RNA–Protein interactions for RNA: ENST00000522590.1

IPCEF1-213, Transcript of interaction protein for cytohesin exchange factors 1, humanhuman

TSL 2

Gene IPCEF1, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPCEF1-213ENST00000522590 RPAP2Q8IXW5 612 aaPredicted RBP9.52□□□□□ -0.88
IPCEF1-213ENST00000522590 MARCH10Q8NA82 808 aaPredicted RBP9.52□□□□□ -0.88
IPCEF1-213ENST00000522590 OR8K1Q8NGG5 319 aa9.52□□□□□ -0.88
IPCEF1-213ENST00000522590 USP33Q8TEY7 942 aa9.52□□□□□ -0.88
IPCEF1-213ENST00000522590 SMARCC1Q92922 1105 aaPredicted RBP9.52□□□□□ -0.88
IPCEF1-213ENST00000522590 VMP1Q96GC9 406 aa9.52□□□□□ -0.88
IPCEF1-213ENST00000522590 MPHOSPH6Q99547 160 aaKnown RBP9.52□□□□□ -0.88
IPCEF1-213ENST00000522590 BATF3Q9NR55 127 aa9.52□□□□□ -0.88
IPCEF1-213ENST00000522590 DNAAF2Q9NVR5 837 aaKnown RBP9.52□□□□□ -0.88
IPCEF1-213ENST00000522590 C6orf203Q9P0P8 240 aaPredicted RBP9.52□□□□□ -0.88
IPCEF1-213ENST00000522590 TMCC3Q9ULS5 477 aa9.52□□□□□ -0.88
IPCEF1-213ENST00000522590 ATP6V0A2Q9Y487 856 aa9.52□□□□□ -0.88
IPCEF1-213ENST00000522590 MTA2O94776 668 aa9.52□□□□□ -0.89
IPCEF1-213ENST00000522590 LRSAM1Q6UWE0 723 aa9.52□□□□□ -0.89
IPCEF1-213ENST00000522590 IQCA1Q86XH1 822 aa9.52□□□□□ -0.89
IPCEF1-213ENST00000522590 REXO1L1PQ8IX06 675 aa9.52□□□□□ -0.89
IPCEF1-213ENST00000522590 UTP14AQ9BVJ6 771 aaKnown RBP9.52□□□□□ -0.89
IPCEF1-213ENST00000522590 LRRCC1Q9C099 1032 aa9.52□□□□□ -0.89
IPCEF1-213ENST00000522590 TFIP11Q9UBB9 837 aaKnown RBP9.52□□□□□ -0.89
IPCEF1-213ENST00000522590 MINK1Q8N4C8 1332 aaPredicted RBP9.52□□□□□ -0.89
IPCEF1-213ENST00000522590 CLK1P49759 484 aaKnown RBP9.51□□□□□ -0.89
IPCEF1-213ENST00000522590 SH3BGRP55822 239 aaPredicted RBP9.51□□□□□ -0.89
IPCEF1-213ENST00000522590 AGAP9Q5VTM2 703 aa9.51□□□□□ -0.89
IPCEF1-213ENST00000522590 RNF168Q8IYW5 571 aaPredicted RBP9.51□□□□□ -0.89
IPCEF1-213ENST00000522590 ABTB2Q8N961 1025 aa9.51□□□□□ -0.89
IPCEF1-213ENST00000522590 RETREG2Q8NC44 543 aa9.51□□□□□ -0.89
IPCEF1-213ENST00000522590 ARHGAP45Q92619 1136 aa9.51□□□□□ -0.89
IPCEF1-213ENST00000522590 DTNBP1Q96EV8 351 aa9.51□□□□□ -0.89
IPCEF1-213ENST00000522590 DHTKD1Q96HY7 919 aaPredicted RBP9.51□□□□□ -0.89
IPCEF1-213ENST00000522590 CORO1BQ9BR76 489 aa9.51□□□□□ -0.89
IPCEF1-213ENST00000522590 DHX36Q9H2U1 1008 aaKnown RBP9.51□□□□□ -0.89
IPCEF1-213ENST00000522590 POLR3AO14802 1390 aaPredicted RBP9.51□□□□□ -0.89
IPCEF1-213ENST00000522590 PAPPAQ13219 1627 aa9.51□□□□□ -0.89
IPCEF1-213ENST00000522590 AKAP12Q02952 1782 aa9.51□□□□□ -0.89
IPCEF1-213ENST00000522590 POLR3GO15318 223 aaPredicted RBP9.51□□□□□ -0.89
IPCEF1-213ENST00000522590 H2AFXP16104 143 aaPredicted RBP9.51□□□□□ -0.89
IPCEF1-213ENST00000522590 RPL17P18621 184 aaKnown RBP9.51□□□□□ -0.89
IPCEF1-213ENST00000522590 PRELPP51888 382 aa9.51□□□□□ -0.89
IPCEF1-213ENST00000522590 WASHC5Q12768 1159 aa9.51□□□□□ -0.89
IPCEF1-213ENST00000522590 EIF4A2Q14240 407 aaKnown RBP9.51□□□□□ -0.89
IPCEF1-213ENST00000522590 RCN1Q15293 331 aa9.51□□□□□ -0.89
IPCEF1-213ENST00000522590 COBLL1Q53SF7 1204 aa9.51□□□□□ -0.89
IPCEF1-213ENST00000522590 CWF19L1Q69YN2 538 aaKnown RBP9.51□□□□□ -0.89
IPCEF1-213ENST00000522590 TOM1L2Q6ZVM7 507 aa9.51□□□□□ -0.89
IPCEF1-213ENST00000522590 PLPP6Q8IY26 295 aa9.51□□□□□ -0.89
IPCEF1-213ENST00000522590 CCDC150Q8NCX0 1101 aa9.51□□□□□ -0.89
IPCEF1-213ENST00000522590 BICD2Q8TD16 824 aa9.51□□□□□ -0.89
IPCEF1-213ENST00000522590 KAT2BQ92831 832 aa9.51□□□□□ -0.89
IPCEF1-213ENST00000522590 ERO1AQ96HE7 468 aa9.51□□□□□ -0.89
IPCEF1-213ENST00000522590 GPATCH3Q96I76 525 aa9.51□□□□□ -0.89
IPCEF1-213ENST00000522590 SCYL1Q96KG9 808 aa9.51□□□□□ -0.89
IPCEF1-213ENST00000522590 TOPAZ1Q8N9V7 1692 aa9.5□□□□□ -0.89
IPCEF1-213ENST00000522590 PABPN1LA6NDY0 278 aaKnown RBP9.5□□□□□ -0.89
IPCEF1-213ENST00000522590 GCP02774 474 aa9.5□□□□□ -0.89
IPCEF1-213ENST00000522590 TMC6Q7Z403 805 aa9.5□□□□□ -0.89
IPCEF1-213ENST00000522590 MAB21L3Q8N8X9 362 aa9.5□□□□□ -0.89
IPCEF1-213ENST00000522590 NUP133Q8WUM0 1156 aa9.5□□□□□ -0.89
IPCEF1-213ENST00000522590 SPIRE2Q8WWL2 714 aa9.5□□□□□ -0.89
IPCEF1-213ENST00000522590 NUDT16Q96DE0 195 aaKnown RBP9.5□□□□□ -0.89
IPCEF1-213ENST00000522590 RBM41Q96IZ5 413 aaKnown RBP9.5□□□□□ -0.89
IPCEF1-213ENST00000522590 NEUROD6Q96NK8 337 aa9.5□□□□□ -0.89
IPCEF1-213ENST00000522590 OSBPL9Q96SU4 736 aa9.5□□□□□ -0.89
IPCEF1-213ENST00000522590 MUC3BQ9H195 1237 aa9.5□□□□□ -0.89
IPCEF1-213ENST00000522590 PRKRIP1Q9H875 184 aaPredicted RBP9.5□□□□□ -0.89
IPCEF1-213ENST00000522590 ADCY9O60503 1353 aa9.5□□□□□ -0.89
IPCEF1-213ENST00000522590 NPHP1O15259 732 aa9.5□□□□□ -0.89
IPCEF1-213ENST00000522590 GCLCP48506 637 aaPredicted RBP9.5□□□□□ -0.89
IPCEF1-213ENST00000522590 LMAN1P49257 510 aa9.5□□□□□ -0.89
IPCEF1-213ENST00000522590 TSR1Q2NL82 804 aaKnown RBP9.5□□□□□ -0.89
IPCEF1-213ENST00000522590 GNPTABQ3T906 1256 aa9.5□□□□□ -0.89
IPCEF1-213ENST00000522590 PLEKHO1Q53GL0 409 aaPredicted RBP9.5□□□□□ -0.89
IPCEF1-213ENST00000522590 SMUG1Q53HV7 270 aa9.5□□□□□ -0.89
IPCEF1-213ENST00000522590 SLC30A9Q6PML9 568 aa9.5□□□□□ -0.89
IPCEF1-213ENST00000522590 MTHFD1LQ6UB35 978 aa9.5□□□□□ -0.89
IPCEF1-213ENST00000522590 CEP57L1Q8IYX8 460 aa9.5□□□□□ -0.89
IPCEF1-213ENST00000522590 C17orf53Q8N3J3 647 aaPredicted RBP9.5□□□□□ -0.89
IPCEF1-213ENST00000522590 ZKSCAN4Q969J2 545 aaPredicted RBP9.5□□□□□ -0.89
IPCEF1-213ENST00000522590 CABS1Q96KC9 395 aa9.5□□□□□ -0.89
IPCEF1-213ENST00000522590 ZNF510Q9Y2H8 683 aa9.5□□□□□ -0.89
IPCEF1-213ENST00000522590 FAN1Q9Y2M0 1017 aa9.5□□□□□ -0.89
IPCEF1-213ENST00000522590 COL24A1Q17RW2 1714 aa9.49□□□□□ -0.89
IPCEF1-213ENST00000522590 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.49□□□□□ -0.89
IPCEF1-213ENST00000522590 RPSAP08865 295 aaKnown RBP9.49□□□□□ -0.89
IPCEF1-213ENST00000522590 YBX3P16989 372 aaKnown RBP eCLIP9.49□□□□□ -0.89
IPCEF1-213ENST00000522590 TRIM29Q14134 588 aa9.49□□□□□ -0.89
IPCEF1-213ENST00000522590 ISM2Q6H9L7 571 aa9.49□□□□□ -0.89
IPCEF1-213ENST00000522590 NLGN2Q8NFZ4 835 aa9.49□□□□□ -0.89
IPCEF1-213ENST00000522590 ZC3H15Q8WU90 426 aaKnown RBP9.49□□□□□ -0.89
IPCEF1-213ENST00000522590 SPDL1Q96EA4 605 aa9.49□□□□□ -0.89
IPCEF1-213ENST00000522590 CDK5RAP3Q96JB5 506 aa9.49□□□□□ -0.89
IPCEF1-213ENST00000522590 ALS2CR12Q96Q35 445 aa9.49□□□□□ -0.89
IPCEF1-213ENST00000522590 OSBPL10Q9BXB5 764 aa9.49□□□□□ -0.89
IPCEF1-213ENST00000522590 PARD6BQ9BYG5 372 aa9.49□□□□□ -0.89
IPCEF1-213ENST00000522590 TUBA8Q9NY65 449 aaPredicted RBP9.49□□□□□ -0.89
IPCEF1-213ENST00000522590 ITGB1BP2Q9UKP3 347 aa9.49□□□□□ -0.89
IPCEF1-213ENST00000522590 SPO11Q9Y5K1 396 aa9.49□□□□□ -0.89
IPCEF1-213ENST00000522590 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.49□□□□□ -0.89
IPCEF1-213ENST00000522590 TMEM221A6NGB7 291 aa9.48□□□□□ -0.89
IPCEF1-213ENST00000522590 ROR2Q01974 943 aaKnown RBP9.48□□□□□ -0.89
IPCEF1-213ENST00000522590 NAA30Q147X3 362 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms