RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 ZNF384Q8TF68 577 aa11.63□□□□□ -0.55
VPS13B-212ENST00000524330 TGFBRAP1Q8WUH2 860 aa11.63□□□□□ -0.55
VPS13B-212ENST00000524330 C8orf76Q96K31 380 aa11.63□□□□□ -0.55
VPS13B-212ENST00000524330 LMBRD1Q9NUN5 540 aa11.63□□□□□ -0.55
VPS13B-212ENST00000524330 RBM27Q9P2N5 1060 aaKnown RBP11.63□□□□□ -0.55
VPS13B-212ENST00000524330 TTF2Q9UNY4 1162 aaKnown RBP11.63□□□□□ -0.55
VPS13B-212ENST00000524330 LAMB1P07942 1786 aa11.63□□□□□ -0.55
VPS13B-212ENST00000524330 NID2Q14112 1375 aa11.63□□□□□ -0.55
VPS13B-212ENST00000524330 TNKSO95271 1327 aa11.62□□□□□ -0.55
VPS13B-212ENST00000524330 JAK2O60674 1132 aa11.62□□□□□ -0.55
VPS13B-212ENST00000524330 LETM1O95202 739 aaPredicted RBP11.62□□□□□ -0.55
VPS13B-212ENST00000524330 HLA-DOAP06340 250 aa11.62□□□□□ -0.55
VPS13B-212ENST00000524330 CHRNA5P30532 468 aa11.62□□□□□ -0.55
VPS13B-212ENST00000524330 KIF5BP33176 963 aa11.62□□□□□ -0.55
VPS13B-212ENST00000524330 GNAQP50148 359 aa11.62□□□□□ -0.55
VPS13B-212ENST00000524330 UBE2HP62256 183 aa11.62□□□□□ -0.55
VPS13B-212ENST00000524330 KIAA2012Q0VF49 1180 aa11.62□□□□□ -0.55
VPS13B-212ENST00000524330 GNL2Q13823 731 aaKnown RBP11.62□□□□□ -0.55
VPS13B-212ENST00000524330 SAFBQ15424 915 aaKnown RBP eCLIP11.62□□□□□ -0.55
VPS13B-212ENST00000524330 DIXDC1Q155Q3 683 aa11.62□□□□□ -0.55
VPS13B-212ENST00000524330 MICU3Q86XE3 530 aa11.62□□□□□ -0.55
VPS13B-212ENST00000524330 ZNF654Q8IZM8 581 aa11.62□□□□□ -0.55
VPS13B-212ENST00000524330 PSMD1Q99460 953 aa11.62□□□□□ -0.55
VPS13B-212ENST00000524330 MTFR1LQ9H019 292 aa11.62□□□□□ -0.55
VPS13B-212ENST00000524330 BRPF3Q9ULD4 1205 aa11.62□□□□□ -0.55
VPS13B-212ENST00000524330 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.62□□□□□ -0.55
VPS13B-212ENST00000524330 ROBO3Q96MS0 1386 aa11.62□□□□□ -0.55
VPS13B-212ENST00000524330 PPIP5K2O43314 1243 aa11.61□□□□□ -0.55
VPS13B-212ENST00000524330 ECE2O60344 883 aa11.61□□□□□ -0.55
VPS13B-212ENST00000524330 TSPY3P0CV98 308 aa11.61□□□□□ -0.55
VPS13B-212ENST00000524330 TSPY8P0CW00 308 aa11.61□□□□□ -0.55
VPS13B-212ENST00000524330 BRAPQ7Z569 592 aa11.61□□□□□ -0.55
VPS13B-212ENST00000524330 DGKHQ86XP1 1220 aa11.61□□□□□ -0.55
VPS13B-212ENST00000524330 CTCFLQ8NI51 663 aaPredicted RBP11.61□□□□□ -0.55
VPS13B-212ENST00000524330 NCOA5Q9HCD5 579 aaKnown RBP11.61□□□□□ -0.55
VPS13B-212ENST00000524330 PIM2Q9P1W9 311 aa11.61□□□□□ -0.55
VPS13B-212ENST00000524330 SWAP70Q9UH65 585 aa11.61□□□□□ -0.55
VPS13B-212ENST00000524330 HDAC9Q9UKV0 1011 aa11.61□□□□□ -0.55
VPS13B-212ENST00000524330 HPS5Q9UPZ3 1129 aa11.61□□□□□ -0.55
VPS13B-212ENST00000524330 NAV1Q8NEY1 1877 aa11.61□□□□□ -0.55
VPS13B-212ENST00000524330 ELP1O95163 1332 aa11.6□□□□□ -0.55
VPS13B-212ENST00000524330 GOLGA6L3A6NEY3 463 aa11.6□□□□□ -0.55
VPS13B-212ENST00000524330 DEXIO95424 95 aa11.6□□□□□ -0.55
VPS13B-212ENST00000524330 CTDNEP1O95476 244 aa11.6□□□□□ -0.55
VPS13B-212ENST00000524330 USP17L8P0C7I0 530 aa11.6□□□□□ -0.55
VPS13B-212ENST00000524330 IFNAR1P17181 557 aa11.6□□□□□ -0.55
VPS13B-212ENST00000524330 DEKP35659 375 aaKnown RBP11.6□□□□□ -0.55
VPS13B-212ENST00000524330 MMP14P50281 582 aa11.6□□□□□ -0.55
VPS13B-212ENST00000524330 CDC37L1Q7L3B6 337 aa11.6□□□□□ -0.55
VPS13B-212ENST00000524330 USP48Q86UV5 1035 aa11.6□□□□□ -0.55
VPS13B-212ENST00000524330 MAPKAPK5Q8IW41 473 aa11.6□□□□□ -0.55
VPS13B-212ENST00000524330 STK11IPQ8N1F8 1099 aa11.6□□□□□ -0.55
VPS13B-212ENST00000524330 FANCBQ8NB91 859 aa11.6□□□□□ -0.55
VPS13B-212ENST00000524330 NUP133Q8WUM0 1156 aa11.6□□□□□ -0.55
VPS13B-212ENST00000524330 KAT14Q9H8E8 782 aa11.6□□□□□ -0.55
VPS13B-212ENST00000524330 DBNDD1Q9H9R9 158 aa11.6□□□□□ -0.55
VPS13B-212ENST00000524330 TCP11L1Q9NUJ3 509 aa11.6□□□□□ -0.55
VPS13B-212ENST00000524330 USP40Q9NVE5 1235 aa11.6□□□□□ -0.55
VPS13B-212ENST00000524330 TMOD2Q9NZR1 351 aa11.6□□□□□ -0.55
VPS13B-212ENST00000524330 ZNF219Q9P2Y4 722 aaPredicted RBP11.6□□□□□ -0.55
VPS13B-212ENST00000524330 DAGLAQ9Y4D2 1042 aa11.6□□□□□ -0.55
VPS13B-212ENST00000524330 BAZ2AQ9UIF9 1905 aaKnown RBP11.59□□□□□ -0.55
VPS13B-212ENST00000524330 F8W031 263 aaPredicted RBP11.59□□□□□ -0.55
VPS13B-212ENST00000524330 FIBPO43427 364 aa11.59□□□□□ -0.55
VPS13B-212ENST00000524330 C21orf2O43822 256 aa11.59□□□□□ -0.55
VPS13B-212ENST00000524330 FMNL1O95466 1100 aaPredicted RBP11.59□□□□□ -0.55
VPS13B-212ENST00000524330 RBM5P52756 815 aaKnown RBP eCLIP11.59□□□□□ -0.55
VPS13B-212ENST00000524330 TFAP4Q01664 338 aa11.59□□□□□ -0.55
VPS13B-212ENST00000524330 COL9A3Q14050 684 aaPredicted RBP11.59□□□□□ -0.55
VPS13B-212ENST00000524330 SEC23AQ15436 765 aa11.59□□□□□ -0.55
VPS13B-212ENST00000524330 FOXD4L6Q3SYB3 417 aaPredicted RBP11.59□□□□□ -0.55
VPS13B-212ENST00000524330 FOXD4L3Q6VB84 417 aaPredicted RBP11.59□□□□□ -0.55
VPS13B-212ENST00000524330 FBXO18Q8NFZ0 1043 aa11.59□□□□□ -0.55
VPS13B-212ENST00000524330 C7orf43Q8WVR3 580 aa11.59□□□□□ -0.55
VPS13B-212ENST00000524330 SPATA32Q96LK8 384 aa11.59□□□□□ -0.55
VPS13B-212ENST00000524330 MAP3K14Q99558 947 aa11.59□□□□□ -0.55
VPS13B-212ENST00000524330 LZTS2Q9BRK4 669 aa11.59□□□□□ -0.55
VPS13B-212ENST00000524330 ZKSCAN3Q9BRR0 538 aa11.59□□□□□ -0.55
VPS13B-212ENST00000524330 ALG1Q9BT22 464 aa11.59□□□□□ -0.55
VPS13B-212ENST00000524330 TRIM34Q9BYJ4 488 aa11.59□□□□□ -0.55
VPS13B-212ENST00000524330 DHX36Q9H2U1 1008 aaKnown RBP11.59□□□□□ -0.55
VPS13B-212ENST00000524330 BRMS1Q9HCU9 246 aa11.59□□□□□ -0.55
VPS13B-212ENST00000524330 GPHNQ9NQX3 736 aaPredicted RBP11.59□□□□□ -0.55
VPS13B-212ENST00000524330 MKRN1Q9UHC7 482 aaKnown RBP11.59□□□□□ -0.55
VPS13B-212ENST00000524330 SERPINA10Q9UK55 444 aa11.59□□□□□ -0.55
VPS13B-212ENST00000524330 CNPY2Q9Y2B0 182 aa11.59□□□□□ -0.55
VPS13B-212ENST00000524330 DLEC1Q9Y238 1755 aa11.59□□□□□ -0.55
VPS13B-212ENST00000524330 FLT1P17948 1338 aa11.59□□□□□ -0.55
VPS13B-212ENST00000524330 SLX4Q8IY92 1834 aa11.58□□□□□ -0.56
VPS13B-212ENST00000524330 CYP2D7A0A087X1C5 515 aa11.58□□□□□ -0.56
VPS13B-212ENST00000524330 NPM3O75607 178 aaKnown RBP11.58□□□□□ -0.56
VPS13B-212ENST00000524330 DPEP1P16444 411 aa11.58□□□□□ -0.56
VPS13B-212ENST00000524330 CRKP46108 304 aa11.58□□□□□ -0.56
VPS13B-212ENST00000524330 DNM1Q05193 864 aaKnown RBP11.58□□□□□ -0.56
VPS13B-212ENST00000524330 RESTQ13127 1097 aa11.58□□□□□ -0.56
VPS13B-212ENST00000524330 DALRD3Q5D0E6 543 aaKnown RBP11.58□□□□□ -0.56
VPS13B-212ENST00000524330 C16orf86Q6ZW13 317 aa11.58□□□□□ -0.56
VPS13B-212ENST00000524330 FERMT3Q86UX7 667 aa11.58□□□□□ -0.56
VPS13B-212ENST00000524330 NIM1KQ8IY84 436 aa11.58□□□□□ -0.56
VPS13B-212ENST00000524330 LARGE2Q8N3Y3 721 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms