RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 GCLCP48506 637 aaPredicted RBP11.59□□□□□ -0.55
SDC2-207ENST00000522911 FLT3LGP49771 235 aa11.59□□□□□ -0.55
SDC2-207ENST00000522911 PPP4CP60510 307 aa11.59□□□□□ -0.55
SDC2-207ENST00000522911 PABPC4Q13310 644 aaKnown RBP eCLIP11.59□□□□□ -0.55
SDC2-207ENST00000522911 TMED8Q6PL24 325 aaPredicted RBP11.59□□□□□ -0.55
SDC2-207ENST00000522911 ATF7IPQ6VMQ6 1270 aa11.59□□□□□ -0.55
SDC2-207ENST00000522911 U2AF1L4Q8WU68 220 aaKnown RBP11.59□□□□□ -0.55
SDC2-207ENST00000522911 ZNF512BQ96KM6 892 aaPredicted RBP11.59□□□□□ -0.55
SDC2-207ENST00000522911 RNF208Q9H0X6 261 aa11.59□□□□□ -0.55
SDC2-207ENST00000522911 DHX36Q9H2U1 1008 aaKnown RBP11.59□□□□□ -0.55
SDC2-207ENST00000522911 PAK6Q9NQU5 681 aaPredicted RBP11.59□□□□□ -0.55
SDC2-207ENST00000522911 GABRQQ9UN88 632 aa11.59□□□□□ -0.55
SDC2-207ENST00000522911 MGAMO43451 1857 aa11.58□□□□□ -0.56
SDC2-207ENST00000522911 PLCG2P16885 1265 aa11.58□□□□□ -0.56
SDC2-207ENST00000522911 CAP2P40123 477 aa11.58□□□□□ -0.56
SDC2-207ENST00000522911 GADL1Q6ZQY3 521 aa11.58□□□□□ -0.56
SDC2-207ENST00000522911 ZNF280CQ8ND82 737 aa11.58□□□□□ -0.56
SDC2-207ENST00000522911 SMCR8Q8TEV9 937 aaPredicted RBP11.58□□□□□ -0.56
SDC2-207ENST00000522911 WDR18Q9BV38 432 aa11.58□□□□□ -0.56
SDC2-207ENST00000522911 CRISPLD2Q9H0B8 497 aa11.58□□□□□ -0.56
SDC2-207ENST00000522911 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.58□□□□□ -0.567e-12■■■□□ 14.7
SDC2-207ENST00000522911 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.58□□□□□ -0.56
SDC2-207ENST00000522911 LOC285556D6RIA3 1793 aa11.58□□□□□ -0.56
SDC2-207ENST00000522911 TRIOBPQ9H2D6 2365 aa11.57□□□□□ -0.56
SDC2-207ENST00000522911 TRIM75PA6NK02 468 aa11.57□□□□□ -0.56
SDC2-207ENST00000522911 USP17L5A8MUK1 530 aa11.57□□□□□ -0.56
SDC2-207ENST00000522911 TNPO2O14787 897 aaKnown RBP11.57□□□□□ -0.56
SDC2-207ENST00000522911 HOXA7P31268 230 aaPredicted RBP11.57□□□□□ -0.56
SDC2-207ENST00000522911 MCAMP43121 646 aa11.57□□□□□ -0.56
SDC2-207ENST00000522911 G3BP1Q13283 466 aaKnown RBP eCLIP11.57□□□□□ -0.56
SDC2-207ENST00000522911 PICALMQ13492 652 aa11.57□□□□□ -0.56
SDC2-207ENST00000522911 POLA2Q14181 598 aa11.57□□□□□ -0.56
SDC2-207ENST00000522911 COA7Q96BR5 231 aa11.57□□□□□ -0.56
SDC2-207ENST00000522911 PI4KBQ9UBF8 816 aa11.57□□□□□ -0.56
SDC2-207ENST00000522911 MORF4L1Q9UBU8 362 aa11.57□□□□□ -0.56
SDC2-207ENST00000522911 NR2E3Q9Y5X4 410 aa11.57□□□□□ -0.56
SDC2-207ENST00000522911 PNMA6EA0A0J9YXQ4 647 aa11.56□□□□□ -0.56
SDC2-207ENST00000522911 ASNSP08243 561 aa11.56□□□□□ -0.56
SDC2-207ENST00000522911 TREML2Q5T2D2 321 aa11.56□□□□□ -0.56
SDC2-207ENST00000522911 GORABQ5T7V8 394 aa11.56□□□□□ -0.56
SDC2-207ENST00000522911 CERS3Q8IU89 383 aa11.56□□□□□ -0.56
SDC2-207ENST00000522911 ANKLE1Q8NAG6 615 aa11.56□□□□□ -0.56
SDC2-207ENST00000522911 SSH3Q8TE77 659 aa11.56□□□□□ -0.56
SDC2-207ENST00000522911 NEUROD6Q96NK8 337 aa11.56□□□□□ -0.56
SDC2-207ENST00000522911 UNC93B1Q9H1C4 597 aa11.56□□□□□ -0.56
SDC2-207ENST00000522911 AS3MTQ9HBK9 375 aa11.56□□□□□ -0.56
SDC2-207ENST00000522911 BIN2Q9UBW5 565 aaPredicted RBP11.56□□□□□ -0.56
SDC2-207ENST00000522911 GJD2Q9UKL4 321 aa11.56□□□□□ -0.56
SDC2-207ENST00000522911 ZBTB7BO15156 539 aaPredicted RBP11.55□□□□□ -0.56
SDC2-207ENST00000522911 FARP2O94887 1054 aaPredicted RBP11.55□□□□□ -0.56
SDC2-207ENST00000522911 BAG3O95817 575 aa11.55□□□□□ -0.56
SDC2-207ENST00000522911 MYCP01106 439 aaPredicted RBP11.55□□□□□ -0.56
SDC2-207ENST00000522911 INHAP05111 366 aa11.55□□□□□ -0.56
SDC2-207ENST00000522911 SPP2Q13103 211 aa11.55□□□□□ -0.56
SDC2-207ENST00000522911 PI16Q6UXB8 463 aa11.55□□□□□ -0.56
SDC2-207ENST00000522911 FOXP4Q8IVH2 680 aaPredicted RBP11.55□□□□□ -0.56
SDC2-207ENST00000522911 TEX11Q8IYF3 940 aa11.55□□□□□ -0.56
SDC2-207ENST00000522911 NOP58Q9Y2X3 529 aaKnown RBP11.55□□□□□ -0.56
SDC2-207ENST00000522911 C19orf81C9J6K1 198 aa11.54□□□□□ -0.56
SDC2-207ENST00000522911 HMGCRP04035 888 aa11.54□□□□□ -0.56
SDC2-207ENST00000522911 SLURP2P0DP57 97 aa11.54□□□□□ -0.56
SDC2-207ENST00000522911 XRCC5P13010 732 aaKnown RBP11.54□□□□□ -0.56
SDC2-207ENST00000522911 BACE1P56817 501 aa11.54□□□□□ -0.56
SDC2-207ENST00000522911 NAA16Q6N069 864 aaPredicted RBP11.54□□□□□ -0.56
SDC2-207ENST00000522911 TBC1D9Q6ZT07 1266 aa11.54□□□□□ -0.56
SDC2-207ENST00000522911 ANKRD13CQ8N6S4 541 aa11.54□□□□□ -0.56
SDC2-207ENST00000522911 GTF3C2Q8WUA4 911 aaPredicted RBP11.54□□□□□ -0.56
SDC2-207ENST00000522911 DPF3Q92784 378 aa11.54□□□□□ -0.56
SDC2-207ENST00000522911 NOL10Q9BSC4 688 aaKnown RBP11.54□□□□□ -0.56
SDC2-207ENST00000522911 ASCC2Q9H1I8 757 aaPredicted RBP11.54□□□□□ -0.56
SDC2-207ENST00000522911 RAI14Q9P0K7 980 aa11.54□□□□□ -0.56
SDC2-207ENST00000522911 LRP2BPQ9P2M1 347 aa11.54□□□□□ -0.56
SDC2-207ENST00000522911 RBM27Q9P2N5 1060 aaKnown RBP11.54□□□□□ -0.56
SDC2-207ENST00000522911 MAST2Q6P0Q8 1798 aa11.54□□□□□ -0.56
SDC2-207ENST00000522911 CYP2E1P05181 493 aaPredicted RBP11.53□□□□□ -0.56
SDC2-207ENST00000522911 ELNP15502 786 aa11.53□□□□□ -0.56
SDC2-207ENST00000522911 HMGCS2P54868 508 aa11.53□□□□□ -0.56
SDC2-207ENST00000522911 ATP8B2P98198 1209 aa11.53□□□□□ -0.56
SDC2-207ENST00000522911 RRP1BQ14684 758 aaKnown RBP11.53□□□□□ -0.56
SDC2-207ENST00000522911 TNNI3KQ59H18 835 aa11.53□□□□□ -0.56
SDC2-207ENST00000522911 CCDC158Q5M9N0 1113 aa11.53□□□□□ -0.56
SDC2-207ENST00000522911 MAP3K21Q5TCX8 1036 aa11.53□□□□□ -0.56
SDC2-207ENST00000522911 CHRDL2Q6WN34 429 aa11.53□□□□□ -0.56
SDC2-207ENST00000522911 SH3RF3Q8TEJ3 882 aaPredicted RBP11.53□□□□□ -0.56
SDC2-207ENST00000522911 DNAJC18Q9H819 358 aa11.53□□□□□ -0.56
SDC2-207ENST00000522911 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.53□□□□□ -0.56
SDC2-207ENST00000522911 FPGT-TNNI3KV9GXZ4 949 aa11.53□□□□□ -0.56
SDC2-207ENST00000522911 COL6A3P12111 3177 aa11.53□□□□□ -0.56
SDC2-207ENST00000522911 FLT1P17948 1338 aa11.53□□□□□ -0.56
SDC2-207ENST00000522911 RPTORQ8N122 1335 aa11.53□□□□□ -0.56
SDC2-207ENST00000522911 SIPA1L1O43166 1804 aa11.52□□□□□ -0.57
SDC2-207ENST00000522911 FAM196BA6NMK8 535 aa11.52□□□□□ -0.57
SDC2-207ENST00000522911 BCAR3O75815 825 aa11.52□□□□□ -0.57
SDC2-207ENST00000522911 ZKSCAN2Q63HK3 967 aa11.52□□□□□ -0.57
SDC2-207ENST00000522911 CCDC84Q86UT8 332 aaPredicted RBP11.52□□□□□ -0.57
SDC2-207ENST00000522911 TRMT44Q8IYL2 757 aaKnown RBP11.52□□□□□ -0.57
SDC2-207ENST00000522911 SOCS4Q8WXH5 440 aa11.52□□□□□ -0.57
SDC2-207ENST00000522911 C12orf42Q96LP6 360 aa11.52□□□□□ -0.57
SDC2-207ENST00000522911 DEFB118Q96PH6 123 aa11.52□□□□□ -0.57
SDC2-207ENST00000522911 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.52□□□□□ -0.575e-8■□□□□ 10
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms