RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 TGIF2Q9GZN2 237 aa9.69□□□□□ -0.86
CPNE3-206ENST00000523469 C7orf69Q9H7B7 122 aa9.69□□□□□ -0.86
CPNE3-206ENST00000523469 NTF4P34130 210 aa9.68□□□□□ -0.86
CPNE3-206ENST00000523469 RAD51AP2Q09MP3 1159 aa9.68□□□□□ -0.86
CPNE3-206ENST00000523469 CWF19L2Q2TBE0 894 aaKnown RBP9.68□□□□□ -0.86
CPNE3-206ENST00000523469 ISL2Q96A47 359 aa9.68□□□□□ -0.86
CPNE3-206ENST00000523469 WNT10AQ9GZT5 417 aa9.68□□□□□ -0.86
CPNE3-206ENST00000523469 PCOLCE2Q9UKZ9 415 aa9.68□□□□□ -0.86
CPNE3-206ENST00000523469 DAGLAQ9Y4D2 1042 aa9.68□□□□□ -0.86
CPNE3-206ENST00000523469 HMX2A2RU54 273 aa9.67□□□□□ -0.86
CPNE3-206ENST00000523469 DYRK3O43781 588 aa9.67□□□□□ -0.86
CPNE3-206ENST00000523469 FURINP09958 794 aa9.67□□□□□ -0.86
CPNE3-206ENST00000523469 ERCC5P28715 1186 aaPredicted RBP9.67□□□□□ -0.86
CPNE3-206ENST00000523469 NFKBIBQ15653 356 aa9.67□□□□□ -0.86
CPNE3-206ENST00000523469 REC114Q7Z4M0 266 aa9.67□□□□□ -0.86
CPNE3-206ENST00000523469 KCT2Q8NC54 265 aa9.67□□□□□ -0.86
CPNE3-206ENST00000523469 FBXO27Q8NI29 283 aa9.67□□□□□ -0.86
CPNE3-206ENST00000523469 ZNF507Q8TCN5 953 aa9.67□□□□□ -0.86
CPNE3-206ENST00000523469 SSU72Q9NP77 194 aaKnown RBP9.67□□□□□ -0.86
CPNE3-206ENST00000523469 ETF1P62495 437 aaKnown RBP9.66□□□□□ -0.86
CPNE3-206ENST00000523469 PDE4BQ07343 736 aa9.66□□□□□ -0.86
CPNE3-206ENST00000523469 CDC37L1Q7L3B6 337 aa9.66□□□□□ -0.86
CPNE3-206ENST00000523469 NPM2Q86SE8 214 aaKnown RBP9.66□□□□□ -0.86
CPNE3-206ENST00000523469 EAF1Q96JC9 268 aaPredicted RBP9.66□□□□□ -0.86
CPNE3-206ENST00000523469 CCSER2Q9H7U1 834 aa9.66□□□□□ -0.86
CPNE3-206ENST00000523469 UBP1Q9NZI7 540 aa9.66□□□□□ -0.86
CPNE3-206ENST00000523469 TLR3O15455 904 aaKnown RBP9.65□□□□□ -0.86
CPNE3-206ENST00000523469 GSC2O15499 205 aa9.65□□□□□ -0.86
CPNE3-206ENST00000523469 GRK4P32298 578 aa9.65□□□□□ -0.86
CPNE3-206ENST00000523469 CRKP46108 304 aa9.65□□□□□ -0.86
CPNE3-206ENST00000523469 APOBRQ0VD83 1088 aa9.65□□□□□ -0.86
CPNE3-206ENST00000523469 RNF43Q68DV7 783 aa9.65□□□□□ -0.86
CPNE3-206ENST00000523469 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.65□□□□□ -0.86
CPNE3-206ENST00000523469 SEZ6L2Q6UXD5 910 aa9.64□□□□□ -0.87
CPNE3-206ENST00000523469 SLC51AQ86UW1 340 aa9.64□□□□□ -0.87
CPNE3-206ENST00000523469 FSTP19883 344 aa9.63□□□□□ -0.87
CPNE3-206ENST00000523469 PAK2Q13177 524 aa9.63□□□□□ -0.87
CPNE3-206ENST00000523469 SEZ6Q53EL9 994 aa9.63□□□□□ -0.87
CPNE3-206ENST00000523469 HID1Q8IV36 788 aa9.63□□□□□ -0.87
CPNE3-206ENST00000523469 NKD1Q969G9 470 aa9.63□□□□□ -0.87
CPNE3-206ENST00000523469 SEMA6BQ9H3T3 888 aa9.63□□□□□ -0.87
CPNE3-206ENST00000523469 PRKAG2Q9UGJ0 569 aa9.63□□□□□ -0.87
CPNE3-206ENST00000523469 ADAM30Q9UKF2 790 aa9.63□□□□□ -0.87
CPNE3-206ENST00000523469 POLR3KQ9Y2Y1 108 aaPredicted RBP9.63□□□□□ -0.87
CPNE3-206ENST00000523469 PRR36Q9H6K5 1346 aa9.62□□□□□ -0.87
CPNE3-206ENST00000523469 DYNC1LI2O43237 492 aaPredicted RBP9.62□□□□□ -0.87
CPNE3-206ENST00000523469 PGRP06401 933 aa9.62□□□□□ -0.87
CPNE3-206ENST00000523469 NFIAQ12857 509 aa9.62□□□□□ -0.87
CPNE3-206ENST00000523469 SLITRK4Q8IW52 837 aa9.62□□□□□ -0.87
CPNE3-206ENST00000523469 SPATA32Q96LK8 384 aa9.62□□□□□ -0.87
CPNE3-206ENST00000523469 ACBD3Q9H3P7 528 aa9.62□□□□□ -0.87
CPNE3-206ENST00000523469 LGR6Q9HBX8 967 aa9.62□□□□□ -0.87
CPNE3-206ENST00000523469 BRMS1Q9HCU9 246 aa9.62□□□□□ -0.87
CPNE3-206ENST00000523469 C1GALT1Q9NS00 363 aa9.62□□□□□ -0.87
CPNE3-206ENST00000523469 CCDC180Q9P1Z9 1646 aa9.61□□□□□ -0.87
CPNE3-206ENST00000523469 IGLV1-40P01703 118 aa9.61□□□□□ -0.87
CPNE3-206ENST00000523469 CAP2P40123 477 aa9.61□□□□□ -0.87
CPNE3-206ENST00000523469 UBE3DQ7Z6J8 389 aa9.61□□□□□ -0.87
CPNE3-206ENST00000523469 DBNDD2Q9BQY9 259 aa9.61□□□□□ -0.87
CPNE3-206ENST00000523469 FBRSQ9HAH7 460 aa9.61□□□□□ -0.87
CPNE3-206ENST00000523469 CORINQ9Y5Q5 1042 aa9.61□□□□□ -0.87
CPNE3-206ENST00000523469 PLCG1P19174 1290 aa9.6□□□□□ -0.87
CPNE3-206ENST00000523469 GJA8P48165 433 aa9.6□□□□□ -0.87
CPNE3-206ENST00000523469 ZAR1Q86SH2 424 aa9.6□□□□□ -0.87
CPNE3-206ENST00000523469 REXO1Q8N1G1 1221 aaKnown RBP9.6□□□□□ -0.87
CPNE3-206ENST00000523469 GIMAP7Q8NHV1 300 aa9.6□□□□□ -0.87
CPNE3-206ENST00000523469 GPRASP2Q96D09 838 aa9.6□□□□□ -0.87
CPNE3-206ENST00000523469 INPP5FQ9Y2H2 1132 aa9.6□□□□□ -0.87
CPNE3-206ENST00000523469 K7ELQ4 463 aaPredicted RBP9.59□□□□□ -0.87
CPNE3-206ENST00000523469 GRIN3BO60391 1043 aa9.59□□□□□ -0.87
CPNE3-206ENST00000523469 ZNF165P49910 485 aa9.59□□□□□ -0.87
CPNE3-206ENST00000523469 SLBPQ14493 270 aaKnown RBP eCLIP9.59□□□□□ -0.87
CPNE3-206ENST00000523469 TMEM201Q5SNT2 666 aa9.59□□□□□ -0.87
CPNE3-206ENST00000523469 RASGRP4Q8TDF6 673 aa9.59□□□□□ -0.87
CPNE3-206ENST00000523469 MFSD14AQ96MC6 490 aa9.59□□□□□ -0.87
CPNE3-206ENST00000523469 TBC1D32Q96NH3 1257 aa9.59□□□□□ -0.87
CPNE3-206ENST00000523469 PSMG3-AS1Q96PY0 264 aa9.59□□□□□ -0.87
CPNE3-206ENST00000523469 LRIG2O94898 1065 aa9.58□□□□□ -0.88
CPNE3-206ENST00000523469 ATE1O95260 518 aa9.58□□□□□ -0.88
CPNE3-206ENST00000523469 HTR3BO95264 441 aa9.58□□□□□ -0.88
CPNE3-206ENST00000523469 MCM4P33991 863 aa9.58□□□□□ -0.88
CPNE3-206ENST00000523469 CDK5R2Q13319 367 aa9.58□□□□□ -0.88
CPNE3-206ENST00000523469 NKG7Q16617 165 aa9.58□□□□□ -0.88
CPNE3-206ENST00000523469 PRSS36Q5K4E3 855 aa9.58□□□□□ -0.88
CPNE3-206ENST00000523469 MRPL41Q8IXM3 137 aaKnown RBP9.58□□□□□ -0.88
CPNE3-206ENST00000523469 FBXL6Q8N531 539 aa9.58□□□□□ -0.88
CPNE3-206ENST00000523469 GATA6Q92908 595 aa9.58□□□□□ -0.88
CPNE3-206ENST00000523469 EHMT1Q9H9B1 1298 aa9.58□□□□□ -0.88
CPNE3-206ENST00000523469 REV1Q9UBZ9 1251 aa9.58□□□□□ -0.88
CPNE3-206ENST00000523469 TJP2Q9UDY2 1190 aa9.58□□□□□ -0.88
CPNE3-206ENST00000523469 PCDHB14Q9Y5E9 798 aa9.58□□□□□ -0.88
CPNE3-206ENST00000523469 ADMP35318 185 aa9.57□□□□□ -0.88
CPNE3-206ENST00000523469 COL9A2Q14055 689 aaPredicted RBP9.57□□□□□ -0.88
CPNE3-206ENST00000523469 MLECQ14165 292 aa9.57□□□□□ -0.88
CPNE3-206ENST00000523469 SLC6A19Q695T7 634 aa9.57□□□□□ -0.88
CPNE3-206ENST00000523469 ARMCX6Q7L4S7 300 aa9.57□□□□□ -0.88
CPNE3-206ENST00000523469 MCATQ8IVS2 390 aaKnown RBP9.57□□□□□ -0.88
CPNE3-206ENST00000523469 ACSF2Q96CM8 615 aaPredicted RBP9.57□□□□□ -0.88
CPNE3-206ENST00000523469 TMEM87BQ96K49 555 aa9.57□□□□□ -0.88
CPNE3-206ENST00000523469 FOXQ1Q9C009 403 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms