RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 RPS6KA5O75582 802 aa11.69□□□□□ -0.54
SPIDR-225ENST00000524141 SSRP1Q08945 709 aaKnown RBP11.69□□□□□ -0.54
SPIDR-225ENST00000524141 NTRK3Q16288 839 aa11.69□□□□□ -0.54
SPIDR-225ENST00000524141 NFXL1Q6ZNB6 911 aa11.69□□□□□ -0.54
SPIDR-225ENST00000524141 SRLQ86TD4 932 aa11.69□□□□□ -0.54
SPIDR-225ENST00000524141 CCDC51Q96ER9 411 aa11.69□□□□□ -0.54
SPIDR-225ENST00000524141 ANKZF1Q9H8Y5 726 aa11.69□□□□□ -0.54
SPIDR-225ENST00000524141 LZTFL1Q9NQ48 299 aa11.69□□□□□ -0.54
SPIDR-225ENST00000524141 TTF2Q9UNY4 1162 aaKnown RBP11.69□□□□□ -0.54
SPIDR-225ENST00000524141 CEP131Q9UPN4 1083 aa11.69□□□□□ -0.54
SPIDR-225ENST00000524141 MEGF6O75095 1541 aa11.69□□□□□ -0.54
SPIDR-225ENST00000524141 SOWAHDA6NJG2 315 aa11.69□□□□□ -0.54
SPIDR-225ENST00000524141 FOXN1O15353 648 aa11.69□□□□□ -0.54
SPIDR-225ENST00000524141 ZAP70P43403 619 aa11.69□□□□□ -0.54
SPIDR-225ENST00000524141 CABP4P57796 275 aa11.69□□□□□ -0.54
SPIDR-225ENST00000524141 PIP4K2BP78356 416 aa11.69□□□□□ -0.54
SPIDR-225ENST00000524141 MCM6Q14566 821 aa11.69□□□□□ -0.54
SPIDR-225ENST00000524141 HSP90B2PQ58FF3 399 aa11.69□□□□□ -0.54
SPIDR-225ENST00000524141 NOM1Q5C9Z4 860 aaKnown RBP11.69□□□□□ -0.54
SPIDR-225ENST00000524141 RASGRP2Q7LDG7 609 aa11.69□□□□□ -0.54
SPIDR-225ENST00000524141 CNGA4Q8IV77 575 aa11.69□□□□□ -0.54
SPIDR-225ENST00000524141 STK11IPQ8N1F8 1099 aa11.69□□□□□ -0.54
SPIDR-225ENST00000524141 GOLGA6L1Q8N7Z2 621 aa11.69□□□□□ -0.54
SPIDR-225ENST00000524141 SPATA20Q8TB22 786 aa11.69□□□□□ -0.54
SPIDR-225ENST00000524141 EFCC1Q9HA90 598 aa11.69□□□□□ -0.54
SPIDR-225ENST00000524141 PDE11AQ9HCR9 933 aa11.69□□□□□ -0.54
SPIDR-225ENST00000524141 VPS18Q9P253 973 aa11.69□□□□□ -0.54
SPIDR-225ENST00000524141 WDR17Q8IZU2 1322 aa11.69□□□□□ -0.54
SPIDR-225ENST00000524141 SEMA3EO15041 775 aa11.68□□□□□ -0.54
SPIDR-225ENST00000524141 WHAMMP3Q1A5X7 153 aa11.68□□□□□ -0.54
SPIDR-225ENST00000524141 KIF4BQ2VIQ3 1234 aa11.68□□□□□ -0.54
SPIDR-225ENST00000524141 FILIP1LQ4L180 1135 aa11.68□□□□□ -0.54
SPIDR-225ENST00000524141 CTR9Q6PD62 1173 aa11.68□□□□□ -0.54
SPIDR-225ENST00000524141 CYB5R4Q7L1T6 521 aa11.68□□□□□ -0.54
SPIDR-225ENST00000524141 TRMT44Q8IYL2 757 aaKnown RBP11.68□□□□□ -0.54
SPIDR-225ENST00000524141 IGSF22Q8N9C0 903 aa11.68□□□□□ -0.54
SPIDR-225ENST00000524141 PUS3Q9BZE2 481 aaKnown RBP11.68□□□□□ -0.54
SPIDR-225ENST00000524141 NBPF3Q9H094 633 aa11.68□□□□□ -0.54
SPIDR-225ENST00000524141 FOXP1Q9H334 677 aaPredicted RBP11.68□□□□□ -0.54
SPIDR-225ENST00000524141 ZSWIM4Q9H7M6 989 aa11.68□□□□□ -0.54
SPIDR-225ENST00000524141 MYO1AQ9UBC5 1043 aa11.68□□□□□ -0.54
SPIDR-225ENST00000524141 SERTAD1Q9UHV2 236 aa11.68□□□□□ -0.54
SPIDR-225ENST00000524141 FBXO2Q9UK22 296 aaPredicted RBP11.68□□□□□ -0.54
SPIDR-225ENST00000524141 L1RE1Q9UN81 338 aa11.68□□□□□ -0.54
SPIDR-225ENST00000524141 TBC1D2BQ9UPU7 963 aa11.68□□□□□ -0.54
SPIDR-225ENST00000524141 MST1RQ04912 1400 aa11.68□□□□□ -0.54
SPIDR-225ENST00000524141 PKD1L3Q7Z443 1732 aa11.68□□□□□ -0.54
SPIDR-225ENST00000524141 RANBP6O60518 1105 aaKnown RBP11.68□□□□□ -0.54
SPIDR-225ENST00000524141 FMNL1O95466 1100 aaPredicted RBP11.68□□□□□ -0.54
SPIDR-225ENST00000524141 MMP1P03956 469 aa11.68□□□□□ -0.54
SPIDR-225ENST00000524141 ADORA1P30542 326 aa11.68□□□□□ -0.54
SPIDR-225ENST00000524141 LIFRP42702 1097 aa11.68□□□□□ -0.54
SPIDR-225ENST00000524141 MTF1Q14872 753 aa11.68□□□□□ -0.54
SPIDR-225ENST00000524141 TTF1Q15361 905 aaPredicted RBP11.68□□□□□ -0.54
SPIDR-225ENST00000524141 SPATA1Q5VX52 437 aa11.68□□□□□ -0.54
SPIDR-225ENST00000524141 TBC1D10CQ8IV04 446 aa11.68□□□□□ -0.54
SPIDR-225ENST00000524141 TEX13AQ9BXU3 409 aaPredicted RBP11.68□□□□□ -0.54
SPIDR-225ENST00000524141 SAMSN1Q9NSI8 373 aaKnown RBP11.68□□□□□ -0.54
SPIDR-225ENST00000524141 RRP15Q9Y3B9 282 aaKnown RBP11.68□□□□□ -0.54
SPIDR-225ENST00000524141 RXRAP19793 462 aa11.67□□□□□ -0.54
SPIDR-225ENST00000524141 GYS2P54840 703 aa11.67□□□□□ -0.54
SPIDR-225ENST00000524141 FAM71BQ8TC56 605 aa11.67□□□□□ -0.54
SPIDR-225ENST00000524141 SLC26A6Q9BXS9 759 aa11.67□□□□□ -0.54
SPIDR-225ENST00000524141 PUF60Q9UHX1 559 aaKnown RBP11.67□□□□□ -0.54
SPIDR-225ENST00000524141 NID2Q14112 1375 aa11.67□□□□□ -0.54
SPIDR-225ENST00000524141 CTAGE15A4D2H0 777 aa11.67□□□□□ -0.54
SPIDR-225ENST00000524141 NBPF26B4DH59 902 aa11.67□□□□□ -0.54
SPIDR-225ENST00000524141 B4E1Z4 1266 aa11.67□□□□□ -0.54
SPIDR-225ENST00000524141 MFAP3LO75121 409 aa11.67□□□□□ -0.54
SPIDR-225ENST00000524141 PRR29P0C7W0 189 aa11.67□□□□□ -0.54
SPIDR-225ENST00000524141 CTAGE8P0CG41 777 aa11.67□□□□□ -0.54
SPIDR-225ENST00000524141 IFNAR1P17181 557 aa11.67□□□□□ -0.54
SPIDR-225ENST00000524141 ADD2P35612 726 aa11.67□□□□□ -0.54
SPIDR-225ENST00000524141 SCARF1Q14162 830 aa11.67□□□□□ -0.54
SPIDR-225ENST00000524141 HSP90AB3PQ58FF7 597 aa11.67□□□□□ -0.54
SPIDR-225ENST00000524141 TMEM67Q5HYA8 995 aa11.67□□□□□ -0.54
SPIDR-225ENST00000524141 ZNF569Q5MCW4 686 aa11.67□□□□□ -0.54
SPIDR-225ENST00000524141 NBPF14Q5TI25 921 aa11.67□□□□□ -0.54
SPIDR-225ENST00000524141 NBPF10Q6P3W6 841 aaKnown RBP11.67□□□□□ -0.54
SPIDR-225ENST00000524141 RAD9BQ6WBX8 426 aa11.67□□□□□ -0.54
SPIDR-225ENST00000524141 CTAGE6Q86UF2 777 aa11.67□□□□□ -0.54
SPIDR-225ENST00000524141 CTAGE4Q8IX94 777 aa11.67□□□□□ -0.54
SPIDR-225ENST00000524141 C10orf67Q8IYJ2 551 aa11.67□□□□□ -0.54
SPIDR-225ENST00000524141 TRIM22Q8IYM9 498 aa11.67□□□□□ -0.54
SPIDR-225ENST00000524141 NBPF15Q8N660 670 aa11.67□□□□□ -0.54
SPIDR-225ENST00000524141 IGDCC4Q8TDY8 1250 aa11.67□□□□□ -0.54
SPIDR-225ENST00000524141 IRX2Q9BZI1 471 aaPredicted RBP11.67□□□□□ -0.54
SPIDR-225ENST00000524141 LY9Q9HBG7 655 aa11.67□□□□□ -0.54
SPIDR-225ENST00000524141 MED4Q9NPJ6 270 aa11.67□□□□□ -0.54
SPIDR-225ENST00000524141 MKRN1Q9UHC7 482 aaKnown RBP11.67□□□□□ -0.54
SPIDR-225ENST00000524141 SRPRBQ9Y5M8 271 aaKnown RBP11.67□□□□□ -0.54
SPIDR-225ENST00000524141 SLC12A7Q9Y666 1083 aa11.67□□□□□ -0.54
SPIDR-225ENST00000524141 ITIH6Q6UXX5 1313 aa11.67□□□□□ -0.54
SPIDR-225ENST00000524141 SYNRGQ9UMZ2 1314 aa11.67□□□□□ -0.54
SPIDR-225ENST00000524141 ACTN4O43707 911 aaKnown RBP11.67□□□□□ -0.54
SPIDR-225ENST00000524141 FECHP22830 423 aa11.67□□□□□ -0.54
SPIDR-225ENST00000524141 RBL2Q08999 1139 aa11.67□□□□□ -0.54
SPIDR-225ENST00000524141 ZNF827Q17R98 1081 aa11.67□□□□□ -0.54
SPIDR-225ENST00000524141 SPECC1Q5M775 1068 aa11.67□□□□□ -0.54
SPIDR-225ENST00000524141 SLC9C2Q5TAH2 1124 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms