RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 TUBA1BP68363 451 aa7.44□□□□□ -1.22
SDC2-208ENST00000523877 MDM2Q00987 491 aaPredicted RBP7.44□□□□□ -1.22
SDC2-208ENST00000523877 TAGLNQ01995 201 aaKnown RBP7.44□□□□□ -1.22
SDC2-208ENST00000523877 PDE3BQ13370 1112 aa7.44□□□□□ -1.22
SDC2-208ENST00000523877 NOLC1Q14978 699 aaKnown RBP eCLIP7.44□□□□□ -1.22
SDC2-208ENST00000523877 IQCB1Q15051 598 aa7.44□□□□□ -1.22
SDC2-208ENST00000523877 TERF2Q15554 542 aa7.44□□□□□ -1.22
SDC2-208ENST00000523877 BRDTQ58F21 947 aaPredicted RBP7.44□□□□□ -1.22
SDC2-208ENST00000523877 SH2D4BQ5SQS7 431 aa7.44□□□□□ -1.22
SDC2-208ENST00000523877 CFAP70Q5T0N1 1121 aa7.44□□□□□ -1.22
SDC2-208ENST00000523877 CDCA2Q69YH5 1023 aaPredicted RBP7.44□□□□□ -1.22
SDC2-208ENST00000523877 PPP4R3AQ6IN85 833 aa7.44□□□□□ -1.22
SDC2-208ENST00000523877 TUBA1AQ71U36 451 aa7.44□□□□□ -1.22
SDC2-208ENST00000523877 LILRB2Q8N423 598 aa7.44□□□□□ -1.22
SDC2-208ENST00000523877 GIMAP7Q8NHV1 300 aa7.44□□□□□ -1.22
SDC2-208ENST00000523877 AFAP1L1Q8TED9 768 aa7.44□□□□□ -1.22
SDC2-208ENST00000523877 NELL1Q92832 810 aa7.44□□□□□ -1.22
SDC2-208ENST00000523877 MIEF2Q96C03 454 aa7.44□□□□□ -1.22
SDC2-208ENST00000523877 RBM17Q96I25 401 aaKnown RBP7.44□□□□□ -1.22
SDC2-208ENST00000523877 TMX1Q9H3N1 280 aa7.44□□□□□ -1.22
SDC2-208ENST00000523877 DDX21Q9NR30 783 aaKnown RBP eCLIP7.44□□□□□ -1.22
SDC2-208ENST00000523877 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.44□□□□□ -1.22
SDC2-208ENST00000523877 AIPL1Q9NZN9 384 aa7.44□□□□□ -1.22
SDC2-208ENST00000523877 TRAF3IP3Q9Y228 551 aa7.44□□□□□ -1.22
SDC2-208ENST00000523877 SSX2IPQ9Y2D8 614 aa7.44□□□□□ -1.22
SDC2-208ENST00000523877 MRPL11Q9Y3B7 192 aaKnown RBP7.44□□□□□ -1.22
SDC2-208ENST00000523877 TRIM17Q9Y577 477 aa7.44□□□□□ -1.22
SDC2-208ENST00000523877 H7C1W4 665 aa7.43□□□□□ -1.22
SDC2-208ENST00000523877 ENPP3O14638 875 aa7.43□□□□□ -1.22
SDC2-208ENST00000523877 CASQ2O14958 399 aaPredicted RBP7.43□□□□□ -1.22
SDC2-208ENST00000523877 KPNA6O60684 536 aa7.43□□□□□ -1.22
SDC2-208ENST00000523877 DIAPH2O60879 1101 aa7.43□□□□□ -1.22
SDC2-208ENST00000523877 XRCC5P13010 732 aaKnown RBP7.43□□□□□ -1.22
SDC2-208ENST00000523877 RAC2P15153 192 aa7.43□□□□□ -1.22
SDC2-208ENST00000523877 GRK2P25098 689 aa7.43□□□□□ -1.22
SDC2-208ENST00000523877 ADD2P35612 726 aa7.43□□□□□ -1.22
SDC2-208ENST00000523877 MAP3K9P80192 1104 aa7.43□□□□□ -1.22
SDC2-208ENST00000523877 GNL2Q13823 731 aaKnown RBP7.43□□□□□ -1.22
SDC2-208ENST00000523877 HLTFQ14527 1009 aaKnown RBP eCLIP7.43□□□□□ -1.22
SDC2-208ENST00000523877 ACAP1Q15027 740 aa7.43□□□□□ -1.22
SDC2-208ENST00000523877 MEX3CQ5U5Q3 659 aaKnown RBP7.43□□□□□ -1.22
SDC2-208ENST00000523877 BTN2A1Q7KYR7 527 aa7.43□□□□□ -1.22
SDC2-208ENST00000523877 RNF168Q8IYW5 571 aaPredicted RBP7.43□□□□□ -1.22
SDC2-208ENST00000523877 IFNL2Q8IZJ0 200 aa7.43□□□□□ -1.22
SDC2-208ENST00000523877 OR8H2Q8N162 312 aa7.43□□□□□ -1.22
SDC2-208ENST00000523877 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.43□□□□□ -1.22
SDC2-208ENST00000523877 RSAD2Q8WXG1 361 aa7.43□□□□□ -1.22
SDC2-208ENST00000523877 ZNF594Q96JF6 807 aaPredicted RBP7.43□□□□□ -1.22
SDC2-208ENST00000523877 NLRP3Q96P20 1036 aa7.43□□□□□ -1.22
SDC2-208ENST00000523877 SLKQ9H2G2 1235 aaPredicted RBP7.43□□□□□ -1.22
SDC2-208ENST00000523877 CCSER2Q9H7U1 834 aa7.43□□□□□ -1.22
SDC2-208ENST00000523877 DBNDD1Q9H9R9 158 aa7.43□□□□□ -1.22
SDC2-208ENST00000523877 PLEKHA5Q9HAU0 1116 aa7.43□□□□□ -1.22
SDC2-208ENST00000523877 BCL2L12Q9HB09 334 aa7.43□□□□□ -1.22
SDC2-208ENST00000523877 CYP4F11Q9HBI6 524 aa7.43□□□□□ -1.22
SDC2-208ENST00000523877 PTPRHQ9HD43 1115 aa7.43□□□□□ -1.22
SDC2-208ENST00000523877 PRM3Q9NNZ6 103 aa7.43□□□□□ -1.22
SDC2-208ENST00000523877 HOMER2Q9NSB8 354 aa7.43□□□□□ -1.22
SDC2-208ENST00000523877 KIAA1468Q9P260 1216 aa7.43□□□□□ -1.22
SDC2-208ENST00000523877 PARP2Q9UGN5 583 aa7.43□□□□□ -1.22
SDC2-208ENST00000523877 MTUS1Q9ULD2 1270 aa7.43□□□□□ -1.22
SDC2-208ENST00000523877 PA2G4Q9UQ80 394 aaKnown RBP7.43□□□□□ -1.22
SDC2-208ENST00000523877 SOS1Q07889 1333 aaPredicted RBP7.43□□□□□ -1.22
SDC2-208ENST00000523877 IFT140Q96RY7 1462 aa7.43□□□□□ -1.22
SDC2-208ENST00000523877 GOLGA6L10A6NI86 522 aa7.42□□□□□ -1.22
SDC2-208ENST00000523877 EIF3FO00303 357 aaPredicted RBP7.42□□□□□ -1.22
SDC2-208ENST00000523877 TNFRSF10BO14763 440 aa7.42□□□□□ -1.22
SDC2-208ENST00000523877 DNAJA1P31689 397 aaKnown RBP7.42□□□□□ -1.22
SDC2-208ENST00000523877 UBA7P41226 1012 aa7.42□□□□□ -1.22
SDC2-208ENST00000523877 HDAC4P56524 1084 aa7.42□□□□□ -1.22
SDC2-208ENST00000523877 HSD17B7P56937 341 aa7.42□□□□□ -1.22
SDC2-208ENST00000523877 AP2B1P63010 937 aa7.42□□□□□ -1.22
SDC2-208ENST00000523877 SKOR1P84550 965 aa7.42□□□□□ -1.22
SDC2-208ENST00000523877 CRYMQ14894 314 aa7.42□□□□□ -1.22
SDC2-208ENST00000523877 PUM3Q15397 648 aaKnown RBP7.42□□□□□ -1.22
SDC2-208ENST00000523877 ATP2B3Q16720 1220 aa7.42□□□□□ -1.22
SDC2-208ENST00000523877 SH3D19Q5HYK7 790 aa7.42□□□□□ -1.22
SDC2-208ENST00000523877 RRP12Q5JTH9 1297 aaKnown RBP7.42□□□□□ -1.22
SDC2-208ENST00000523877 NAA16Q6N069 864 aaPredicted RBP7.42□□□□□ -1.22
SDC2-208ENST00000523877 CYP26C1Q6V0L0 522 aa7.42□□□□□ -1.22
SDC2-208ENST00000523877 MMS22LQ6ZRQ5 1243 aa7.42□□□□□ -1.22
SDC2-208ENST00000523877 RUFY3Q7L099 469 aa7.42□□□□□ -1.22
SDC2-208ENST00000523877 CATSPER4Q7RTX7 472 aa7.42□□□□□ -1.22
SDC2-208ENST00000523877 USP48Q86UV5 1035 aa7.42□□□□□ -1.22
SDC2-208ENST00000523877 KIAA0825Q8IV33 1275 aa7.42□□□□□ -1.22
SDC2-208ENST00000523877 RAVER1Q8IY67 606 aaKnown RBP7.42□□□□□ -1.22
SDC2-208ENST00000523877 SLC7A5P1Q8MH63 180 aa7.42□□□□□ -1.22
SDC2-208ENST00000523877 CCAR2Q8N163 923 aaKnown RBP7.42□□□□□ -1.22
SDC2-208ENST00000523877 THEMISQ8N1K5 641 aaPredicted RBP7.42□□□□□ -1.22
SDC2-208ENST00000523877 NKAIN3Q8N8D7 197 aa7.42□□□□□ -1.22
SDC2-208ENST00000523877 TNIP2Q8NFZ5 429 aa7.42□□□□□ -1.22
SDC2-208ENST00000523877 SPATA18Q8TC71 538 aa7.42□□□□□ -1.22
SDC2-208ENST00000523877 APPBP2Q92624 585 aa7.42□□□□□ -1.22
SDC2-208ENST00000523877 CLMNQ96JQ2 1002 aa7.42□□□□□ -1.22
SDC2-208ENST00000523877 C8orf76Q96K31 380 aa7.42□□□□□ -1.22
SDC2-208ENST00000523877 RUFY1Q96T51 708 aa7.42□□□□□ -1.22
SDC2-208ENST00000523877 OSBPL10Q9BXB5 764 aa7.42□□□□□ -1.22
SDC2-208ENST00000523877 SLC4A5Q9BY07 1137 aa7.42□□□□□ -1.22
SDC2-208ENST00000523877 TMEM165Q9HC07 324 aa7.42□□□□□ -1.22
SDC2-208ENST00000523877 EMILIN3Q9NT22 766 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms