RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 RAI14Q9P0K7 980 aa14.47□□□□□ -0.09
CAPN1-204ENST00000526468 PNMA3Q9UL41 463 aa14.47□□□□□ -0.09
CAPN1-204ENST00000526468 AGTPBP1Q9UPW5 1226 aa14.47□□□□□ -0.09
CAPN1-204ENST00000526468 ADCY3O60266 1144 aa14.46□□□□□ -0.09
CAPN1-204ENST00000526468 INHAP05111 366 aa14.46□□□□□ -0.09
CAPN1-204ENST00000526468 RARSP54136 660 aaKnown RBP14.46□□□□□ -0.09
CAPN1-204ENST00000526468 GSTO1P78417 241 aa14.46□□□□□ -0.09
CAPN1-204ENST00000526468 SPATA5Q8NB90 893 aa14.46□□□□□ -0.09
CAPN1-204ENST00000526468 U2AF1L4Q8WU68 220 aaKnown RBP14.46□□□□□ -0.09
CAPN1-204ENST00000526468 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.46□□□□□ -0.09
CAPN1-204ENST00000526468 BAZ2AQ9UIF9 1905 aaKnown RBP14.46□□□□□ -0.09
CAPN1-204ENST00000526468 GPR75-ASB3A0A0A6YYF3 556 aa14.45□□□□□ -0.1
CAPN1-204ENST00000526468 FLT3LGP49771 235 aa14.45□□□□□ -0.1
CAPN1-204ENST00000526468 RHBDL3P58872 404 aa14.45□□□□□ -0.1
CAPN1-204ENST00000526468 MTX1Q13505 466 aa14.45□□□□□ -0.1
CAPN1-204ENST00000526468 TREML2Q5T2D2 321 aa14.45□□□□□ -0.1
CAPN1-204ENST00000526468 ANKRD13CQ8N6S4 541 aa14.45□□□□□ -0.1
CAPN1-204ENST00000526468 ZNF384Q8TF68 577 aa14.45□□□□□ -0.1
CAPN1-204ENST00000526468 FAM163AQ96GL9 167 aaPredicted RBP14.45□□□□□ -0.1
CAPN1-204ENST00000526468 OSBPL5Q9H0X9 879 aaPredicted RBP14.45□□□□□ -0.1
CAPN1-204ENST00000526468 HMG20BQ9P0W2 317 aa14.45□□□□□ -0.1
CAPN1-204ENST00000526468 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.45□□□□□ -0.1
CAPN1-204ENST00000526468 PARP14Q460N5 1801 aa14.45□□□□□ -0.1
CAPN1-204ENST00000526468 ARID4AP29374 1257 aaPredicted RBP14.44□□□□□ -0.1
CAPN1-204ENST00000526468 TBC1D9Q6ZT07 1266 aa14.44□□□□□ -0.1
CAPN1-204ENST00000526468 TEX11Q8IYF3 940 aa14.44□□□□□ -0.1
CAPN1-204ENST00000526468 NSUN4Q96CB9 384 aaKnown RBP14.44□□□□□ -0.1
CAPN1-204ENST00000526468 NOL10Q9BSC4 688 aaKnown RBP14.44□□□□□ -0.1
CAPN1-204ENST00000526468 GNAI2P04899 355 aa14.43□□□□□ -0.1
CAPN1-204ENST00000526468 LDHCP07864 332 aa14.43□□□□□ -0.1
CAPN1-204ENST00000526468 TRIM27P14373 513 aa14.43□□□□□ -0.1
CAPN1-204ENST00000526468 MCAMP43121 646 aa14.43□□□□□ -0.1
CAPN1-204ENST00000526468 HMGCS2P54868 508 aa14.43□□□□□ -0.1
CAPN1-204ENST00000526468 MAP3K10Q02779 954 aa14.43□□□□□ -0.1
CAPN1-204ENST00000526468 FAM110CQ1W6H9 321 aa14.43□□□□□ -0.1
CAPN1-204ENST00000526468 PROCA1Q8NCQ7 364 aaPredicted RBP14.43□□□□□ -0.1
CAPN1-204ENST00000526468 ARHGAP45Q92619 1136 aa14.43□□□□□ -0.1
CAPN1-204ENST00000526468 FRAT1Q92837 279 aaPredicted RBP14.43□□□□□ -0.1
CAPN1-204ENST00000526468 COA7Q96BR5 231 aa14.43□□□□□ -0.1
CAPN1-204ENST00000526468 LAMA3Q16787 3333 aa14.42□□□□□ -0.1
CAPN1-204ENST00000526468 PNMA6EA0A0J9YXQ4 647 aa14.42□□□□□ -0.1
CAPN1-204ENST00000526468 NPM3O75607 178 aaKnown RBP14.42□□□□□ -0.1
CAPN1-204ENST00000526468 G3BP1Q13283 466 aaKnown RBP eCLIP14.42□□□□□ -0.17e-8■■■□□ 15.6
CAPN1-204ENST00000526468 IRF5Q13568 498 aa14.42□□□□□ -0.1
CAPN1-204ENST00000526468 UBE2Q1Q7Z7E8 422 aa14.42□□□□□ -0.1
CAPN1-204ENST00000526468 ZNF280CQ8ND82 737 aa14.42□□□□□ -0.1
CAPN1-204ENST00000526468 DEFB118Q96PH6 123 aa14.42□□□□□ -0.1
CAPN1-204ENST00000526468 LRP2BPQ9P2M1 347 aa14.42□□□□□ -0.1
CAPN1-204ENST00000526468 TNNQ9UQP3 1299 aa14.42□□□□□ -0.1
CAPN1-204ENST00000526468 COL11A1P12107 1806 aaPredicted RBP14.42□□□□□ -0.1
CAPN1-204ENST00000526468 A0A0G2JMZ2 1700 aa14.41□□□□□ -0.1
CAPN1-204ENST00000526468 ZNFX1Q9P2E3 1918 aaKnown RBP14.41□□□□□ -0.1
CAPN1-204ENST00000526468 IPO8O15397 1037 aaKnown RBP14.41□□□□□ -0.1
CAPN1-204ENST00000526468 TBC1D12O60347 775 aa14.41□□□□□ -0.1
CAPN1-204ENST00000526468 MAP4K4O95819 1239 aaPredicted RBP14.41□□□□□ -0.1
CAPN1-204ENST00000526468 UQCRFS1P1P0C7P4 283 aa14.41□□□□□ -0.1
CAPN1-204ENST00000526468 SPP2Q13103 211 aa14.41□□□□□ -0.1
CAPN1-204ENST00000526468 PABPC4Q13310 644 aaKnown RBP eCLIP14.41□□□□□ -0.1
CAPN1-204ENST00000526468 OS9Q13438 667 aaPredicted RBP14.41□□□□□ -0.1
CAPN1-204ENST00000526468 TTC39AQ5SRH9 613 aa14.41□□□□□ -0.1
CAPN1-204ENST00000526468 ATF7IPQ6VMQ6 1270 aa14.41□□□□□ -0.1
CAPN1-204ENST00000526468 PXYLP1Q8TE99 480 aa14.41□□□□□ -0.1
CAPN1-204ENST00000526468 SH3RF3Q8TEJ3 882 aaPredicted RBP14.41□□□□□ -0.1
CAPN1-204ENST00000526468 CLUAP1Q96AJ1 413 aa14.41□□□□□ -0.1
CAPN1-204ENST00000526468 TRIM34Q9BYJ4 488 aa14.41□□□□□ -0.1
CAPN1-204ENST00000526468 AS3MTQ9HBK9 375 aa14.41□□□□□ -0.1
CAPN1-204ENST00000526468 RBM27Q9P2N5 1060 aaKnown RBP14.41□□□□□ -0.1
CAPN1-204ENST00000526468 NR2E3Q9Y5X4 410 aa14.41□□□□□ -0.1
CAPN1-204ENST00000526468 PLXNA1Q9UIW2 1896 aa14.41□□□□□ -0.1
CAPN1-204ENST00000526468 SGPL1O95470 568 aa14.4□□□□□ -0.1
CAPN1-204ENST00000526468 MTMR2Q13614 643 aa14.4□□□□□ -0.1
CAPN1-204ENST00000526468 TBC1D2Q9BYX2 928 aa14.4□□□□□ -0.1
CAPN1-204ENST00000526468 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.4□□□□□ -0.1
CAPN1-204ENST00000526468 SNRKQ9NRH2 765 aa14.4□□□□□ -0.1
CAPN1-204ENST00000526468 AATFQ9NY61 560 aaKnown RBP eCLIP14.4□□□□□ -0.1
CAPN1-204ENST00000526468 HERC5Q9UII4 1024 aaKnown RBP14.4□□□□□ -0.1
CAPN1-204ENST00000526468 FLT1P17948 1338 aa14.4□□□□□ -0.1
CAPN1-204ENST00000526468 USP17L5A8MUK1 530 aa14.39□□□□□ -0.11
CAPN1-204ENST00000526468 EVI5O60447 810 aa14.39□□□□□ -0.11
CAPN1-204ENST00000526468 TFRCP02786 760 aaKnown RBP14.39□□□□□ -0.11
CAPN1-204ENST00000526468 HMGCRP04035 888 aa14.39□□□□□ -0.11
CAPN1-204ENST00000526468 CAP2P40123 477 aa14.39□□□□□ -0.11
CAPN1-204ENST00000526468 GCLCP48506 637 aaPredicted RBP14.39□□□□□ -0.11
CAPN1-204ENST00000526468 IRX3P78415 501 aaPredicted RBP14.39□□□□□ -0.11
CAPN1-204ENST00000526468 NAA16Q6N069 864 aaPredicted RBP14.39□□□□□ -0.11
CAPN1-204ENST00000526468 MAPKAPK5Q8IW41 473 aa14.39□□□□□ -0.11
CAPN1-204ENST00000526468 ASCC2Q9H1I8 757 aaPredicted RBP14.39□□□□□ -0.11
CAPN1-204ENST00000526468 PAK6Q9NQU5 681 aaPredicted RBP14.39□□□□□ -0.11
CAPN1-204ENST00000526468 ZNF236Q9UL36 1845 aa14.38□□□□□ -0.11
CAPN1-204ENST00000526468 CUL9Q8IWT3 2517 aa14.38□□□□□ -0.11
CAPN1-204ENST00000526468 ZBTB7BO15156 539 aaPredicted RBP14.38□□□□□ -0.11
CAPN1-204ENST00000526468 BCAR3O75815 825 aa14.38□□□□□ -0.11
CAPN1-204ENST00000526468 PLCG2P16885 1265 aa14.38□□□□□ -0.11
CAPN1-204ENST00000526468 RRP1BQ14684 758 aaKnown RBP14.38□□□□□ -0.11
CAPN1-204ENST00000526468 CRACR2BQ8N4Y2 399 aaPredicted RBP14.38□□□□□ -0.11
CAPN1-204ENST00000526468 LTBP2Q14767 1821 aa14.38□□□□□ -0.11
CAPN1-204ENST00000526468 RLFQ13129 1914 aa14.37□□□□□ -0.11
CAPN1-204ENST00000526468 GDF11O95390 407 aa14.37□□□□□ -0.11
CAPN1-204ENST00000526468 BAG3O95817 575 aa14.37□□□□□ -0.11
CAPN1-204ENST00000526468 TNNI3KQ59H18 835 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms