RNA–Protein interactions for RNA: ENST00000526141.1

TRAPPC4-207, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 392 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-207ENST00000526141 GTF3C2Q8WUA4 911 aaPredicted RBP4.32□□□□□ -1.72
TRAPPC4-207ENST00000526141 TCF12Q99081 682 aa4.32□□□□□ -1.72
TRAPPC4-207ENST00000526141 LNPKQ9C0E8 428 aa4.32□□□□□ -1.72
TRAPPC4-207ENST00000526141 NLRP2Q9NX02 1062 aa4.32□□□□□ -1.72
TRAPPC4-207ENST00000526141 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.32□□□□□ -1.72
TRAPPC4-207ENST00000526141 PCOLCE2Q9UKZ9 415 aa4.32□□□□□ -1.72
TRAPPC4-207ENST00000526141 BRPF3Q9ULD4 1205 aa4.32□□□□□ -1.72
TRAPPC4-207ENST00000526141 TMPRSS2O15393 492 aa4.31□□□□□ -1.72
TRAPPC4-207ENST00000526141 MARCH6O60337 910 aa4.31□□□□□ -1.72
TRAPPC4-207ENST00000526141 RNGTTO60942 597 aaKnown RBP4.31□□□□□ -1.72
TRAPPC4-207ENST00000526141 ECEL1O95672 775 aa4.31□□□□□ -1.72
TRAPPC4-207ENST00000526141 ZSCAN22P10073 491 aaPredicted RBP4.31□□□□□ -1.72
TRAPPC4-207ENST00000526141 ID3Q02535 119 aa4.31□□□□□ -1.72
TRAPPC4-207ENST00000526141 PTPN12Q05209 780 aaKnown RBP4.31□□□□□ -1.72
TRAPPC4-207ENST00000526141 ZNF211Q13398 564 aaPredicted RBP4.31□□□□□ -1.72
TRAPPC4-207ENST00000526141 ZNF662Q6ZS27 426 aa4.31□□□□□ -1.72
TRAPPC4-207ENST00000526141 SYDE1Q6ZW31 735 aaPredicted RBP4.31□□□□□ -1.72
TRAPPC4-207ENST00000526141 FANCD2OSQ96PS1 177 aa4.31□□□□□ -1.72
TRAPPC4-207ENST00000526141 DNAJC2Q99543 621 aaKnown RBP4.31□□□□□ -1.72
TRAPPC4-207ENST00000526141 TINF2Q9BSI4 451 aa4.31□□□□□ -1.72
TRAPPC4-207ENST00000526141 DUSP23Q9BVJ7 150 aa4.31□□□□□ -1.72
TRAPPC4-207ENST00000526141 ZNF576Q9H609 170 aa4.31□□□□□ -1.72
TRAPPC4-207ENST00000526141 TLDC2A0PJX2 215 aa4.3□□□□□ -1.72
TRAPPC4-207ENST00000526141 NFIBO00712 420 aa4.3□□□□□ -1.72
TRAPPC4-207ENST00000526141 POLR3DP05423 398 aaPredicted RBP4.3□□□□□ -1.72
TRAPPC4-207ENST00000526141 LIG1P18858 919 aa4.3□□□□□ -1.72
TRAPPC4-207ENST00000526141 ITPKAP23677 461 aa4.3□□□□□ -1.72
TRAPPC4-207ENST00000526141 FGD1P98174 961 aa4.3□□□□□ -1.72
TRAPPC4-207ENST00000526141 IKZF1Q13422 519 aa4.3□□□□□ -1.72
TRAPPC4-207ENST00000526141 SF3B2Q13435 895 aaKnown RBP4.3□□□□□ -1.72
TRAPPC4-207ENST00000526141 KIAA0319Q5VV43 1072 aa4.3□□□□□ -1.72
TRAPPC4-207ENST00000526141 MPZL3Q6UWV2 235 aa4.3□□□□□ -1.72
TRAPPC4-207ENST00000526141 LCNL1Q6ZST4 164 aa4.3□□□□□ -1.72
TRAPPC4-207ENST00000526141 NT5DC4Q86YG4 428 aa4.3□□□□□ -1.72
TRAPPC4-207ENST00000526141 C1QL4Q86Z23 238 aa4.3□□□□□ -1.72
TRAPPC4-207ENST00000526141 GJD3Q8N144 294 aa4.3□□□□□ -1.72
TRAPPC4-207ENST00000526141 TNKS2Q9H2K2 1166 aa4.3□□□□□ -1.72
TRAPPC4-207ENST00000526141 CCSER2Q9H7U1 834 aa4.3□□□□□ -1.72
TRAPPC4-207ENST00000526141 KRT82Q9NSB4 513 aa4.3□□□□□ -1.72
TRAPPC4-207ENST00000526141 PLAGL2Q9UPG8 496 aa4.3□□□□□ -1.72
TRAPPC4-207ENST00000526141 GLI1P08151 1106 aa4.29□□□□□ -1.72
TRAPPC4-207ENST00000526141 ATP2B1P20020 1258 aa4.29□□□□□ -1.72
TRAPPC4-207ENST00000526141 ARHGAP4P98171 946 aa4.29□□□□□ -1.72
TRAPPC4-207ENST00000526141 ZP2Q05996 745 aa4.29□□□□□ -1.72
TRAPPC4-207ENST00000526141 KIF4BQ2VIQ3 1234 aa4.29□□□□□ -1.72
TRAPPC4-207ENST00000526141 RPS26P11Q5JNZ5 115 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC4-207ENST00000526141 C9orf131Q5VYM1 1079 aa4.29□□□□□ -1.72
TRAPPC4-207ENST00000526141 SDE2Q6IQ49 451 aa4.29□□□□□ -1.72
TRAPPC4-207ENST00000526141 TTLL10Q6ZVT0 673 aa4.29□□□□□ -1.72
TRAPPC4-207ENST00000526141 METTL16Q86W50 562 aaKnown RBP4.29□□□□□ -1.72
TRAPPC4-207ENST00000526141 AMIGO3Q86WK7 504 aa4.29□□□□□ -1.72
TRAPPC4-207ENST00000526141 LIN37Q96GY3 246 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC4-207ENST00000526141 TGIF2Q9GZN2 237 aa4.29□□□□□ -1.72
TRAPPC4-207ENST00000526141 EHD4Q9H223 541 aa4.29□□□□□ -1.72
TRAPPC4-207ENST00000526141 SSU72Q9NP77 194 aaKnown RBP4.29□□□□□ -1.72
TRAPPC4-207ENST00000526141 ANO2Q9NQ90 1003 aa4.29□□□□□ -1.72
TRAPPC4-207ENST00000526141 DISC1Q9NRI5 854 aa4.29□□□□□ -1.72
TRAPPC4-207ENST00000526141 METTL5Q9NRN9 209 aaKnown RBP4.29□□□□□ -1.72
TRAPPC4-207ENST00000526141 GTF2IRD1Q9UHL9 959 aa4.29□□□□□ -1.72
TRAPPC4-207ENST00000526141 CTNND2Q9UQB3 1225 aa4.29□□□□□ -1.72
TRAPPC4-207ENST00000526141 IGF2BP3O00425 579 aaKnown RBP eCLIP4.28□□□□□ -1.72
TRAPPC4-207ENST00000526141 FZD6O60353 706 aa4.28□□□□□ -1.72
TRAPPC4-207ENST00000526141 RAB11FIP3O75154 756 aa4.28□□□□□ -1.72
TRAPPC4-207ENST00000526141 LEFTY1O75610 366 aa4.28□□□□□ -1.72
TRAPPC4-207ENST00000526141 P4HBP07237 508 aaKnown RBP4.28□□□□□ -1.72
TRAPPC4-207ENST00000526141 ITIH2P19823 946 aa4.28□□□□□ -1.72
TRAPPC4-207ENST00000526141 FKBP4Q02790 459 aaKnown RBP eCLIP4.28□□□□□ -1.72
TRAPPC4-207ENST00000526141 GNL2Q13823 731 aaKnown RBP4.28□□□□□ -1.72
TRAPPC4-207ENST00000526141 TTLL4Q14679 1199 aa4.28□□□□□ -1.72
TRAPPC4-207ENST00000526141 ECM1Q16610 540 aa4.28□□□□□ -1.72
TRAPPC4-207ENST00000526141 CCDC144BQ3MJ40 725 aa4.28□□□□□ -1.72
TRAPPC4-207ENST00000526141 TMEM67Q5HYA8 995 aa4.28□□□□□ -1.72
TRAPPC4-207ENST00000526141 LDLRAD1Q5T700 205 aa4.28□□□□□ -1.72
TRAPPC4-207ENST00000526141 FBXO15Q8NCQ5 510 aaPredicted RBP4.28□□□□□ -1.72
TRAPPC4-207ENST00000526141 MICAL1Q8TDZ2 1067 aa4.28□□□□□ -1.72
TRAPPC4-207ENST00000526141 DHX38Q92620 1227 aaKnown RBP4.28□□□□□ -1.72
TRAPPC4-207ENST00000526141 CCDC86Q9H6F5 360 aaKnown RBP4.28□□□□□ -1.72
TRAPPC4-207ENST00000526141 METTL14Q9HCE5 456 aaKnown RBP4.28□□□□□ -1.72
TRAPPC4-207ENST00000526141 PRDM7Q9NQW5 492 aa4.28□□□□□ -1.72
TRAPPC4-207ENST00000526141 LMCD1Q9NZU5 365 aa4.28□□□□□ -1.72
TRAPPC4-207ENST00000526141 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.28□□□□□ -1.72
TRAPPC4-207ENST00000526141 PLEKHD1A6NEE1 506 aa4.27□□□□□ -1.73
TRAPPC4-207ENST00000526141 HCLS1P14317 486 aaPredicted RBP4.27□□□□□ -1.73
TRAPPC4-207ENST00000526141 MTMR3Q13615 1198 aa4.27□□□□□ -1.73
TRAPPC4-207ENST00000526141 SOGA3Q5TF21 947 aa4.27□□□□□ -1.73
TRAPPC4-207ENST00000526141 CCDC181Q5TID7 509 aa4.27□□□□□ -1.73
TRAPPC4-207ENST00000526141 EGFLAMQ63HQ2 1017 aa4.27□□□□□ -1.73
TRAPPC4-207ENST00000526141 CYFIP1Q7L576 1253 aa4.27□□□□□ -1.73
TRAPPC4-207ENST00000526141 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.27□□□□□ -1.73
TRAPPC4-207ENST00000526141 FAM9AQ8IZU1 332 aaPredicted RBP4.27□□□□□ -1.73
TRAPPC4-207ENST00000526141 WDR89Q96FK6 387 aaPredicted RBP4.27□□□□□ -1.73
TRAPPC4-207ENST00000526141 KIRREL1Q96J84 757 aa4.27□□□□□ -1.73
TRAPPC4-207ENST00000526141 PSMD1Q99460 953 aa4.27□□□□□ -1.73
TRAPPC4-207ENST00000526141 RBCK1Q9BYM8 510 aa4.27□□□□□ -1.73
TRAPPC4-207ENST00000526141 TBX22Q9Y458 520 aa4.27□□□□□ -1.73
TRAPPC4-207ENST00000526141 U3KQE9 123 aa4.27□□□□□ -1.73
TRAPPC4-207ENST00000526141 SBNO2Q9Y2G9 1366 aa4.27□□□□□ -1.73
TRAPPC4-207ENST00000526141 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.26□□□□□ -1.73
TRAPPC4-207ENST00000526141 GSTP1P09211 210 aaKnown RBP4.26□□□□□ -1.73
TRAPPC4-207ENST00000526141 TMEM253P0C7T8 217 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms