RNA–Protein interactions for RNA: ENST00000523842.1

EFCAB13-212, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-212ENST00000523842 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.37□□□□□ -1.55
EFCAB13-212ENST00000523842 TNKS2Q9H2K2 1166 aa5.37□□□□□ -1.55
EFCAB13-212ENST00000523842 FBRSQ9HAH7 460 aa5.37□□□□□ -1.55
EFCAB13-212ENST00000523842 PICK1Q9NRD5 415 aa5.37□□□□□ -1.55
EFCAB13-212ENST00000523842 PPP4R2Q9NY27 417 aa5.37□□□□□ -1.55
EFCAB13-212ENST00000523842 PCDHA4Q9UN74 947 aa5.37□□□□□ -1.55
EFCAB13-212ENST00000523842 TMEM265A0A087WTH1 108 aa5.36□□□□□ -1.55
EFCAB13-212ENST00000523842 RING1Q06587 406 aa5.36□□□□□ -1.55
EFCAB13-212ENST00000523842 IKZF1Q13422 519 aa5.36□□□□□ -1.55
EFCAB13-212ENST00000523842 RIN3Q8TB24 985 aa5.36□□□□□ -1.55
EFCAB13-212ENST00000523842 KCNK12Q9HB15 430 aa5.36□□□□□ -1.55
EFCAB13-212ENST00000523842 RNF19AQ9NV58 838 aa5.36□□□□□ -1.55
EFCAB13-212ENST00000523842 ZNF503-AS2A6NEH8 195 aa5.35□□□□□ -1.55
EFCAB13-212ENST00000523842 BIN1O00499 593 aa5.35□□□□□ -1.55
EFCAB13-212ENST00000523842 SLITRK5O94991 958 aa5.35□□□□□ -1.55
EFCAB13-212ENST00000523842 XRCC5P13010 732 aaKnown RBP5.35□□□□□ -1.55
EFCAB13-212ENST00000523842 ZP2Q05996 745 aa5.35□□□□□ -1.55
EFCAB13-212ENST00000523842 NKG7Q16617 165 aa5.35□□□□□ -1.55
EFCAB13-212ENST00000523842 ZBTB37Q5TC79 503 aa5.35□□□□□ -1.55
EFCAB13-212ENST00000523842 ANGEL2Q5VTE6 544 aaKnown RBP5.35□□□□□ -1.55
EFCAB13-212ENST00000523842 LRFN4Q6PJG9 635 aa5.35□□□□□ -1.55
EFCAB13-212ENST00000523842 ARMCX6Q7L4S7 300 aa5.35□□□□□ -1.55
EFCAB13-212ENST00000523842 LIN37Q96GY3 246 aaPredicted RBP5.35□□□□□ -1.55
EFCAB13-212ENST00000523842 EMILIN2Q9BXX0 1053 aa5.35□□□□□ -1.55
EFCAB13-212ENST00000523842 PRAMEF27A3QJZ7 478 aa5.34□□□□□ -1.55
EFCAB13-212ENST00000523842 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.34□□□□□ -1.55
EFCAB13-212ENST00000523842 MESP2Q0VG99 397 aa5.34□□□□□ -1.55
EFCAB13-212ENST00000523842 CDKAL1Q5VV42 579 aa5.34□□□□□ -1.55
EFCAB13-212ENST00000523842 LLGL2Q6P1M3 1020 aa5.34□□□□□ -1.55
EFCAB13-212ENST00000523842 SLC23A3Q6PIS1 610 aa5.34□□□□□ -1.55
EFCAB13-212ENST00000523842 MKNK2Q9HBH9 465 aa5.34□□□□□ -1.55
EFCAB13-212ENST00000523842 ATP13A1Q9HD20 1204 aa5.34□□□□□ -1.55
EFCAB13-212ENST00000523842 PITPNM2Q9BZ72 1349 aa5.33□□□□□ -1.56
EFCAB13-212ENST00000523842 FARP2O94887 1054 aaPredicted RBP5.33□□□□□ -1.56
EFCAB13-212ENST00000523842 GSTT1P30711 240 aa5.33□□□□□ -1.56
EFCAB13-212ENST00000523842 MLANAQ16655 118 aa5.33□□□□□ -1.56
EFCAB13-212ENST00000523842 PCNX4Q63HM2 1172 aa5.33□□□□□ -1.56
EFCAB13-212ENST00000523842 XAGE3Q8WTP9 111 aa5.33□□□□□ -1.56
EFCAB13-212ENST00000523842 PLPPR2Q96GM1 343 aa5.33□□□□□ -1.56
EFCAB13-212ENST00000523842 HSPA12BQ96MM6 686 aa5.33□□□□□ -1.56
EFCAB13-212ENST00000523842 CARS2Q9HA77 564 aaKnown RBP5.33□□□□□ -1.56
EFCAB13-212ENST00000523842 CTNND2Q9UQB3 1225 aa5.33□□□□□ -1.56
EFCAB13-212ENST00000523842 LRRC10BA6NIK2 292 aa5.32□□□□□ -1.56
EFCAB13-212ENST00000523842 WASH4PA8MWX3 477 aa5.32□□□□□ -1.56
EFCAB13-212ENST00000523842 TRIM37O94972 964 aa5.32□□□□□ -1.56
EFCAB13-212ENST00000523842 FGD1P98174 961 aa5.32□□□□□ -1.56
EFCAB13-212ENST00000523842 SLBPQ14493 270 aaKnown RBP eCLIP5.32□□□□□ -1.56
EFCAB13-212ENST00000523842 SPOCD1Q6ZMY3 1216 aa5.32□□□□□ -1.56
EFCAB13-212ENST00000523842 CDC37L1Q7L3B6 337 aa5.32□□□□□ -1.56
EFCAB13-212ENST00000523842 TMEM40Q8WWA1 233 aa5.32□□□□□ -1.56
EFCAB13-212ENST00000523842 ELMO3Q96BJ8 720 aa5.32□□□□□ -1.56
EFCAB13-212ENST00000523842 C19orf73Q9NVV2 129 aa5.32□□□□□ -1.56
EFCAB13-212ENST00000523842 GTF2IRD1Q9UHL9 959 aa5.32□□□□□ -1.56
EFCAB13-212ENST00000523842 GNEQ9Y223 722 aaKnown RBP5.32□□□□□ -1.56
EFCAB13-212ENST00000523842 IGF2BP3O00425 579 aaKnown RBP eCLIP5.31□□□□□ -1.56
EFCAB13-212ENST00000523842 FANCGO15287 622 aa5.31□□□□□ -1.56
EFCAB13-212ENST00000523842 USP17L7P0C7H9 530 aa5.31□□□□□ -1.56
EFCAB13-212ENST00000523842 FMR1Q06787 632 aaKnown RBP eCLIP5.31□□□□□ -1.56
EFCAB13-212ENST00000523842 PRR23BQ6ZRT6 265 aa5.31□□□□□ -1.56
EFCAB13-212ENST00000523842 ZSWIM9Q86XI8 627 aa5.31□□□□□ -1.56
EFCAB13-212ENST00000523842 KSR1Q8IVT5 923 aa5.31□□□□□ -1.56
EFCAB13-212ENST00000523842 FLAD1Q8NFF5 587 aa5.31□□□□□ -1.56
EFCAB13-212ENST00000523842 GAL3ST3Q96A11 431 aa5.31□□□□□ -1.56
EFCAB13-212ENST00000523842 MIPEPQ99797 713 aa5.31□□□□□ -1.56
EFCAB13-212ENST00000523842 PRDM5Q9NQX1 630 aaPredicted RBP5.31□□□□□ -1.56
EFCAB13-212ENST00000523842 SEMA3GQ9NS98 782 aa5.31□□□□□ -1.56
EFCAB13-212ENST00000523842 PCDHB5Q9Y5E4 795 aa5.31□□□□□ -1.56
EFCAB13-212ENST00000523842 SNX11Q9Y5W9 270 aa5.31□□□□□ -1.56
EFCAB13-212ENST00000523842 DBX1A6NMT0 343 aa5.3□□□□□ -1.56
EFCAB13-212ENST00000523842 GNAT3A8MTJ3 354 aa5.3□□□□□ -1.56
EFCAB13-212ENST00000523842 H3BS24 57 aa5.3□□□□□ -1.56
EFCAB13-212ENST00000523842 P4HBP07237 508 aaKnown RBP5.3□□□□□ -1.56
EFCAB13-212ENST00000523842 KCNMB1Q16558 191 aa5.3□□□□□ -1.56
EFCAB13-212ENST00000523842 CYFIP1Q7L576 1253 aa5.3□□□□□ -1.56
EFCAB13-212ENST00000523842 ASB11Q8WXH4 323 aa5.3□□□□□ -1.56
EFCAB13-212ENST00000523842 DPH2Q9BQC3 489 aaPredicted RBP5.3□□□□□ -1.56
EFCAB13-212ENST00000523842 CEP44Q9C0F1 390 aa5.3□□□□□ -1.56
EFCAB13-212ENST00000523842 IVNS1ABPQ9Y6Y0 642 aa5.3□□□□□ -1.56
EFCAB13-212ENST00000523842 CBX7O95931 251 aa5.29□□□□□ -1.56
EFCAB13-212ENST00000523842 SEPT6Q14141 434 aa5.29□□□□□ -1.56
EFCAB13-212ENST00000523842 MAP3K11Q16584 847 aa5.29□□□□□ -1.56
EFCAB13-212ENST00000523842 CILP2Q8IUL8 1156 aa5.29□□□□□ -1.56
EFCAB13-212ENST00000523842 TPX2Q9ULW0 747 aaKnown RBP5.29□□□□□ -1.56
EFCAB13-212ENST00000523842 KRTAP9-7A8MTY7 169 aa5.28□□□□□ -1.56
EFCAB13-212ENST00000523842 FAM155AB1AL88 458 aaPredicted RBP5.28□□□□□ -1.56
EFCAB13-212ENST00000523842 LRIG2O94898 1065 aa5.28□□□□□ -1.56
EFCAB13-212ENST00000523842 BRD1O95696 1058 aa5.28□□□□□ -1.56
EFCAB13-212ENST00000523842 ETF1P62495 437 aaKnown RBP5.28□□□□□ -1.56
EFCAB13-212ENST00000523842 HNRNPUQ00839 825 aaKnown RBP eCLIP5.28□□□□□ -1.56
EFCAB13-212ENST00000523842 WIPI1Q5MNZ9 446 aaPredicted RBP5.28□□□□□ -1.56
EFCAB13-212ENST00000523842 PRAMEF13Q5VWM6 474 aa5.28□□□□□ -1.56
EFCAB13-212ENST00000523842 CDH24Q86UP0 819 aa5.28□□□□□ -1.56
EFCAB13-212ENST00000523842 ZNF507Q8TCN5 953 aa5.28□□□□□ -1.56
EFCAB13-212ENST00000523842 FOXQ1Q9C009 403 aa5.28□□□□□ -1.56
EFCAB13-212ENST00000523842 C12orf49Q9H741 205 aa5.28□□□□□ -1.56
EFCAB13-212ENST00000523842 TTF2Q9UNY4 1162 aaKnown RBP5.28□□□□□ -1.56
EFCAB13-212ENST00000523842 ST14Q9Y5Y6 855 aa5.28□□□□□ -1.56
EFCAB13-212ENST00000523842 GRK4P32298 578 aa5.27□□□□□ -1.57
EFCAB13-212ENST00000523842 ERVFC1P60507 584 aa5.27□□□□□ -1.57
EFCAB13-212ENST00000523842 LRRC14Q15048 493 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms