RNA–Protein interactions for RNA: ENST00000522246.5

CD74-208, Transcript of CD74 molecule, humanhuman

TSL 4

Gene CD74, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD74-208ENST00000522246 ZSWIM5Q9P217 1185 aa12.5□□□□□ -0.41
CD74-208ENST00000522246 SAP30BPQ9UHR5 308 aaKnown RBP12.5□□□□□ -0.41
CD74-208ENST00000522246 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.5□□□□□ -0.41
CD74-208ENST00000522246 ROBO3Q96MS0 1386 aa12.5□□□□□ -0.41
CD74-208ENST00000522246 FOCADQ5VW36 1801 aa12.5□□□□□ -0.41
CD74-208ENST00000522246 ECM29Q5VYK3 1845 aa12.5□□□□□ -0.41
CD74-208ENST00000522246 CDK5RAP2Q96SN8 1893 aa12.5□□□□□ -0.41
CD74-208ENST00000522246 COL2A1P02458 1487 aaPredicted RBP12.49□□□□□ -0.41
CD74-208ENST00000522246 CYP2D7A0A087X1C5 515 aa12.49□□□□□ -0.41
CD74-208ENST00000522246 B4E1Z4 1266 aa12.49□□□□□ -0.41
CD74-208ENST00000522246 KDM4AO75164 1064 aa12.49□□□□□ -0.41
CD74-208ENST00000522246 CYP2D6P10635 497 aa12.49□□□□□ -0.41
CD74-208ENST00000522246 PLCD1P51178 756 aa12.49□□□□□ -0.41
CD74-208ENST00000522246 NFIAQ12857 509 aa12.49□□□□□ -0.41
CD74-208ENST00000522246 RRP12Q5JTH9 1297 aaKnown RBP12.49□□□□□ -0.41
CD74-208ENST00000522246 PPP4R3BQ5MIZ7 849 aa12.49□□□□□ -0.41
CD74-208ENST00000522246 ZSCAN29Q8IWY8 852 aaPredicted RBP12.49□□□□□ -0.41
CD74-208ENST00000522246 TRIM34Q9BYJ4 488 aa12.49□□□□□ -0.41
CD74-208ENST00000522246 DDX4Q9NQI0 724 aaKnown RBP12.49□□□□□ -0.41
CD74-208ENST00000522246 FAM198AQ9UFP1 575 aa12.49□□□□□ -0.41
CD74-208ENST00000522246 SERPINB13Q9UIV8 391 aa12.49□□□□□ -0.41
CD74-208ENST00000522246 GOLGB1Q14789 3259 aaKnown RBP12.49□□□□□ -0.41
CD74-208ENST00000522246 NAV1Q8NEY1 1877 aa12.48□□□□□ -0.41
CD74-208ENST00000522246 ATRNL1Q5VV63 1379 aa12.48□□□□□ -0.41
CD74-208ENST00000522246 RANBP6O60518 1105 aaKnown RBP12.48□□□□□ -0.41
CD74-208ENST00000522246 HSP90AA1P07900 732 aaKnown RBP12.48□□□□□ -0.41
CD74-208ENST00000522246 CPA1P15085 419 aa12.48□□□□□ -0.41
CD74-208ENST00000522246 LIFRP42702 1097 aa12.48□□□□□ -0.41
CD74-208ENST00000522246 CDK8P49336 464 aa12.48□□□□□ -0.41
CD74-208ENST00000522246 EVCP57679 992 aa12.48□□□□□ -0.41
CD74-208ENST00000522246 KIF4BQ2VIQ3 1234 aa12.48□□□□□ -0.41
CD74-208ENST00000522246 NBPF9Q3BBW0 867 aa12.48□□□□□ -0.41
CD74-208ENST00000522246 RBM26Q5T8P6 1007 aaKnown RBP12.48□□□□□ -0.41
CD74-208ENST00000522246 ZNF274Q96GC6 653 aaPredicted RBP12.48□□□□□ -0.41
CD74-208ENST00000522246 L3MBTL3Q96JM7 780 aaPredicted RBP12.48□□□□□ -0.41
CD74-208ENST00000522246 UBAC1Q9BSL1 405 aa12.48□□□□□ -0.41
CD74-208ENST00000522246 VEZTQ9HBM0 779 aa12.48□□□□□ -0.41
CD74-208ENST00000522246 ADARB2Q9NS39 739 aaKnown RBP12.48□□□□□ -0.41
CD74-208ENST00000522246 TCP11L1Q9NUJ3 509 aa12.48□□□□□ -0.41
CD74-208ENST00000522246 ANGEL1Q9UNK9 670 aaKnown RBP12.48□□□□□ -0.41
CD74-208ENST00000522246 PCDHAC2Q9Y5I4 1007 aa12.48□□□□□ -0.41
CD74-208ENST00000522246 TIAM2Q8IVF5 1701 aa12.48□□□□□ -0.41
CD74-208ENST00000522246 NEDD4P46934 1319 aa12.47□□□□□ -0.41
CD74-208ENST00000522246 GLTPD2A6NH11 291 aa12.47□□□□□ -0.41
CD74-208ENST00000522246 IFIT3O14879 490 aaKnown RBP12.47□□□□□ -0.41
CD74-208ENST00000522246 DDNO94850 711 aaPredicted RBP12.47□□□□□ -0.41
CD74-208ENST00000522246 GABPAQ06546 454 aa12.47□□□□□ -0.41
CD74-208ENST00000522246 TCP10Q12799 353 aa12.47□□□□□ -0.41
CD74-208ENST00000522246 TOB2Q14106 344 aaPredicted RBP12.47□□□□□ -0.41
CD74-208ENST00000522246 TBC1D10BQ4KMP7 808 aaPredicted RBP12.47□□□□□ -0.41
CD74-208ENST00000522246 TMEM67Q5HYA8 995 aa12.47□□□□□ -0.41
CD74-208ENST00000522246 SYNE3Q6ZMZ3 975 aa12.47□□□□□ -0.41
CD74-208ENST00000522246 SAMD7Q7Z3H4 446 aa12.47□□□□□ -0.41
CD74-208ENST00000522246 METTL16Q86W50 562 aaKnown RBP12.47□□□□□ -0.41
CD74-208ENST00000522246 APOBEC3FQ8IUX4 373 aaKnown RBP12.47□□□□□ -0.41
CD74-208ENST00000522246 CRACR2BQ8N4Y2 399 aaPredicted RBP12.47□□□□□ -0.41
CD74-208ENST00000522246 HOOK2Q96ED9 719 aa12.47□□□□□ -0.41
CD74-208ENST00000522246 INTS4Q96HW7 963 aaKnown RBP12.47□□□□□ -0.41
CD74-208ENST00000522246 TMX3Q96JJ7 454 aa12.47□□□□□ -0.41
CD74-208ENST00000522246 CCDC17Q96LX7 622 aa12.47□□□□□ -0.41
CD74-208ENST00000522246 INCENPQ9NQS7 918 aa12.47□□□□□ -0.41
CD74-208ENST00000522246 HERC5Q9UII4 1024 aaKnown RBP12.47□□□□□ -0.41
CD74-208ENST00000522246 LAMB1P07942 1786 aa12.46□□□□□ -0.41
CD74-208ENST00000522246 CLRN2A0PK11 232 aa12.46□□□□□ -0.41
CD74-208ENST00000522246 IQCA1LA6NCM1 817 aa12.46□□□□□ -0.41
CD74-208ENST00000522246 TSPY2A6NKD2 308 aa12.46□□□□□ -0.41
CD74-208ENST00000522246 TCP10L2B9ZVM9 353 aa12.46□□□□□ -0.41
CD74-208ENST00000522246 TBC1D12O60347 775 aa12.46□□□□□ -0.41
CD74-208ENST00000522246 CD2BP2O95400 341 aaKnown RBP12.46□□□□□ -0.41
CD74-208ENST00000522246 TSPY3P0CV98 308 aa12.46□□□□□ -0.41
CD74-208ENST00000522246 TSPY8P0CW00 308 aa12.46□□□□□ -0.41
CD74-208ENST00000522246 CACNB3P54284 484 aa12.46□□□□□ -0.41
CD74-208ENST00000522246 ANTXR2P58335 489 aa12.46□□□□□ -0.41
CD74-208ENST00000522246 TFAP4Q01664 338 aa12.46□□□□□ -0.41
CD74-208ENST00000522246 CUL4AQ13619 759 aa12.46□□□□□ -0.41
CD74-208ENST00000522246 WTAPQ15007 396 aa12.46□□□□□ -0.41
CD74-208ENST00000522246 PPP2R5BQ15173 497 aa12.46□□□□□ -0.41
CD74-208ENST00000522246 CYB5R4Q7L1T6 521 aa12.46□□□□□ -0.41
CD74-208ENST00000522246 SGMS1Q86VZ5 419 aa12.46□□□□□ -0.41
CD74-208ENST00000522246 DGKHQ86XP1 1220 aa12.46□□□□□ -0.41
CD74-208ENST00000522246 STK11IPQ8N1F8 1099 aa12.46□□□□□ -0.41
CD74-208ENST00000522246 NEDD1Q8NHV4 660 aa12.46□□□□□ -0.41
CD74-208ENST00000522246 IGDCC4Q8TDY8 1250 aa12.46□□□□□ -0.41
CD74-208ENST00000522246 BRF1Q92994 677 aa12.46□□□□□ -0.41
CD74-208ENST00000522246 DYNLL2Q96FJ2 89 aa12.46□□□□□ -0.41
CD74-208ENST00000522246 ZSCAN10Q96SZ4 725 aaPredicted RBP12.46□□□□□ -0.41
CD74-208ENST00000522246 CWC22Q9HCG8 908 aaKnown RBP12.46□□□□□ -0.41
CD74-208ENST00000522246 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.46□□□□□ -0.41
CD74-208ENST00000522246 PPP2R3BQ9Y5P8 575 aa12.46□□□□□ -0.41
CD74-208ENST00000522246 TACC3Q9Y6A5 838 aa12.46□□□□□ -0.41
CD74-208ENST00000522246 DDTLA6NHG4 134 aaPredicted RBP12.45□□□□□ -0.42
CD74-208ENST00000522246 CCDC69A6NI79 296 aa12.45□□□□□ -0.42
CD74-208ENST00000522246 SH2B2O14492 632 aaPredicted RBP12.45□□□□□ -0.42
CD74-208ENST00000522246 DHX16O60231 1041 aaKnown RBP12.45□□□□□ -0.42
CD74-208ENST00000522246 PRDM1O75626 825 aa12.45□□□□□ -0.42
CD74-208ENST00000522246 EPS15P42566 896 aa12.45□□□□□ -0.42
CD74-208ENST00000522246 RCAN1P53805 252 aa12.45□□□□□ -0.42
CD74-208ENST00000522246 NFXL1Q6ZNB6 911 aa12.45□□□□□ -0.42
CD74-208ENST00000522246 USP50Q70EL3 339 aaPredicted RBP12.45□□□□□ -0.42
CD74-208ENST00000522246 CHST3Q7LGC8 479 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms