RNA–Protein interactions for RNA: ENST00000528840.1

PTP4A2-211, Transcript of protein tyrosine phosphatase type IVA, member 2, human

TSL 2

Gene PTP4A2, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTP4A2-211	ENST00000528840	RBM27	Q9P2N5	1060 aa	Known RBP	14.04	□□□□□ -0.16
PTP4A2-211	ENST00000528840	AGTPBP1	Q9UPW5	1226 aa		14.04	□□□□□ -0.16
PTP4A2-211	ENST00000528840	PDS5A	Q29RF7	1337 aa	Known RBP	14.04	□□□□□ -0.16
PTP4A2-211	ENST00000528840	INHA	P05111	366 aa		14.03	□□□□□ -0.16
PTP4A2-211	ENST00000528840	G3BP1	Q13283	466 aa	Known RBP eCLIP	14.03	□□□□□ -0.16
PTP4A2-211	ENST00000528840	POLA2	Q14181	598 aa		14.03	□□□□□ -0.16
PTP4A2-211	ENST00000528840	PI16	Q6UXB8	463 aa		14.03	□□□□□ -0.16
PTP4A2-211	ENST00000528840	PXYLP1	Q8TE99	480 aa		14.03	□□□□□ -0.16
PTP4A2-211	ENST00000528840	COA7	Q96BR5	231 aa		14.03	□□□□□ -0.16
PTP4A2-211	ENST00000528840	NSUN4	Q96CB9	384 aa	Known RBP	14.03	□□□□□ -0.16
PTP4A2-211	ENST00000528840	DEFB118	Q96PH6	123 aa		14.03	□□□□□ -0.16
PTP4A2-211	ENST00000528840	LRP2BP	Q9P2M1	347 aa		14.03	□□□□□ -0.16
PTP4A2-211	ENST00000528840	NR2E3	Q9Y5X4	410 aa		14.03	□□□□□ -0.16
PTP4A2-211	ENST00000528840	IPO8	O15397	1037 aa	Known RBP	14.02	□□□□□ -0.17
PTP4A2-211	ENST00000528840	FARP2	O94887	1054 aa	Predicted RBP	14.02	□□□□□ -0.17
PTP4A2-211	ENST00000528840	ATXN8OS	P0DMR3	200 aa		14.02	□□□□□ -0.17
PTP4A2-211	ENST00000528840	MTX1	Q13505	466 aa		14.02	□□□□□ -0.17
PTP4A2-211	ENST00000528840	IRF5	Q13568	498 aa		14.02	□□□□□ -0.17
PTP4A2-211	ENST00000528840	RRP1B	Q14684	758 aa	Known RBP	14.02	□□□□□ -0.17
PTP4A2-211	ENST00000528840	ZNF280C	Q8ND82	737 aa		14.02	□□□□□ -0.17
PTP4A2-211	ENST00000528840	OSBPL5	Q9H0X9	879 aa	Predicted RBP	14.02	□□□□□ -0.17
PTP4A2-211	ENST00000528840	RFX7	Q2KHR2	1363 aa		14.01	□□□□□ -0.17
PTP4A2-211	ENST00000528840	MAP4K4	O95819	1239 aa	Predicted RBP	14.01	□□□□□ -0.17
PTP4A2-211	ENST00000528840	GNAI2	P04899	355 aa		14.01	□□□□□ -0.17
PTP4A2-211	ENST00000528840	CAP2	P40123	477 aa		14.01	□□□□□ -0.17
PTP4A2-211	ENST00000528840	TEX11	Q8IYF3	940 aa		14.01	□□□□□ -0.17
PTP4A2-211	ENST00000528840	FRAT1	Q92837	279 aa	Predicted RBP	14.01	□□□□□ -0.17
PTP4A2-211	ENST00000528840	PNMA3	Q9UL41	463 aa		14.01	□□□□□ -0.17
PTP4A2-211	ENST00000528840	TNN	Q9UQP3	1299 aa		14.01	□□□□□ -0.17
PTP4A2-211	ENST00000528840	PNMA6E	A0A0J9YXQ4	647 aa		14	□□□□□ -0.17
PTP4A2-211	ENST00000528840	USP17L5	A8MUK1	530 aa		14	□□□□□ -0.17
PTP4A2-211	ENST00000528840	EVI5	O60447	810 aa		14	□□□□□ -0.17
PTP4A2-211	ENST00000528840	UQCRFS1P1	P0C7P4	283 aa		14	□□□□□ -0.17
PTP4A2-211	ENST00000528840	HMGCS2	P54868	508 aa		14	□□□□□ -0.17
PTP4A2-211	ENST00000528840	PROCA1	Q8NCQ7	364 aa	Predicted RBP	14	□□□□□ -0.17
PTP4A2-211	ENST00000528840	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	14	□□□□□ -0.17
PTP4A2-211	ENST00000528840	CLUAP1	Q96AJ1	413 aa		14	□□□□□ -0.17
PTP4A2-211	ENST00000528840	NOL10	Q9BSC4	688 aa	Known RBP	14	□□□□□ -0.17
PTP4A2-211	ENST00000528840	SNRK	Q9NRH2	765 aa		14	□□□□□ -0.17
PTP4A2-211	ENST00000528840	MGAM	O43451	1857 aa		13.99	□□□□□ -0.17
PTP4A2-211	ENST00000528840	ZBTB7B	O15156	539 aa	Predicted RBP	13.99	□□□□□ -0.17
PTP4A2-211	ENST00000528840	BCAR3	O75815	825 aa		13.99	□□□□□ -0.17
PTP4A2-211	ENST00000528840	ARID4A	P29374	1257 aa	Predicted RBP	13.99	□□□□□ -0.17
PTP4A2-211	ENST00000528840	MCAM	P43121	646 aa		13.99	□□□□□ -0.17
PTP4A2-211	ENST00000528840	GCLC	P48506	637 aa	Predicted RBP	13.99	□□□□□ -0.17
PTP4A2-211	ENST00000528840	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.99	□□□□□ -0.17
PTP4A2-211	ENST00000528840	PAWR	Q96IZ0	340 aa	Known RBP	13.99	□□□□□ -0.17
PTP4A2-211	ENST00000528840	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.99	□□□□□ -0.17
PTP4A2-211	ENST00000528840	PI4KB	Q9UBF8	816 aa		13.99	□□□□□ -0.17
PTP4A2-211	ENST00000528840	DOCK2	Q92608	1830 aa		13.99	□□□□□ -0.17
PTP4A2-211	ENST00000528840	BAG3	O95817	575 aa		13.98	□□□□□ -0.17
PTP4A2-211	ENST00000528840	TRIM27	P14373	513 aa		13.98	□□□□□ -0.17
PTP4A2-211	ENST00000528840	FAM110C	Q1W6H9	321 aa		13.98	□□□□□ -0.17
PTP4A2-211	ENST00000528840	NAA16	Q6N069	864 aa	Predicted RBP	13.98	□□□□□ -0.17
PTP4A2-211	ENST00000528840	ATF7IP	Q6VMQ6	1270 aa		13.98	□□□□□ -0.17
PTP4A2-211	ENST00000528840	TGFBRAP1	Q8WUH2	860 aa		13.98	□□□□□ -0.17
PTP4A2-211	ENST00000528840	TBC1D2	Q9BYX2	928 aa		13.98	□□□□□ -0.17
PTP4A2-211	ENST00000528840	AS3MT	Q9HBK9	375 aa		13.98	□□□□□ -0.17
PTP4A2-211	ENST00000528840	PAK6	Q9NQU5	681 aa	Predicted RBP	13.98	□□□□□ -0.17
PTP4A2-211	ENST00000528840	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.98	□□□□□ -0.17	3e-7	■□□□□ 10.4
PTP4A2-211	ENST00000528840	GJD2	Q9UKL4	321 aa		13.98	□□□□□ -0.17
PTP4A2-211	ENST00000528840	CAPN2	P17655	700 aa		13.97	□□□□□ -0.17
PTP4A2-211	ENST00000528840	JAG1	P78504	1218 aa		13.97	□□□□□ -0.17
PTP4A2-211	ENST00000528840	SH3D19	Q5HYK7	790 aa		13.97	□□□□□ -0.17
PTP4A2-211	ENST00000528840	CCDC158	Q5M9N0	1113 aa		13.97	□□□□□ -0.17
PTP4A2-211	ENST00000528840	TTC39A	Q5SRH9	613 aa		13.97	□□□□□ -0.17
PTP4A2-211	ENST00000528840	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.97	□□□□□ -0.17
PTP4A2-211	ENST00000528840	CRISPLD2	Q9H0B8	497 aa		13.97	□□□□□ -0.17
PTP4A2-211	ENST00000528840	STAP2	Q9UGK3	403 aa		13.97	□□□□□ -0.17
PTP4A2-211	ENST00000528840	HERC5	Q9UII4	1024 aa	Known RBP	13.97	□□□□□ -0.17
PTP4A2-211	ENST00000528840	PEX10	O60683	326 aa		13.96	□□□□□ -0.17
PTP4A2-211	ENST00000528840	PPP4C	P60510	307 aa		13.96	□□□□□ -0.17
PTP4A2-211	ENST00000528840	TRIM32	Q13049	653 aa		13.96	□□□□□ -0.17
PTP4A2-211	ENST00000528840	OS9	Q13438	667 aa	Predicted RBP	13.96	□□□□□ -0.17
PTP4A2-211	ENST00000528840	NECAB2	Q7Z6G3	386 aa		13.96	□□□□□ -0.17
PTP4A2-211	ENST00000528840	MAPKAPK5	Q8IW41	473 aa		13.96	□□□□□ -0.17
PTP4A2-211	ENST00000528840	P2RX7	Q99572	595 aa	Known RBP	13.96	□□□□□ -0.17
PTP4A2-211	ENST00000528840	WDR18	Q9BV38	432 aa		13.96	□□□□□ -0.17
PTP4A2-211	ENST00000528840	TRIM34	Q9BYJ4	488 aa		13.96	□□□□□ -0.17
PTP4A2-211	ENST00000528840	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.96	□□□□□ -0.17	4e-8	■■■■■ 32.9
PTP4A2-211	ENST00000528840	DHX36	Q9H2U1	1008 aa	Known RBP	13.96	□□□□□ -0.17
PTP4A2-211	ENST00000528840	PRO3102	Q9H379	93 aa		13.96	□□□□□ -0.17
PTP4A2-211	ENST00000528840	HMX1	Q9NP08	348 aa	Predicted RBP	13.96	□□□□□ -0.17
PTP4A2-211	ENST00000528840	TMOD4	Q9NZQ9	345 aa		13.96	□□□□□ -0.17
PTP4A2-211	ENST00000528840	PALD1	Q9ULE6	856 aa		13.96	□□□□□ -0.17
PTP4A2-211	ENST00000528840	PHIP	Q8WWQ0	1821 aa		13.96	□□□□□ -0.17
PTP4A2-211	ENST00000528840	DOCK1	Q14185	1865 aa		13.95	□□□□□ -0.18
PTP4A2-211	ENST00000528840	SURF6	O75683	361 aa	Known RBP	13.95	□□□□□ -0.18
PTP4A2-211	ENST00000528840	CYP2E1	P05181	493 aa	Predicted RBP	13.95	□□□□□ -0.18
PTP4A2-211	ENST00000528840	PLCG2	P16885	1265 aa		13.95	□□□□□ -0.18
PTP4A2-211	ENST00000528840	CYP2B6	P20813	491 aa		13.95	□□□□□ -0.18
PTP4A2-211	ENST00000528840	BACE1	P56817	501 aa		13.95	□□□□□ -0.18
PTP4A2-211	ENST00000528840	IRX3	P78415	501 aa	Predicted RBP	13.95	□□□□□ -0.18
PTP4A2-211	ENST00000528840	MTMR2	Q13614	643 aa		13.95	□□□□□ -0.18
PTP4A2-211	ENST00000528840	TNNI3K	Q59H18	835 aa		13.95	□□□□□ -0.18
PTP4A2-211	ENST00000528840	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.95	□□□□□ -0.18
PTP4A2-211	ENST00000528840	TMEM57	Q8N5G2	664 aa		13.95	□□□□□ -0.18
PTP4A2-211	ENST00000528840	DIS3L	Q8TF46	1054 aa	Known RBP	13.95	□□□□□ -0.18
PTP4A2-211	ENST00000528840	DBNDD2	Q9BQY9	259 aa		13.95	□□□□□ -0.18
PTP4A2-211	ENST00000528840	SAP30BP	Q9UHR5	308 aa	Known RBP	13.95	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms