RNA–Protein interactions for RNA: ENST00000524775.1

CSTF3-205, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 4

Gene CSTF3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-205ENST00000524775 ZNF277Q9NRM2 450 aaPredicted RBP13.82□□□□□ -0.2
CSTF3-205ENST00000524775 PCDHAC2Q9Y5I4 1007 aa13.82□□□□□ -0.2
CSTF3-205ENST00000524775 FLT1P17948 1338 aa13.82□□□□□ -0.2
CSTF3-205ENST00000524775 WDR33Q9C0J8 1336 aaKnown RBP13.82□□□□□ -0.2
CSTF3-205ENST00000524775 IFIT3O14879 490 aaKnown RBP13.81□□□□□ -0.2
CSTF3-205ENST00000524775 VIL1P09327 827 aaKnown RBP13.81□□□□□ -0.2
CSTF3-205ENST00000524775 ZSCAN22P10073 491 aaPredicted RBP13.81□□□□□ -0.2
CSTF3-205ENST00000524775 FDPSP14324 419 aaKnown RBP13.81□□□□□ -0.2
CSTF3-205ENST00000524775 ESR2Q92731 530 aa13.81□□□□□ -0.2
CSTF3-205ENST00000524775 DYNLL2Q96FJ2 89 aa13.81□□□□□ -0.2
CSTF3-205ENST00000524775 CHAMP1Q96JM3 812 aa13.81□□□□□ -0.2
CSTF3-205ENST00000524775 ZKSCAN3Q9BRR0 538 aa13.81□□□□□ -0.2
CSTF3-205ENST00000524775 DDX4Q9NQI0 724 aaKnown RBP13.81□□□□□ -0.2
CSTF3-205ENST00000524775 NFKBIEO00221 500 aa13.8□□□□□ -0.2
CSTF3-205ENST00000524775 PRDM1O75626 825 aa13.8□□□□□ -0.2
CSTF3-205ENST00000524775 NTRK3Q16288 839 aa13.8□□□□□ -0.2
CSTF3-205ENST00000524775 ENAHQ8N8S7 591 aaPredicted RBP13.8□□□□□ -0.2
CSTF3-205ENST00000524775 TEKT1Q969V4 418 aa13.8□□□□□ -0.2
CSTF3-205ENST00000524775 USP40Q9NVE5 1235 aa13.8□□□□□ -0.2
CSTF3-205ENST00000524775 SAP30BPQ9UHR5 308 aaKnown RBP13.8□□□□□ -0.2
CSTF3-205ENST00000524775 BAZ2BQ9UIF8 2168 aaKnown RBP13.8□□□□□ -0.2
CSTF3-205ENST00000524775 PTPDC1A2A3K4 754 aa13.79□□□□□ -0.2
CSTF3-205ENST00000524775 GOLGA8BA8MQT2 603 aa13.79□□□□□ -0.2
CSTF3-205ENST00000524775 CDC27P30260 824 aa13.79□□□□□ -0.2
CSTF3-205ENST00000524775 IARSP41252 1262 aaKnown RBP13.79□□□□□ -0.2
CSTF3-205ENST00000524775 NT5C2P49902 561 aa13.79□□□□□ -0.2
CSTF3-205ENST00000524775 PRELPP51888 382 aa13.79□□□□□ -0.2
CSTF3-205ENST00000524775 WTAPQ15007 396 aa13.79□□□□□ -0.2
CSTF3-205ENST00000524775 FOXD4L5Q5VV16 416 aaPredicted RBP13.79□□□□□ -0.2
CSTF3-205ENST00000524775 RCSD1Q6JBY9 416 aa13.79□□□□□ -0.2
CSTF3-205ENST00000524775 C16orf86Q6ZW13 317 aa13.79□□□□□ -0.2
CSTF3-205ENST00000524775 RAB11FIP4Q86YS3 637 aa13.79□□□□□ -0.2
CSTF3-205ENST00000524775 KIAA0825Q8IV33 1275 aa13.79□□□□□ -0.2
CSTF3-205ENST00000524775 LARGE2Q8N3Y3 721 aa13.79□□□□□ -0.2
CSTF3-205ENST00000524775 FOXD4L4Q8WXT5 416 aaPredicted RBP13.79□□□□□ -0.2
CSTF3-205ENST00000524775 ANKS1AQ92625 1134 aa13.79□□□□□ -0.2
CSTF3-205ENST00000524775 GBP4Q96PP9 640 aa13.79□□□□□ -0.2
CSTF3-205ENST00000524775 ZSCAN10Q96SZ4 725 aaPredicted RBP13.79□□□□□ -0.2
CSTF3-205ENST00000524775 SERPINA10Q9UK55 444 aa13.79□□□□□ -0.2
CSTF3-205ENST00000524775 MYH4Q9Y623 1939 aa13.79□□□□□ -0.2
CSTF3-205ENST00000524775 LTBP3Q9NS15 1303 aa13.79□□□□□ -0.2
CSTF3-205ENST00000524775 PSMD14O00487 310 aa13.78□□□□□ -0.2
CSTF3-205ENST00000524775 ZBTB43O43298 467 aa13.78□□□□□ -0.2
CSTF3-205ENST00000524775 F13A1P00488 732 aa13.78□□□□□ -0.2
CSTF3-205ENST00000524775 SLC3A2P08195 630 aaKnown RBP13.78□□□□□ -0.2
CSTF3-205ENST00000524775 RASA1P20936 1047 aa13.78□□□□□ -0.2
CSTF3-205ENST00000524775 ADD1P35611 737 aaKnown RBP13.78□□□□□ -0.2
CSTF3-205ENST00000524775 RCAN1P53805 252 aa13.78□□□□□ -0.2
CSTF3-205ENST00000524775 GABPAQ06546 454 aa13.78□□□□□ -0.2
CSTF3-205ENST00000524775 PDE4BQ07343 736 aa13.78□□□□□ -0.2
CSTF3-205ENST00000524775 LARP1BQ659C4 914 aaKnown RBP13.78□□□□□ -0.2
CSTF3-205ENST00000524775 RSBN1LQ6PCB5 846 aaPredicted RBP13.78□□□□□ -0.2
CSTF3-205ENST00000524775 TMTC2Q8N394 836 aa13.78□□□□□ -0.2
CSTF3-205ENST00000524775 SLC44A5Q8NCS7 719 aa13.78□□□□□ -0.2
CSTF3-205ENST00000524775 NLGN2Q8NFZ4 835 aa13.78□□□□□ -0.2
CSTF3-205ENST00000524775 CHMP4CQ96CF2 233 aa13.78□□□□□ -0.2
CSTF3-205ENST00000524775 DDX11Q96FC9 970 aa13.78□□□□□ -0.2
CSTF3-205ENST00000524775 IL17RBQ9NRM6 502 aa13.78□□□□□ -0.2
CSTF3-205ENST00000524775 TOMM22Q9NS69 142 aa13.78□□□□□ -0.2
CSTF3-205ENST00000524775 ZNRF3Q9ULT6 936 aa13.78□□□□□ -0.2
CSTF3-205ENST00000524775 TNKSO95271 1327 aa13.78□□□□□ -0.2
CSTF3-205ENST00000524775 RANBP6O60518 1105 aaKnown RBP13.77□□□□□ -0.21
CSTF3-205ENST00000524775 NMT2O60551 498 aa13.77□□□□□ -0.21
CSTF3-205ENST00000524775 NPM3O75607 178 aaKnown RBP13.77□□□□□ -0.21
CSTF3-205ENST00000524775 POLR3DP05423 398 aaPredicted RBP13.77□□□□□ -0.21
CSTF3-205ENST00000524775 PDIA4P13667 645 aaKnown RBP13.77□□□□□ -0.21
CSTF3-205ENST00000524775 PDCP20941 246 aa13.77□□□□□ -0.21
CSTF3-205ENST00000524775 CDK8P49336 464 aa13.77□□□□□ -0.21
CSTF3-205ENST00000524775 HMGN5P82970 282 aaKnown RBP13.77□□□□□ -0.21
CSTF3-205ENST00000524775 NFIAQ12857 509 aa13.77□□□□□ -0.21
CSTF3-205ENST00000524775 SLC4A8Q2Y0W8 1093 aa13.77□□□□□ -0.21
CSTF3-205ENST00000524775 FAM47AQ5JRC9 791 aa13.77□□□□□ -0.21
CSTF3-205ENST00000524775 CDC37L1Q7L3B6 337 aa13.77□□□□□ -0.21
CSTF3-205ENST00000524775 ZFPM1Q8IX07 1006 aa13.77□□□□□ -0.21
CSTF3-205ENST00000524775 MYL10Q9BUA6 226 aa13.77□□□□□ -0.21
CSTF3-205ENST00000524775 IDI2Q9BXS1 227 aa13.77□□□□□ -0.21
CSTF3-205ENST00000524775 TCP11L1Q9NUJ3 509 aa13.77□□□□□ -0.21
CSTF3-205ENST00000524775 LMBRD1Q9NUN5 540 aa13.77□□□□□ -0.21
CSTF3-205ENST00000524775 FAM198AQ9UFP1 575 aa13.77□□□□□ -0.21
CSTF3-205ENST00000524775 RAD17O75943 681 aa13.76□□□□□ -0.21
CSTF3-205ENST00000524775 RXRAP19793 462 aa13.76□□□□□ -0.21
CSTF3-205ENST00000524775 NOVP48745 357 aa13.76□□□□□ -0.21
CSTF3-205ENST00000524775 METAP2P50579 478 aaKnown RBP eCLIP13.76□□□□□ -0.21
CSTF3-205ENST00000524775 CXCL9Q07325 125 aa13.76□□□□□ -0.21
CSTF3-205ENST00000524775 SART3Q15020 963 aaKnown RBP13.76□□□□□ -0.21
CSTF3-205ENST00000524775 ZNF654Q8IZM8 581 aa13.76□□□□□ -0.21
CSTF3-205ENST00000524775 UBAC1Q9BSL1 405 aa13.76□□□□□ -0.21
CSTF3-205ENST00000524775 OSBPL5Q9H0X9 879 aaPredicted RBP13.76□□□□□ -0.21
CSTF3-205ENST00000524775 NAP1L2Q9ULW6 460 aaPredicted RBP13.76□□□□□ -0.21
CSTF3-205ENST00000524775 SLC12A7Q9Y666 1083 aa13.76□□□□□ -0.21
CSTF3-205ENST00000524775 MYO3BQ8WXR4 1341 aa13.75□□□□□ -0.21
CSTF3-205ENST00000524775 CCDC69A6NI79 296 aa13.75□□□□□ -0.21
CSTF3-205ENST00000524775 GOLGA8AA7E2F4 631 aa13.75□□□□□ -0.21
CSTF3-205ENST00000524775 DDX11L8A8MPP1 907 aa13.75□□□□□ -0.21
CSTF3-205ENST00000524775 DHX16O60231 1041 aaKnown RBP13.75□□□□□ -0.21
CSTF3-205ENST00000524775 TFAP4Q01664 338 aa13.75□□□□□ -0.21
CSTF3-205ENST00000524775 FUT2Q10981 343 aa13.75□□□□□ -0.21
CSTF3-205ENST00000524775 TROAPQ12815 778 aa13.75□□□□□ -0.21
CSTF3-205ENST00000524775 RESTQ13127 1097 aa13.75□□□□□ -0.21
CSTF3-205ENST00000524775 CFAP100Q494V2 611 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms