RNA–Protein interactions for RNA: ENST00000525874.1

SYVN1-205, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-205ENST00000525874 MEIS3Q99687 375 aa13.7□□□□□ -0.22
SYVN1-205ENST00000525874 API5Q9BZZ5 524 aaKnown RBP13.7□□□□□ -0.22
SYVN1-205ENST00000525874 OSBPL5Q9H0X9 879 aaPredicted RBP13.7□□□□□ -0.22
SYVN1-205ENST00000525874 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.7□□□□□ -0.22
SYVN1-205ENST00000525874 AKAP2Q9Y2D5 859 aa13.7□□□□□ -0.22
SYVN1-205ENST00000525874 GCLCP48506 637 aaPredicted RBP13.69□□□□□ -0.22
SYVN1-205ENST00000525874 TFCP2Q12800 502 aa13.69□□□□□ -0.22
SYVN1-205ENST00000525874 SPP2Q13103 211 aa13.69□□□□□ -0.22
SYVN1-205ENST00000525874 ZNF280CQ8ND82 737 aa13.69□□□□□ -0.22
SYVN1-205ENST00000525874 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.69□□□□□ -0.22
SYVN1-205ENST00000525874 LAMA3Q16787 3333 aa13.69□□□□□ -0.22
SYVN1-205ENST00000525874 COL2A1P02458 1487 aaPredicted RBP13.68□□□□□ -0.22
SYVN1-205ENST00000525874 SOX1O00570 391 aaPredicted RBP13.68□□□□□ -0.22
SYVN1-205ENST00000525874 MAP4K4O95819 1239 aaPredicted RBP13.68□□□□□ -0.22
SYVN1-205ENST00000525874 HMGCRP04035 888 aa13.68□□□□□ -0.22
SYVN1-205ENST00000525874 LDHCP07864 332 aa13.68□□□□□ -0.22
SYVN1-205ENST00000525874 CT47B1P0C2W7 299 aaPredicted RBP13.68□□□□□ -0.22
SYVN1-205ENST00000525874 HMGCS2P54868 508 aa13.68□□□□□ -0.22
SYVN1-205ENST00000525874 NECAB2Q7Z6G3 386 aa13.68□□□□□ -0.22
SYVN1-205ENST00000525874 TRMT2AQ8IZ69 625 aaKnown RBP13.68□□□□□ -0.22
SYVN1-205ENST00000525874 DIS3LQ8TF46 1054 aaKnown RBP13.68□□□□□ -0.22
SYVN1-205ENST00000525874 NSUN4Q96CB9 384 aaKnown RBP13.68□□□□□ -0.22
SYVN1-205ENST00000525874 TBC1D2Q9BYX2 928 aa13.68□□□□□ -0.22
SYVN1-205ENST00000525874 HMG20BQ9P0W2 317 aa13.68□□□□□ -0.22
SYVN1-205ENST00000525874 STAP2Q9UGK3 403 aa13.68□□□□□ -0.22
SYVN1-205ENST00000525874 SRGAP3O43295 1099 aa13.67□□□□□ -0.22
SYVN1-205ENST00000525874 CAP2P40123 477 aa13.67□□□□□ -0.22
SYVN1-205ENST00000525874 GSTO1P78417 241 aa13.67□□□□□ -0.22
SYVN1-205ENST00000525874 PABPC4Q13310 644 aaKnown RBP eCLIP13.67□□□□□ -0.22
SYVN1-205ENST00000525874 RRP1BQ14684 758 aaKnown RBP13.67□□□□□ -0.22
SYVN1-205ENST00000525874 PI16Q6UXB8 463 aa13.67□□□□□ -0.22
SYVN1-205ENST00000525874 TBC1D9Q6ZT07 1266 aa13.67□□□□□ -0.22
SYVN1-205ENST00000525874 ANKLE1Q8NAG6 615 aa13.67□□□□□ -0.22
SYVN1-205ENST00000525874 SPATA5Q8NB90 893 aa13.67□□□□□ -0.22
SYVN1-205ENST00000525874 NEUROD6Q96NK8 337 aa13.67□□□□□ -0.22
SYVN1-205ENST00000525874 ASCC2Q9H1I8 757 aaPredicted RBP13.67□□□□□ -0.22
SYVN1-205ENST00000525874 GJD2Q9UKL4 321 aa13.67□□□□□ -0.22
SYVN1-205ENST00000525874 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.67□□□□□ -0.22
SYVN1-205ENST00000525874 USP17L5A8MUK1 530 aa13.66□□□□□ -0.22
SYVN1-205ENST00000525874 CENPBP07199 599 aaPredicted RBP13.66□□□□□ -0.22
SYVN1-205ENST00000525874 MTX1Q13505 466 aa13.66□□□□□ -0.22
SYVN1-205ENST00000525874 SH3D19Q5HYK7 790 aa13.66□□□□□ -0.22
SYVN1-205ENST00000525874 LRCH3Q96II8 777 aa13.66□□□□□ -0.22
SYVN1-205ENST00000525874 RAI14Q9P0K7 980 aa13.66□□□□□ -0.22
SYVN1-205ENST00000525874 PLXNB2O15031 1838 aa13.66□□□□□ -0.22
SYVN1-205ENST00000525874 RPTORQ8N122 1335 aa13.65□□□□□ -0.22
SYVN1-205ENST00000525874 GNAI3P08754 354 aa13.65□□□□□ -0.22
SYVN1-205ENST00000525874 ARID4AP29374 1257 aaPredicted RBP13.65□□□□□ -0.22
SYVN1-205ENST00000525874 TRIM32Q13049 653 aa13.65□□□□□ -0.22
SYVN1-205ENST00000525874 GORABQ5T7V8 394 aa13.65□□□□□ -0.22
SYVN1-205ENST00000525874 C7orf61Q8IZ16 206 aa13.65□□□□□ -0.22
SYVN1-205ENST00000525874 SLC17A8Q8NDX2 589 aa13.65□□□□□ -0.22
SYVN1-205ENST00000525874 GDF15Q99988 308 aa13.65□□□□□ -0.22
SYVN1-205ENST00000525874 AS3MTQ9HBK9 375 aa13.65□□□□□ -0.22
SYVN1-205ENST00000525874 HMX1Q9NP08 348 aaPredicted RBP13.65□□□□□ -0.22
SYVN1-205ENST00000525874 HERC5Q9UII4 1024 aaKnown RBP13.65□□□□□ -0.22
SYVN1-205ENST00000525874 DDX60LQ5H9U9 1706 aaKnown RBP13.64□□□□□ -0.23
SYVN1-205ENST00000525874 SIPA1L1O43166 1804 aa13.64□□□□□ -0.23
SYVN1-205ENST00000525874 BMP8BP34820 402 aa13.64□□□□□ -0.23
SYVN1-205ENST00000525874 TEX11Q8IYF3 940 aa13.64□□□□□ -0.23
SYVN1-205ENST00000525874 NBPF3Q9H094 633 aa13.64□□□□□ -0.23
SYVN1-205ENST00000525874 MORF4L1Q9UBU8 362 aa13.64□□□□□ -0.23
SYVN1-205ENST00000525874 ZMYND8Q9ULU4 1186 aaPredicted RBP13.64□□□□□ -0.23
SYVN1-205ENST00000525874 COL6A3P12111 3177 aa13.64□□□□□ -0.23
SYVN1-205ENST00000525874 CCER2I3L3R5 266 aa13.63□□□□□ -0.23
SYVN1-205ENST00000525874 MCAMP43121 646 aa13.63□□□□□ -0.23
SYVN1-205ENST00000525874 MNX1P50219 401 aaPredicted RBP13.63□□□□□ -0.23
SYVN1-205ENST00000525874 IRX3P78415 501 aaPredicted RBP13.63□□□□□ -0.23
SYVN1-205ENST00000525874 MTMR2Q13614 643 aa13.63□□□□□ -0.23
SYVN1-205ENST00000525874 SH3RF3Q8TEJ3 882 aaPredicted RBP13.63□□□□□ -0.23
SYVN1-205ENST00000525874 TRIB2Q92519 343 aa13.63□□□□□ -0.23
SYVN1-205ENST00000525874 ARHGAP45Q92619 1136 aa13.63□□□□□ -0.23
SYVN1-205ENST00000525874 WDR18Q9BV38 432 aa13.63□□□□□ -0.23
SYVN1-205ENST00000525874 LRP2BPQ9P2M1 347 aa13.63□□□□□ -0.23
SYVN1-205ENST00000525874 PI4KBQ9UBF8 816 aa13.63□□□□□ -0.23
SYVN1-205ENST00000525874 CDK5RAP2Q96SN8 1893 aa13.62□□□□□ -0.23
SYVN1-205ENST00000525874 DLL1O00548 723 aa13.62□□□□□ -0.23
SYVN1-205ENST00000525874 CYP2B6P20813 491 aa13.62□□□□□ -0.23
SYVN1-205ENST00000525874 HOXA7P31268 230 aaPredicted RBP13.62□□□□□ -0.23
SYVN1-205ENST00000525874 RARSP54136 660 aaKnown RBP13.62□□□□□ -0.23
SYVN1-205ENST00000525874 BACE1P56817 501 aa13.62□□□□□ -0.23
SYVN1-205ENST00000525874 P2RX7Q99572 595 aaKnown RBP13.62□□□□□ -0.23
SYVN1-205ENST00000525874 NOL10Q9BSC4 688 aaKnown RBP13.62□□□□□ -0.23
SYVN1-205ENST00000525874 DHX36Q9H2U1 1008 aaKnown RBP13.62□□□□□ -0.23
SYVN1-205ENST00000525874 C11orf49Q9H6J7 331 aa13.62□□□□□ -0.23
SYVN1-205ENST00000525874 TMOD4Q9NZQ9 345 aa13.62□□□□□ -0.23
SYVN1-205ENST00000525874 OGDHLQ9ULD0 1010 aa13.62□□□□□ -0.23
SYVN1-205ENST00000525874 MAST2Q6P0Q8 1798 aa13.61□□□□□ -0.23
SYVN1-205ENST00000525874 PEX10O60683 326 aa13.61□□□□□ -0.23
SYVN1-205ENST00000525874 BAG3O95817 575 aa13.61□□□□□ -0.23
SYVN1-205ENST00000525874 ASNSP08243 561 aa13.61□□□□□ -0.23
SYVN1-205ENST00000525874 UQCRFS1P1P0C7P4 283 aa13.61□□□□□ -0.23
SYVN1-205ENST00000525874 PRKAR2AP13861 404 aaKnown RBP13.61□□□□□ -0.23
SYVN1-205ENST00000525874 JAG1P78504 1218 aa13.61□□□□□ -0.23
SYVN1-205ENST00000525874 G3BP1Q13283 466 aaKnown RBP eCLIP13.61□□□□□ -0.23
SYVN1-205ENST00000525874 MAP3K21Q5TCX8 1036 aa13.61□□□□□ -0.23
SYVN1-205ENST00000525874 GPRC5AQ8NFJ5 357 aa13.61□□□□□ -0.23
SYVN1-205ENST00000525874 NUDT12Q9BQG2 462 aa13.61□□□□□ -0.23
SYVN1-205ENST00000525874 DNAJC18Q9H819 358 aa13.61□□□□□ -0.23
SYVN1-205ENST00000525874 TXNRD2Q9NNW7 524 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms