RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 ANKRD26Q9UPS8 1709 aa9.27□□□□□ -0.93
SDCBP-210ENST00000522843 FER1L6Q2WGJ9 1857 aa9.27□□□□□ -0.93
SDCBP-210ENST00000522843 PDE4DIPQ5VU43 2346 aa9.27□□□□□ -0.93
SDCBP-210ENST00000522843 KIF20BQ96Q89 1820 aa9.26□□□□□ -0.93
SDCBP-210ENST00000522843 TMEM88BA6NKF7 163 aa9.26□□□□□ -0.93
SDCBP-210ENST00000522843 ERVV-2B6SEH9 535 aa9.26□□□□□ -0.93
SDCBP-210ENST00000522843 LILRB5O75023 590 aa9.26□□□□□ -0.93
SDCBP-210ENST00000522843 FLIIQ13045 1269 aa9.26□□□□□ -0.93
SDCBP-210ENST00000522843 ADGRE1Q14246 886 aa9.26□□□□□ -0.93
SDCBP-210ENST00000522843 NFIXQ14938 502 aa9.26□□□□□ -0.93
SDCBP-210ENST00000522843 TBCELQ5QJ74 424 aa9.26□□□□□ -0.93
SDCBP-210ENST00000522843 RHPN1Q8TCX5 695 aa9.26□□□□□ -0.93
SDCBP-210ENST00000522843 ADAMTSL1Q8N6G6 1762 aa9.26□□□□□ -0.93
SDCBP-210ENST00000522843 RASSF10A6NK89 507 aa9.25□□□□□ -0.93
SDCBP-210ENST00000522843 RAD21O60216 631 aa9.25□□□□□ -0.93
SDCBP-210ENST00000522843 PTCD1O75127 700 aaKnown RBP9.25□□□□□ -0.93
SDCBP-210ENST00000522843 RAB44Q7Z6P3 723 aaPredicted RBP9.25□□□□□ -0.93
SDCBP-210ENST00000522843 C2CD5Q86YS7 1000 aa9.25□□□□□ -0.93
SDCBP-210ENST00000522843 CEP63Q96MT8 703 aa9.25□□□□□ -0.93
SDCBP-210ENST00000522843 ALG2Q9H553 416 aa9.25□□□□□ -0.93
SDCBP-210ENST00000522843 BRD7Q9NPI1 651 aa9.25□□□□□ -0.93
SDCBP-210ENST00000522843 ANKIB1Q9P2G1 1089 aa9.25□□□□□ -0.93
SDCBP-210ENST00000522843 ANKRD31Q8N7Z5 1873 aa9.25□□□□□ -0.93
SDCBP-210ENST00000522843 THSD7BQ9C0I4 1608 aa9.24□□□□□ -0.93
SDCBP-210ENST00000522843 ELNP15502 786 aa9.24□□□□□ -0.93
SDCBP-210ENST00000522843 SELPP16109 830 aa9.24□□□□□ -0.93
SDCBP-210ENST00000522843 MBTPS1Q14703 1052 aa9.24□□□□□ -0.93
SDCBP-210ENST00000522843 SH3PXD2AQ5TCZ1 1133 aa9.24□□□□□ -0.93
SDCBP-210ENST00000522843 C1orf53Q5VUE5 145 aa9.24□□□□□ -0.93
SDCBP-210ENST00000522843 LDHDQ86WU2 507 aa9.24□□□□□ -0.93
SDCBP-210ENST00000522843 NFATC2IPQ8NCF5 419 aa9.24□□□□□ -0.93
SDCBP-210ENST00000522843 TAF1DQ9H5J8 278 aaPredicted RBP9.24□□□□□ -0.93
SDCBP-210ENST00000522843 KCNH4Q9UQ05 1017 aa9.24□□□□□ -0.93
SDCBP-210ENST00000522843 COL11A2P13942 1736 aaPredicted RBP9.24□□□□□ -0.93
SDCBP-210ENST00000522843 SOS1Q07889 1333 aaPredicted RBP9.24□□□□□ -0.93
SDCBP-210ENST00000522843 WASHC2AQ641Q2 1341 aa9.24□□□□□ -0.93
SDCBP-210ENST00000522843 A0A0A0MRY4 1105 aa9.23□□□□□ -0.93
SDCBP-210ENST00000522843 ST20-MTHFSA0A0A6YYL1 179 aa9.23□□□□□ -0.93
SDCBP-210ENST00000522843 POM121CA8CG34 1229 aa9.23□□□□□ -0.93
SDCBP-210ENST00000522843 C21orf2O43822 256 aa9.23□□□□□ -0.93
SDCBP-210ENST00000522843 SERPINB2P05120 415 aa9.23□□□□□ -0.93
SDCBP-210ENST00000522843 NCOA4Q13772 614 aa9.23□□□□□ -0.93
SDCBP-210ENST00000522843 LENG1Q96BZ8 264 aaPredicted RBP9.23□□□□□ -0.93
SDCBP-210ENST00000522843 WDR33Q9C0J8 1336 aaKnown RBP9.23□□□□□ -0.93
SDCBP-210ENST00000522843 SCN4AP35499 1836 aa9.22□□□□□ -0.93
SDCBP-210ENST00000522843 SFI1A8K8P3 1242 aa9.22□□□□□ -0.93
SDCBP-210ENST00000522843 PPM1GO15355 546 aaPredicted RBP9.22□□□□□ -0.93
SDCBP-210ENST00000522843 NRG1Q02297 640 aaPredicted RBP9.22□□□□□ -0.93
SDCBP-210ENST00000522843 LRP8Q14114 963 aa9.22□□□□□ -0.93
SDCBP-210ENST00000522843 DEFB115Q30KQ5 88 aa9.22□□□□□ -0.93
SDCBP-210ENST00000522843 TXNRD3Q86VQ6 643 aa9.22□□□□□ -0.93
SDCBP-210ENST00000522843 DNAJC10Q8IXB1 793 aa9.22□□□□□ -0.93
SDCBP-210ENST00000522843 KRTAP4-12Q9BQ66 201 aa9.22□□□□□ -0.93
SDCBP-210ENST00000522843 LTBP3Q9NS15 1303 aa9.22□□□□□ -0.93
SDCBP-210ENST00000522843 LTBP1Q14766 1721 aa9.22□□□□□ -0.93
SDCBP-210ENST00000522843 CABP4P57796 275 aa9.21□□□□□ -0.94
SDCBP-210ENST00000522843 MAP2K1Q02750 393 aaPredicted RBP9.21□□□□□ -0.94
SDCBP-210ENST00000522843 FMR1Q06787 632 aaKnown RBP eCLIP9.21□□□□□ -0.94
SDCBP-210ENST00000522843 EIF4A2Q14240 407 aaKnown RBP9.21□□□□□ -0.94
SDCBP-210ENST00000522843 LCE3BQ5TA77 95 aa9.21□□□□□ -0.94
SDCBP-210ENST00000522843 ADAMTS19Q8TE59 1207 aa9.21□□□□□ -0.94
SDCBP-210ENST00000522843 HSH2DQ96JZ2 352 aa9.21□□□□□ -0.94
SDCBP-210ENST00000522843 POLKQ9UBT6 870 aa9.21□□□□□ -0.94
SDCBP-210ENST00000522843 NARFQ9UHQ1 456 aa9.21□□□□□ -0.94
SDCBP-210ENST00000522843 HCN4Q9Y3Q4 1203 aa9.21□□□□□ -0.94
SDCBP-210ENST00000522843 SLX4Q8IY92 1834 aa9.21□□□□□ -0.94
SDCBP-210ENST00000522843 H0YIN7 160 aa9.2□□□□□ -0.94
SDCBP-210ENST00000522843 CYP19A1P11511 503 aaPredicted RBP9.2□□□□□ -0.94
SDCBP-210ENST00000522843 PSMA6P60900 246 aaKnown RBP9.2□□□□□ -0.94
SDCBP-210ENST00000522843 RAC1P63000 192 aa9.2□□□□□ -0.94
SDCBP-210ENST00000522843 MAP1SQ66K74 1059 aaPredicted RBP9.2□□□□□ -0.94
SDCBP-210ENST00000522843 WWC1Q8IX03 1113 aa9.2□□□□□ -0.94
SDCBP-210ENST00000522843 BHMTQ93088 406 aa9.2□□□□□ -0.94
SDCBP-210ENST00000522843 MCOLN1Q9GZU1 580 aa9.2□□□□□ -0.94
SDCBP-210ENST00000522843 TAOK3Q9H2K8 898 aa9.2□□□□□ -0.94
SDCBP-210ENST00000522843 CHMP3Q9Y3E7 222 aa9.2□□□□□ -0.94
SDCBP-210ENST00000522843 ZNF541Q9H0D2 1346 aa9.2□□□□□ -0.94
SDCBP-210ENST00000522843 IQCA1LA6NCM1 817 aa9.19□□□□□ -0.94
SDCBP-210ENST00000522843 HYAL3O43820 417 aaPredicted RBP9.19□□□□□ -0.94
SDCBP-210ENST00000522843 HIRAP54198 1017 aaPredicted RBP9.19□□□□□ -0.94
SDCBP-210ENST00000522843 EAPPQ56P03 285 aaPredicted RBP9.19□□□□□ -0.94
SDCBP-210ENST00000522843 ZNF622Q969S3 477 aaKnown RBP eCLIP9.19□□□□□ -0.94
SDCBP-210ENST00000522843 CLUAP1Q96AJ1 413 aa9.19□□□□□ -0.94
SDCBP-210ENST00000522843 PHACTR1Q9C0D0 580 aa9.19□□□□□ -0.94
SDCBP-210ENST00000522843 ZBTB1Q9Y2K1 713 aa9.19□□□□□ -0.94
SDCBP-210ENST00000522843 COL15A1P39059 1388 aa9.19□□□□□ -0.94
SDCBP-210ENST00000522843 HSP90AB1P08238 724 aaKnown RBP9.18□□□□□ -0.94
SDCBP-210ENST00000522843 TYRO3Q06418 890 aa9.18□□□□□ -0.94
SDCBP-210ENST00000522843 CACNA1SQ13698 1873 aa9.18□□□□□ -0.94
SDCBP-210ENST00000522843 PRR5LQ6MZQ0 368 aa9.18□□□□□ -0.94
SDCBP-210ENST00000522843 ZNF530Q6P9A1 599 aaPredicted RBP9.18□□□□□ -0.94
SDCBP-210ENST00000522843 TRIM50Q86XT4 487 aa9.18□□□□□ -0.94
SDCBP-210ENST00000522843 CNTROBQ8N137 903 aa9.18□□□□□ -0.94
SDCBP-210ENST00000522843 DEPDC4Q8N2C3 294 aa9.18□□□□□ -0.94
SDCBP-210ENST00000522843 ZNF280CQ8ND82 737 aa9.18□□□□□ -0.94
SDCBP-210ENST00000522843 TP53INP1Q96A56 240 aa9.18□□□□□ -0.94
SDCBP-210ENST00000522843 SUSD3Q96L08 255 aa9.18□□□□□ -0.94
SDCBP-210ENST00000522843 UBE2OQ9C0C9 1292 aaKnown RBP9.18□□□□□ -0.94
SDCBP-210ENST00000522843 JPH1Q9HDC5 661 aaPredicted RBP9.18□□□□□ -0.94
SDCBP-210ENST00000522843 CASP8AP2Q9UKL3 1982 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms