENST00000529608 INHAP05111 366 aa10.62□□□□□ -0.71
TGFBR3-208ENST00000529608 FOXK1P85037 733 aa10.62□□□□□ -0.71
TGFBR3-208ENST00000529608 TREML2Q5T2D2 321 aa10.62□□□□□ -0.71
TGFBR3-208ENST00000529608 GADL1Q6ZQY3 521 aa10.62□□□□□ -0.71
TGFBR3-208ENST00000529608 NKX2-3Q8TAU0 364 aa10.62□□□□□ -0.71
TGFBR3-208ENST00000529608 IDI2Q9BXS1 227 aa10.62□□□□□ -0.71
TGFBR3-208ENST00000529608 PPP4R2Q9NY27 417 aa10.62□□□□□ -0.71
TGFBR3-208ENST00000529608 DDX60LQ5H9U9 1706 aaKnown RBP10.61□□□□□ -0.71
TGFBR3-208ENST00000529608 ENTPD3O75355 529 aa10.61□□□□□ -0.71
TGFBR3-208ENST00000529608 UBXN2AP68543 259 aa10.61□□□□□ -0.71
TGFBR3-208ENST00000529608 RASGRF1Q13972 1273 aa10.61□□□□□ -0.71
TGFBR3-208ENST00000529608 DSG2Q14126 1118 aa10.61□□□□□ -0.71
TGFBR3-208ENST00000529608 RRP1BQ14684 758 aaKnown RBP10.61□□□□□ -0.71
TGFBR3-208ENST00000529608 CCDC102BQ68D86 513 aa10.61□□□□□ -0.71
TGFBR3-208ENST00000529608 DIS3LQ8TF46 1054 aaKnown RBP10.61□□□□□ -0.71
TGFBR3-208ENST00000529608 MARVELD3Q96A59 401 aa10.61□□□□□ -0.71
TGFBR3-208ENST00000529608 LRCH3Q96II8 777 aa10.61□□□□□ -0.71
TGFBR3-208ENST00000529608 DEFB118Q96PH6 123 aa10.61□□□□□ -0.71
TGFBR3-208ENST00000529608 HTATIP2Q9BUP3 242 aa10.61□□□□□ -0.71
TGFBR3-208ENST00000529608 CDK5RAP2Q96SN8 1893 aa10.61□□□□□ -0.71
TGFBR3-208ENST00000529608 TRIM75PA6NK02 468 aa10.6□□□□□ -0.71
TGFBR3-208ENST00000529608 CIAO1O76071 339 aa10.6□□□□□ -0.71
TGFBR3-208ENST00000529608 RHBDL3P58872 404 aa10.6□□□□□ -0.71
TGFBR3-208ENST00000529608 TIMM10P62072 90 aa10.6□□□□□ -0.71
TGFBR3-208ENST00000529608 TRIM32Q13049 653 aa10.6□□□□□ -0.71
TGFBR3-208ENST00000529608 PICALMQ13492 652 aa10.6□□□□□ -0.71
TGFBR3-208ENST00000529608 ZNF710Q8N1W2 664 aa10.6□□□□□ -0.71
TGFBR3-208ENST00000529608 CDCA7LQ96GN5 454 aa10.6□□□□□ -0.71
TGFBR3-208ENST00000529608 PAWRQ96IZ0 340 aaKnown RBP10.6□□□□□ -0.71
TGFBR3-208ENST00000529608 PAK6Q9NQU5 681 aaPredicted RBP10.6□□□□□ -0.71
TGFBR3-208ENST00000529608 STAP2Q9UGK3 403 aa10.6□□□□□ -0.71
TGFBR3-208ENST00000529608 DENND2AQ9ULE3 1009 aa10.6□□□□□ -0.71
TGFBR3-208ENST00000529608 LAMA3Q16787 3333 aa10.6□□□□□ -0.71
TGFBR3-208ENST00000529608 MYO5AQ9Y4I1 1855 aaKnown RBP10.59□□□□□ -0.71
TGFBR3-208ENST00000529608 COL6A3P12111 3177 aa10.59□□□□□ -0.71
TGFBR3-208ENST00000529608 TNPO2O14787 897 aaKnown RBP10.59□□□□□ -0.71
TGFBR3-208ENST00000529608 PEX10O60683 326 aa10.59□□□□□ -0.71
TGFBR3-208ENST00000529608 HOXB1P14653 301 aaPredicted RBP10.59□□□□□ -0.71
TGFBR3-208ENST00000529608 BTDP43251 543 aa10.59□□□□□ -0.71
TGFBR3-208ENST00000529608 SLFN5Q08AF3 891 aa10.59□□□□□ -0.71
TGFBR3-208ENST00000529608 IRF5Q13568 498 aa10.59□□□□□ -0.71
TGFBR3-208ENST00000529608 GPR153Q6NV75 609 aa10.59□□□□□ -0.71
TGFBR3-208ENST00000529608 FASTKD5Q7L8L6 764 aaKnown RBP10.59□□□□□ -0.71
TGFBR3-208ENST00000529608 ANKRD13CQ8N6S4 541 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms