RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 BRCA2P51587 3418 aa19.17■□□□□ 0.66
CTSB-215ENST00000528965 TNPO2O14787 897 aaKnown RBP19.17■□□□□ 0.66
CTSB-215ENST00000528965 POLA2Q14181 598 aa19.17■□□□□ 0.66
CTSB-215ENST00000528965 MTFR1Q15390 333 aa19.17■□□□□ 0.66
CTSB-215ENST00000528965 NAA16Q6N069 864 aaPredicted RBP19.17■□□□□ 0.66
CTSB-215ENST00000528965 DHX36Q9H2U1 1008 aaKnown RBP19.17■□□□□ 0.66
CTSB-215ENST00000528965 AS3MTQ9HBK9 375 aa19.17■□□□□ 0.66
CTSB-215ENST00000528965 PTPRFP10586 1907 aa19.17■□□□□ 0.66
CTSB-215ENST00000528965 FAM196BA6NMK8 535 aa19.16■□□□□ 0.66
CTSB-215ENST00000528965 GJB1P08034 283 aa19.16■□□□□ 0.66
CTSB-215ENST00000528965 CCL5P13501 91 aa19.16■□□□□ 0.66
CTSB-215ENST00000528965 ZNF280CQ8ND82 737 aa19.16■□□□□ 0.66
CTSB-215ENST00000528965 SSH3Q8TE77 659 aa19.16■□□□□ 0.66
CTSB-215ENST00000528965 TRIM34Q9BYJ4 488 aa19.16■□□□□ 0.66
CTSB-215ENST00000528965 RNF208Q9H0X6 261 aa19.16■□□□□ 0.66
CTSB-215ENST00000528965 PHIPQ8WWQ0 1821 aa19.16■□□□□ 0.66
CTSB-215ENST00000528965 USP17L5A8MUK1 530 aa19.15■□□□□ 0.66
CTSB-215ENST00000528965 SURF6O75683 361 aaKnown RBP19.15■□□□□ 0.66
CTSB-215ENST00000528965 SLURP2P0DP57 97 aa19.15■□□□□ 0.66
CTSB-215ENST00000528965 CAP2P40123 477 aa19.15■□□□□ 0.66
CTSB-215ENST00000528965 GJA8P48165 433 aa19.15■□□□□ 0.66
CTSB-215ENST00000528965 FAM110CQ1W6H9 321 aa19.15■□□□□ 0.66
CTSB-215ENST00000528965 CCDC84Q86UT8 332 aaPredicted RBP19.15■□□□□ 0.66
CTSB-215ENST00000528965 ITPRIPQ8IWB1 547 aa19.15■□□□□ 0.66
CTSB-215ENST00000528965 COA7Q96BR5 231 aa19.15■□□□□ 0.66
CTSB-215ENST00000528965 SHISA4Q96DD7 197 aa19.15■□□□□ 0.66
CTSB-215ENST00000528965 DBNDD2Q9BQY9 259 aa19.15■□□□□ 0.66
CTSB-215ENST00000528965 AATFQ9NY61 560 aaKnown RBP eCLIP19.15■□□□□ 0.66
CTSB-215ENST00000528965 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.15■□□□□ 0.66
CTSB-215ENST00000528965 PI4KBQ9UBF8 816 aa19.15■□□□□ 0.66
CTSB-215ENST00000528965 MGAMO43451 1857 aa19.14■□□□□ 0.65
CTSB-215ENST00000528965 ADCY3O60266 1144 aa19.14■□□□□ 0.65
CTSB-215ENST00000528965 CAPN2P17655 700 aa19.14■□□□□ 0.65
CTSB-215ENST00000528965 GCLCP48506 637 aaPredicted RBP19.14■□□□□ 0.65
CTSB-215ENST00000528965 ATP8B2P98198 1209 aa19.14■□□□□ 0.65
CTSB-215ENST00000528965 HNRNPUQ00839 825 aaKnown RBP eCLIP19.14■□□□□ 0.65
CTSB-215ENST00000528965 SPP2Q13103 211 aa19.14■□□□□ 0.65
CTSB-215ENST00000528965 PXYLP1Q8TE99 480 aa19.14■□□□□ 0.65
CTSB-215ENST00000528965 SH3RF3Q8TEJ3 882 aaPredicted RBP19.14■□□□□ 0.65
CTSB-215ENST00000528965 ZNF512BQ96KM6 892 aaPredicted RBP19.14■□□□□ 0.65
CTSB-215ENST00000528965 HTATIP2Q9BUP3 242 aa19.14■□□□□ 0.65
CTSB-215ENST00000528965 SNRKQ9NRH2 765 aa19.14■□□□□ 0.65
CTSB-215ENST00000528965 LOC285556D6RIA3 1793 aa19.14■□□□□ 0.65
CTSB-215ENST00000528965 FLT3LGP49771 235 aa19.13■□□□□ 0.65
CTSB-215ENST00000528965 HMGCS2P54868 508 aa19.13■□□□□ 0.65
CTSB-215ENST00000528965 IRF5Q13568 498 aa19.13■□□□□ 0.65
CTSB-215ENST00000528965 TREML2Q5T2D2 321 aa19.13■□□□□ 0.65
CTSB-215ENST00000528965 ANKRD13CQ8N6S4 541 aa19.13■□□□□ 0.65
CTSB-215ENST00000528965 GABRQQ9UN88 632 aa19.13■□□□□ 0.65
CTSB-215ENST00000528965 FLT1P17948 1338 aa19.12■□□□□ 0.65
CTSB-215ENST00000528965 ASNSP08243 561 aa19.12■□□□□ 0.65
CTSB-215ENST00000528965 PPP4CP60510 307 aa19.12■□□□□ 0.65
CTSB-215ENST00000528965 CERS3Q8IU89 383 aa19.12■□□□□ 0.65
CTSB-215ENST00000528965 CRACR2BQ8N4Y2 399 aaPredicted RBP19.12■□□□□ 0.65
CTSB-215ENST00000528965 GINM1Q9NU53 330 aa19.12■□□□□ 0.65
CTSB-215ENST00000528965 ATAD5Q96QE3 1844 aa19.11■□□□□ 0.65
CTSB-215ENST00000528965 INHAP05111 366 aa19.11■□□□□ 0.65
CTSB-215ENST00000528965 HLA-DOAP06340 250 aa19.11■□□□□ 0.65
CTSB-215ENST00000528965 MAPKAPK5Q8IW41 473 aa19.11■□□□□ 0.65
CTSB-215ENST00000528965 U2AF1L4Q8WU68 220 aaKnown RBP19.11■□□□□ 0.65
CTSB-215ENST00000528965 DPF3Q92784 378 aa19.11■□□□□ 0.65
CTSB-215ENST00000528965 C1orf115Q9H7X2 142 aa19.11■□□□□ 0.65
CTSB-215ENST00000528965 TMOD4Q9NZQ9 345 aa19.11■□□□□ 0.65
CTSB-215ENST00000528965 TAOK2Q9UL54 1235 aa19.11■□□□□ 0.65
CTSB-215ENST00000528965 NOP58Q9Y2X3 529 aaKnown RBP19.11■□□□□ 0.65
CTSB-215ENST00000528965 FARP2O94887 1054 aaPredicted RBP19.1■□□□□ 0.65
CTSB-215ENST00000528965 CYP2E1P05181 493 aaPredicted RBP19.1■□□□□ 0.65
CTSB-215ENST00000528965 SH3D19Q5HYK7 790 aa19.1■□□□□ 0.65
CTSB-215ENST00000528965 FOXP4Q8IVH2 680 aaPredicted RBP19.1■□□□□ 0.65
CTSB-215ENST00000528965 TGFBRAP1Q8WUH2 860 aa19.1■□□□□ 0.65
CTSB-215ENST00000528965 UNC93B1Q9H1C4 597 aa19.1■□□□□ 0.65
CTSB-215ENST00000528965 H0YGN5 161 aa19.09■□□□□ 0.65
CTSB-215ENST00000528965 ELNP15502 786 aa19.09■□□□□ 0.65
CTSB-215ENST00000528965 ZAP70P43403 619 aa19.09■□□□□ 0.65
CTSB-215ENST00000528965 IRX3P78415 501 aaPredicted RBP19.09■□□□□ 0.65
CTSB-215ENST00000528965 TMED8Q6PL24 325 aaPredicted RBP19.09■□□□□ 0.65
CTSB-215ENST00000528965 ERC1Q8IUD2 1116 aa19.09■□□□□ 0.65
CTSB-215ENST00000528965 WDR18Q9BV38 432 aa19.09■□□□□ 0.65
CTSB-215ENST00000528965 DBNLQ9UJU6 430 aaKnown RBP19.09■□□□□ 0.65
CTSB-215ENST00000528965 CEP290O15078 2479 aa19.08■□□□□ 0.65
CTSB-215ENST00000528965 SGPL1O95470 568 aa19.08■□□□□ 0.64
CTSB-215ENST00000528965 BACE1P56817 501 aa19.08■□□□□ 0.64
CTSB-215ENST00000528965 MTMR2Q13614 643 aa19.08■□□□□ 0.64
CTSB-215ENST00000528965 MIER1Q8N108 512 aa19.08■□□□□ 0.64
CTSB-215ENST00000528965 ASCC2Q9H1I8 757 aaPredicted RBP19.08■□□□□ 0.64
CTSB-215ENST00000528965 PIH1D3Q9NQM4 214 aaKnown RBP19.08■□□□□ 0.64
CTSB-215ENST00000528965 COLQQ9Y215 455 aaPredicted RBP19.08■□□□□ 0.64
CTSB-215ENST00000528965 NR2E3Q9Y5X4 410 aa19.08■□□□□ 0.64
CTSB-215ENST00000528965 C19orf81C9J6K1 198 aa19.07■□□□□ 0.64
CTSB-215ENST00000528965 ZBTB7BO15156 539 aaPredicted RBP19.07■□□□□ 0.64
CTSB-215ENST00000528965 IDH1O75874 414 aaKnown RBP19.07■□□□□ 0.64
CTSB-215ENST00000528965 CYP7A1P22680 504 aa19.07■□□□□ 0.64
CTSB-215ENST00000528965 RRP1BQ14684 758 aaKnown RBP19.07■□□□□ 0.64
CTSB-215ENST00000528965 UBE2Q1Q7Z7E8 422 aa19.07■□□□□ 0.64
CTSB-215ENST00000528965 ADGRA1Q86SQ6 560 aa19.07■□□□□ 0.64
CTSB-215ENST00000528965 FOCADQ5VW36 1801 aa19.07■□□□□ 0.64
CTSB-215ENST00000528965 METTL16Q86W50 562 aaKnown RBP19.06■□□□□ 0.64
CTSB-215ENST00000528965 GTF3C2Q8WUA4 911 aaPredicted RBP19.06■□□□□ 0.64
CTSB-215ENST00000528965 CCDC8Q9H0W5 538 aaPredicted RBP19.06■□□□□ 0.64
CTSB-215ENST00000528965 TLR7Q9NYK1 1049 aaKnown RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms