RNA–Protein interactions for RNA: ENST00000522468.1

HMBOX1-209, Transcript of homeobox containing 1, humanhuman

TSL 3

Gene HMBOX1, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-209ENST00000522468 ADGRA1Q86SQ6 560 aa17.3■□□□□ 0.36
HMBOX1-209ENST00000522468 SH3RF3Q8TEJ3 882 aaPredicted RBP17.3■□□□□ 0.36
HMBOX1-209ENST00000522468 C1orf115Q9H7X2 142 aa17.3■□□□□ 0.36
HMBOX1-209ENST00000522468 TRIM75PA6NK02 468 aa17.29■□□□□ 0.36
HMBOX1-209ENST00000522468 HOXD10P28358 340 aa17.29■□□□□ 0.36
HMBOX1-209ENST00000522468 GRK4P32298 578 aa17.29■□□□□ 0.36
HMBOX1-209ENST00000522468 HNRNPUQ00839 825 aaKnown RBP eCLIP17.29■□□□□ 0.36
HMBOX1-209ENST00000522468 PRKCZQ05513 592 aa17.29■□□□□ 0.36
HMBOX1-209ENST00000522468 GADL1Q6ZQY3 521 aa17.29■□□□□ 0.36
HMBOX1-209ENST00000522468 TEX11Q8IYF3 940 aa17.29■□□□□ 0.36
HMBOX1-209ENST00000522468 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.29■□□□□ 0.367e-7■□□□□ 11.3
HMBOX1-209ENST00000522468 SNRKQ9NRH2 765 aa17.29■□□□□ 0.36
HMBOX1-209ENST00000522468 LRP2BPQ9P2M1 347 aa17.29■□□□□ 0.36
HMBOX1-209ENST00000522468 DBNLQ9UJU6 430 aaKnown RBP17.29■□□□□ 0.36
HMBOX1-209ENST00000522468 AGTPBP1Q9UPW5 1226 aa17.29■□□□□ 0.36
HMBOX1-209ENST00000522468 SURF6O75683 361 aaKnown RBP17.28■□□□□ 0.36
HMBOX1-209ENST00000522468 CAP2P40123 477 aa17.28■□□□□ 0.36
HMBOX1-209ENST00000522468 FCGRTP55899 365 aa17.28■□□□□ 0.36
HMBOX1-209ENST00000522468 TREML2Q5T2D2 321 aa17.28■□□□□ 0.36
HMBOX1-209ENST00000522468 METTL16Q86W50 562 aaKnown RBP17.28■□□□□ 0.36
HMBOX1-209ENST00000522468 GCC1Q96CN9 775 aa17.28■□□□□ 0.36
HMBOX1-209ENST00000522468 HERC5Q9UII4 1024 aaKnown RBP17.28■□□□□ 0.36
HMBOX1-209ENST00000522468 GABRQQ9UN88 632 aa17.28■□□□□ 0.36
HMBOX1-209ENST00000522468 IGSF3O75054 1194 aa17.27■□□□□ 0.36
HMBOX1-209ENST00000522468 CCDC158Q5M9N0 1113 aa17.27■□□□□ 0.36
HMBOX1-209ENST00000522468 TTC39AQ5SRH9 613 aa17.27■□□□□ 0.36
HMBOX1-209ENST00000522468 NAA16Q6N069 864 aaPredicted RBP17.27■□□□□ 0.36
HMBOX1-209ENST00000522468 UBE2Q1Q7Z7E8 422 aa17.27■□□□□ 0.36
HMBOX1-209ENST00000522468 PROCA1Q8NCQ7 364 aaPredicted RBP17.27■□□□□ 0.36
HMBOX1-209ENST00000522468 RAET1EQ8TD07 263 aa17.27■□□□□ 0.36
HMBOX1-209ENST00000522468 DNAJC18Q9H819 358 aa17.27■□□□□ 0.36
HMBOX1-209ENST00000522468 AATFQ9NY61 560 aaKnown RBP eCLIP17.27■□□□□ 0.36
HMBOX1-209ENST00000522468 TLR7Q9NYK1 1049 aaKnown RBP17.27■□□□□ 0.36
HMBOX1-209ENST00000522468 PCDH10Q9P2E7 1040 aa17.27■□□□□ 0.36
HMBOX1-209ENST00000522468 SPP2Q13103 211 aa17.26■□□□□ 0.35
HMBOX1-209ENST00000522468 ZNF280CQ8ND82 737 aa17.26■□□□□ 0.35
HMBOX1-209ENST00000522468 EAF2Q96CJ1 260 aaPredicted RBP17.26■□□□□ 0.35
HMBOX1-209ENST00000522468 TBC1D2Q9BYX2 928 aa17.26■□□□□ 0.35
HMBOX1-209ENST00000522468 DHX36Q9H2U1 1008 aaKnown RBP17.26■□□□□ 0.35
HMBOX1-209ENST00000522468 PIH1D3Q9NQM4 214 aaKnown RBP17.26■□□□□ 0.35
HMBOX1-209ENST00000522468 PI4KBQ9UBF8 816 aa17.26■□□□□ 0.35
HMBOX1-209ENST00000522468 TRIOBPQ9H2D6 2365 aa17.26■□□□□ 0.35
HMBOX1-209ENST00000522468 MYH1P12882 1939 aa17.25■□□□□ 0.35
HMBOX1-209ENST00000522468 FLT1P17948 1338 aa17.25■□□□□ 0.35
HMBOX1-209ENST00000522468 BAG3O95817 575 aa17.25■□□□□ 0.35
HMBOX1-209ENST00000522468 GJB1P08034 283 aa17.25■□□□□ 0.35
HMBOX1-209ENST00000522468 CCL5P13501 91 aa17.25■□□□□ 0.35
HMBOX1-209ENST00000522468 ZAP70P43403 619 aa17.25■□□□□ 0.35
HMBOX1-209ENST00000522468 JAG1P78504 1218 aa17.25■□□□□ 0.35
HMBOX1-209ENST00000522468 OS9Q13438 667 aaPredicted RBP17.25■□□□□ 0.35
HMBOX1-209ENST00000522468 SH3D19Q5HYK7 790 aa17.25■□□□□ 0.35
HMBOX1-209ENST00000522468 HABP4Q5JVS0 413 aaKnown RBP17.25■□□□□ 0.35
HMBOX1-209ENST00000522468 CEP85Q6P2H3 762 aa17.25■□□□□ 0.35
HMBOX1-209ENST00000522468 ITPRIPQ8IWB1 547 aa17.25■□□□□ 0.35
HMBOX1-209ENST00000522468 FTSJ3Q8IY81 847 aaKnown RBP17.25■□□□□ 0.35
HMBOX1-209ENST00000522468 SLAIN1Q8ND83 568 aa17.25■□□□□ 0.35
HMBOX1-209ENST00000522468 PLXNB2O15031 1838 aa17.25■□□□□ 0.35
HMBOX1-209ENST00000522468 PLCG2P16885 1265 aa17.24■□□□□ 0.35
HMBOX1-209ENST00000522468 GJA8P48165 433 aa17.24■□□□□ 0.35
HMBOX1-209ENST00000522468 FLT3LGP49771 235 aa17.24■□□□□ 0.35
HMBOX1-209ENST00000522468 IRF5Q13568 498 aa17.24■□□□□ 0.35
HMBOX1-209ENST00000522468 FAM110CQ1W6H9 321 aa17.24■□□□□ 0.35
HMBOX1-209ENST00000522468 SMCR8Q8TEV9 937 aaPredicted RBP17.24■□□□□ 0.35
HMBOX1-209ENST00000522468 WDR18Q9BV38 432 aa17.24■□□□□ 0.35
HMBOX1-209ENST00000522468 DDX60LQ5H9U9 1706 aaKnown RBP17.24■□□□□ 0.35
HMBOX1-209ENST00000522468 ZBED9Q6R2W3 1325 aa17.23■□□□□ 0.35
HMBOX1-209ENST00000522468 USP17L5A8MUK1 530 aa17.23■□□□□ 0.35
HMBOX1-209ENST00000522468 HMGCS2P54868 508 aa17.23■□□□□ 0.35
HMBOX1-209ENST00000522468 MAPKAPK5Q8IW41 473 aa17.23■□□□□ 0.35
HMBOX1-209ENST00000522468 ANKRD13CQ8N6S4 541 aa17.23■□□□□ 0.35
HMBOX1-209ENST00000522468 PXYLP1Q8TE99 480 aa17.23■□□□□ 0.35
HMBOX1-209ENST00000522468 TGFBRAP1Q8WUH2 860 aa17.23■□□□□ 0.35
HMBOX1-209ENST00000522468 NOL10Q9BSC4 688 aaKnown RBP17.23■□□□□ 0.35
HMBOX1-209ENST00000522468 CCDC8Q9H0W5 538 aaPredicted RBP17.23■□□□□ 0.35
HMBOX1-209ENST00000522468 PNMA3Q9UL41 463 aa17.23■□□□□ 0.35
HMBOX1-209ENST00000522468 TNPO2O14787 897 aaKnown RBP17.22■□□□□ 0.35
HMBOX1-209ENST00000522468 ADCY3O60266 1144 aa17.22■□□□□ 0.35
HMBOX1-209ENST00000522468 SHROOM1Q2M3G4 852 aaPredicted RBP17.22■□□□□ 0.35
HMBOX1-209ENST00000522468 NKX2-3Q8TAU0 364 aa17.22■□□□□ 0.35
HMBOX1-209ENST00000522468 ELNP15502 786 aa17.21■□□□□ 0.35
HMBOX1-209ENST00000522468 GCLCP48506 637 aaPredicted RBP17.21■□□□□ 0.35
HMBOX1-209ENST00000522468 DYNLL1P63167 89 aaKnown RBP17.21■□□□□ 0.35
HMBOX1-209ENST00000522468 UBXN2AP68543 259 aa17.21■□□□□ 0.35
HMBOX1-209ENST00000522468 FOXP4Q8IVH2 680 aaPredicted RBP17.21■□□□□ 0.35
HMBOX1-209ENST00000522468 PANK1Q8TE04 598 aa17.21■□□□□ 0.35
HMBOX1-209ENST00000522468 RNF208Q9H0X6 261 aa17.21■□□□□ 0.35
HMBOX1-209ENST00000522468 UNC93B1Q9H1C4 597 aa17.21■□□□□ 0.35
HMBOX1-209ENST00000522468 ASCC2Q9H1I8 757 aaPredicted RBP17.21■□□□□ 0.35
HMBOX1-209ENST00000522468 PALD1Q9ULE6 856 aa17.21■□□□□ 0.35
HMBOX1-209ENST00000522468 LAMA3Q16787 3333 aa17.21■□□□□ 0.34
HMBOX1-209ENST00000522468 ASNSP08243 561 aa17.2■□□□□ 0.34
HMBOX1-209ENST00000522468 BACE1P56817 501 aa17.2■□□□□ 0.34
HMBOX1-209ENST00000522468 U2AF1L4Q8WU68 220 aaKnown RBP17.2■□□□□ 0.34
HMBOX1-209ENST00000522468 AS3MTQ9HBK9 375 aa17.2■□□□□ 0.34
HMBOX1-209ENST00000522468 GINM1Q9NU53 330 aa17.2■□□□□ 0.34
HMBOX1-209ENST00000522468 NDUFB9Q9Y6M9 179 aa17.2■□□□□ 0.34
HMBOX1-209ENST00000522468 H0YGN5 161 aa17.19■□□□□ 0.34
HMBOX1-209ENST00000522468 INHAP05111 366 aa17.19■□□□□ 0.34
HMBOX1-209ENST00000522468 CYP7A1P22680 504 aa17.19■□□□□ 0.34
HMBOX1-209ENST00000522468 HOXA7P31268 230 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms