RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 MINDY4BA8MYZ0 360 aa15.46■□□□□ 0.07
CPNE3-205ENST00000522240 H7C1D1 291 aa15.46■□□□□ 0.07
CPNE3-205ENST00000522240 WNT10BO00744 389 aa15.46■□□□□ 0.07
CPNE3-205ENST00000522240 FGRP09769 529 aa15.46■□□□□ 0.07
CPNE3-205ENST00000522240 RPS6KB1P23443 525 aa15.46■□□□□ 0.07
CPNE3-205ENST00000522240 PICALMQ13492 652 aa15.46■□□□□ 0.07
CPNE3-205ENST00000522240 RUFY3Q7L099 469 aa15.46■□□□□ 0.07
CPNE3-205ENST00000522240 NCOA7Q8NI08 942 aa15.46■□□□□ 0.07
CPNE3-205ENST00000522240 L3MBTL3Q96JM7 780 aaPredicted RBP15.46■□□□□ 0.07
CPNE3-205ENST00000522240 TTC14Q96N46 770 aa15.46■□□□□ 0.07
CPNE3-205ENST00000522240 UPF3BQ9BZI7 483 aaKnown RBP15.46■□□□□ 0.07
CPNE3-205ENST00000522240 TDRD3Q9H7E2 651 aaKnown RBP15.46■□□□□ 0.07
CPNE3-205ENST00000522240 ZNF70Q9UC06 446 aaPredicted RBP15.46■□□□□ 0.07
CPNE3-205ENST00000522240 FAM198AQ9UFP1 575 aa15.46■□□□□ 0.07
CPNE3-205ENST00000522240 NEDD4P46934 1319 aa15.45■□□□□ 0.06
CPNE3-205ENST00000522240 SIPA1L1O43166 1804 aa15.45■□□□□ 0.06
CPNE3-205ENST00000522240 POLR3DP05423 398 aaPredicted RBP15.45■□□□□ 0.06
CPNE3-205ENST00000522240 MCM2P49736 904 aa15.45■□□□□ 0.06
CPNE3-205ENST00000522240 NEK4P51957 841 aa15.45■□□□□ 0.06
CPNE3-205ENST00000522240 CTDSPL2Q05D32 466 aa15.45■□□□□ 0.06
CPNE3-205ENST00000522240 NFIAQ12857 509 aa15.45■□□□□ 0.06
CPNE3-205ENST00000522240 BECN1Q14457 450 aa15.45■□□□□ 0.06
CPNE3-205ENST00000522240 KIF4BQ2VIQ3 1234 aa15.45■□□□□ 0.06
CPNE3-205ENST00000522240 MFSD6Q6ZSS7 791 aa15.45■□□□□ 0.06
CPNE3-205ENST00000522240 TTC6Q86TZ1 520 aa15.45■□□□□ 0.06
CPNE3-205ENST00000522240 MB21D2Q8IYB1 491 aaPredicted RBP15.45■□□□□ 0.06
CPNE3-205ENST00000522240 FAM212AQ96EL1 285 aa15.45■□□□□ 0.06
CPNE3-205ENST00000522240 KRT23Q9C075 422 aa15.45■□□□□ 0.06
CPNE3-205ENST00000522240 ALDH8A1Q9H2A2 487 aaPredicted RBP15.45■□□□□ 0.06
CPNE3-205ENST00000522240 DHX36Q9H2U1 1008 aaKnown RBP15.45■□□□□ 0.06
CPNE3-205ENST00000522240 NMRK2Q9NPI5 230 aa15.45■□□□□ 0.06
CPNE3-205ENST00000522240 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.45■□□□□ 0.06
CPNE3-205ENST00000522240 WDR90Q96KV7 1748 aa15.45■□□□□ 0.06
CPNE3-205ENST00000522240 CYP2D7A0A087X1C5 515 aa15.44■□□□□ 0.06
CPNE3-205ENST00000522240 SHTN1A0MZ66 631 aa15.44■□□□□ 0.06
CPNE3-205ENST00000522240 ORC4O43929 436 aa15.44■□□□□ 0.06
CPNE3-205ENST00000522240 HLA-DOAP06340 250 aa15.44■□□□□ 0.06
CPNE3-205ENST00000522240 CYP2D6P10635 497 aa15.44■□□□□ 0.06
CPNE3-205ENST00000522240 LMOD1P29536 600 aaPredicted RBP15.44■□□□□ 0.06
CPNE3-205ENST00000522240 FSTL1Q12841 308 aa15.44■□□□□ 0.06
CPNE3-205ENST00000522240 DPY19L2Q6NUT2 758 aa15.44■□□□□ 0.06
CPNE3-205ENST00000522240 DHX32Q7L7V1 743 aaKnown RBP15.44■□□□□ 0.06
CPNE3-205ENST00000522240 FAM83AQ86UY5 434 aa15.44■□□□□ 0.06
CPNE3-205ENST00000522240 HSCBQ8IWL3 235 aa15.44■□□□□ 0.06
CPNE3-205ENST00000522240 HS6ST3Q8IZP7 471 aa15.44■□□□□ 0.06
CPNE3-205ENST00000522240 EHD4Q9H223 541 aa15.44■□□□□ 0.06
CPNE3-205ENST00000522240 ZNF287Q9HBT7 754 aa15.44■□□□□ 0.06
CPNE3-205ENST00000522240 SAP30BPQ9UHR5 308 aaKnown RBP15.44■□□□□ 0.06
CPNE3-205ENST00000522240 SCN4AP35499 1836 aa15.44■□□□□ 0.06
CPNE3-205ENST00000522240 DDNO94850 711 aaPredicted RBP15.43■□□□□ 0.06
CPNE3-205ENST00000522240 MCM5P33992 734 aa15.43■□□□□ 0.06
CPNE3-205ENST00000522240 CACNB3P54284 484 aa15.43■□□□□ 0.06
CPNE3-205ENST00000522240 PDE4BQ07343 736 aa15.43■□□□□ 0.06
CPNE3-205ENST00000522240 TNFAIP1Q13829 316 aa15.43■□□□□ 0.06
CPNE3-205ENST00000522240 ANKRD1Q15327 319 aa15.43■□□□□ 0.06
CPNE3-205ENST00000522240 C16orf86Q6ZW13 317 aa15.43■□□□□ 0.06
CPNE3-205ENST00000522240 FBXL16Q8N461 479 aa15.43■□□□□ 0.06
CPNE3-205ENST00000522240 FAM151AQ8WW52 585 aa15.43■□□□□ 0.06
CPNE3-205ENST00000522240 MTA3Q9BTC8 594 aa15.43■□□□□ 0.06
CPNE3-205ENST00000522240 ADARB2Q9NS39 739 aaKnown RBP15.43■□□□□ 0.06
CPNE3-205ENST00000522240 PDRG1Q9NUG6 133 aa15.43■□□□□ 0.06
CPNE3-205ENST00000522240 CNTNAP1P78357 1384 aa15.42■□□□□ 0.06
CPNE3-205ENST00000522240 CLRN2A0PK11 232 aa15.42■□□□□ 0.06
CPNE3-205ENST00000522240 GLTPD2A6NH11 291 aa15.42■□□□□ 0.06
CPNE3-205ENST00000522240 TNNI2P48788 182 aa15.42■□□□□ 0.06
CPNE3-205ENST00000522240 PLCD1P51178 756 aa15.42■□□□□ 0.06
CPNE3-205ENST00000522240 EXOSC10Q01780 885 aaKnown RBP15.42■□□□□ 0.06
CPNE3-205ENST00000522240 GABPAQ06546 454 aa15.42■□□□□ 0.06
CPNE3-205ENST00000522240 NBPF9Q3BBW0 867 aa15.42■□□□□ 0.06
CPNE3-205ENST00000522240 TBC1D10BQ4KMP7 808 aaPredicted RBP15.42■□□□□ 0.06
CPNE3-205ENST00000522240 ESR2Q92731 530 aa15.42■□□□□ 0.06
CPNE3-205ENST00000522240 AGXT2Q9BYV1 514 aa15.42■□□□□ 0.06
CPNE3-205ENST00000522240 SWAP70Q9UH65 585 aa15.42■□□□□ 0.06
CPNE3-205ENST00000522240 TACC3Q9Y6A5 838 aa15.42■□□□□ 0.06
CPNE3-205ENST00000522240 MYH8P13535 1937 aa15.42■□□□□ 0.06
CPNE3-205ENST00000522240 B4E1Z4 1266 aa15.41■□□□□ 0.06
CPNE3-205ENST00000522240 K7ELQ4 463 aaPredicted RBP15.41■□□□□ 0.06
CPNE3-205ENST00000522240 CD2BP2O95400 341 aaKnown RBP15.41■□□□□ 0.06
CPNE3-205ENST00000522240 EGFRP00533 1210 aa15.41■□□□□ 0.06
CPNE3-205ENST00000522240 CPA1P15085 419 aa15.41■□□□□ 0.06
CPNE3-205ENST00000522240 SAMD7Q7Z3H4 446 aa15.41■□□□□ 0.06
CPNE3-205ENST00000522240 TRPM4Q8TD43 1214 aa15.41■□□□□ 0.06
CPNE3-205ENST00000522240 TBC1D2Q9BYX2 928 aa15.41■□□□□ 0.06
CPNE3-205ENST00000522240 VEZTQ9HBM0 779 aa15.41■□□□□ 0.06
CPNE3-205ENST00000522240 PITPNM2Q9BZ72 1349 aa15.41■□□□□ 0.06
CPNE3-205ENST00000522240 PLIN4Q96Q06 1357 aa15.4■□□□□ 0.06
CPNE3-205ENST00000522240 TCP10L2B9ZVM9 353 aa15.4■□□□□ 0.06
CPNE3-205ENST00000522240 SMIM22K7EJ46 135 aa15.4■□□□□ 0.06
CPNE3-205ENST00000522240 PRC1O43663 620 aa15.4■□□□□ 0.06
CPNE3-205ENST00000522240 EPS15P42566 896 aa15.4■□□□□ 0.06
CPNE3-205ENST00000522240 MNX1P50219 401 aaPredicted RBP15.4■□□□□ 0.06
CPNE3-205ENST00000522240 AK2P54819 239 aa15.4■□□□□ 0.06
CPNE3-205ENST00000522240 ANTXR2P58335 489 aa15.4■□□□□ 0.06
CPNE3-205ENST00000522240 EVX2Q03828 476 aa15.4■□□□□ 0.06
CPNE3-205ENST00000522240 COL9A3Q14050 684 aaPredicted RBP15.4■□□□□ 0.06
CPNE3-205ENST00000522240 METTL16Q86W50 562 aaKnown RBP15.4■□□□□ 0.06
CPNE3-205ENST00000522240 APOBEC3FQ8IUX4 373 aaKnown RBP15.4■□□□□ 0.06
CPNE3-205ENST00000522240 RNF25Q96BH1 459 aaPredicted RBP15.4■□□□□ 0.06
CPNE3-205ENST00000522240 TMEM87BQ96K49 555 aa15.4■□□□□ 0.06
CPNE3-205ENST00000522240 IPO9Q96P70 1041 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms