RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 TRPM4Q8TD43 1214 aa17.81■□□□□ 0.44
SREK1-209ENST00000520953 DPF2Q92785 391 aa17.81■□□□□ 0.44
SREK1-209ENST00000520953 DDTLA6NHG4 134 aaPredicted RBP17.8■□□□□ 0.44
SREK1-209ENST00000520953 DHX32Q7L7V1 743 aaKnown RBP17.8■□□□□ 0.44
SREK1-209ENST00000520953 HSCBQ8IWL3 235 aa17.8■□□□□ 0.44
SREK1-209ENST00000520953 VEZTQ9HBM0 779 aa17.8■□□□□ 0.44
SREK1-209ENST00000520953 SPDYE2Q495Y8 402 aa17.8■□□□□ 0.44
SREK1-209ENST00000520953 RALYLQ86SE5 291 aaKnown RBP17.8■□□□□ 0.44
SREK1-209ENST00000520953 MTMR14Q8NCE2 650 aa17.8■□□□□ 0.44
SREK1-209ENST00000520953 ZKSCAN3Q9BRR0 538 aa17.8■□□□□ 0.44
SREK1-209ENST00000520953 IDI2Q9BXS1 227 aa17.8■□□□□ 0.44
SREK1-209ENST00000520953 SENP2Q9HC62 589 aa17.8■□□□□ 0.44
SREK1-209ENST00000520953 FOXD4L1Q9NU39 408 aa17.8■□□□□ 0.44
SREK1-209ENST00000520953 GPRC5DQ9NZD1 345 aa17.8■□□□□ 0.44
SREK1-209ENST00000520953 ZSWIM5Q9P217 1185 aa17.8■□□□□ 0.44
SREK1-209ENST00000520953 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.8■□□□□ 0.44
SREK1-209ENST00000520953 SIPA1L1O43166 1804 aa17.79■□□□□ 0.44
SREK1-209ENST00000520953 FAM196BA6NMK8 535 aa17.79■□□□□ 0.44
SREK1-209ENST00000520953 PRC1O43663 620 aa17.79■□□□□ 0.44
SREK1-209ENST00000520953 GRIN3BO60391 1043 aa17.79■□□□□ 0.44
SREK1-209ENST00000520953 DEKP35659 375 aaKnown RBP17.79■□□□□ 0.44
SREK1-209ENST00000520953 CNTNAP1P78357 1384 aa17.79■□□□□ 0.44
SREK1-209ENST00000520953 K7ELQ4 463 aaPredicted RBP17.79■□□□□ 0.44
SREK1-209ENST00000520953 FAM47AQ5JRC9 791 aa17.79■□□□□ 0.44
SREK1-209ENST00000520953 TRDNQ13061 729 aa17.78■□□□□ 0.44
SREK1-209ENST00000520953 TPCN1Q9ULQ1 816 aa17.78■□□□□ 0.44
SREK1-209ENST00000520953 ROBO3Q96MS0 1386 aa17.77■□□□□ 0.44
SREK1-209ENST00000520953 FGRP09769 529 aa17.77■□□□□ 0.44
SREK1-209ENST00000520953 HIRAP54198 1017 aaPredicted RBP17.77■□□□□ 0.44
SREK1-209ENST00000520953 KIF4BQ2VIQ3 1234 aa17.77■□□□□ 0.44
SREK1-209ENST00000520953 BRF1Q92994 677 aa17.77■□□□□ 0.44
SREK1-209ENST00000520953 TMX3Q96JJ7 454 aa17.77■□□□□ 0.44
SREK1-209ENST00000520953 RANBP6O60518 1105 aaKnown RBP17.77■□□□□ 0.43
SREK1-209ENST00000520953 NMT2O60551 498 aa17.77■□□□□ 0.43
SREK1-209ENST00000520953 MCM5P33992 734 aa17.77■□□□□ 0.43
SREK1-209ENST00000520953 TMEM39BQ9GZU3 492 aa17.77■□□□□ 0.43
SREK1-209ENST00000520953 APOBRQ0VD83 1088 aa17.76■□□□□ 0.43
SREK1-209ENST00000520953 DNAJC18Q9H819 358 aa17.76■□□□□ 0.43
SREK1-209ENST00000520953 HMGB1P09429 215 aaKnown RBP17.76■□□□□ 0.43
SREK1-209ENST00000520953 CDK8P49336 464 aa17.76■□□□□ 0.43
SREK1-209ENST00000520953 ST3GAL1Q11201 340 aa17.76■□□□□ 0.43
SREK1-209ENST00000520953 RAB11FIP4Q86YS3 637 aa17.76■□□□□ 0.43
SREK1-209ENST00000520953 ZSCAN29Q8IWY8 852 aaPredicted RBP17.76■□□□□ 0.43
SREK1-209ENST00000520953 RNF41Q9H4P4 317 aaPredicted RBP17.76■□□□□ 0.43
SREK1-209ENST00000520953 H7C1D1 291 aa17.75■□□□□ 0.43
SREK1-209ENST00000520953 GABPAQ06546 454 aa17.75■□□□□ 0.43
SREK1-209ENST00000520953 ME3Q16798 604 aa17.75■□□□□ 0.43
SREK1-209ENST00000520953 SHROOM1Q2M3G4 852 aaPredicted RBP17.75■□□□□ 0.43
SREK1-209ENST00000520953 C16orf86Q6ZW13 317 aa17.75■□□□□ 0.43
SREK1-209ENST00000520953 AMOTL1Q8IY63 956 aa17.75■□□□□ 0.43
SREK1-209ENST00000520953 NECAB1Q8N987 351 aa17.75■□□□□ 0.43
SREK1-209ENST00000520953 KRT23Q9C075 422 aa17.75■□□□□ 0.43
SREK1-209ENST00000520953 CNNM2Q9H8M5 875 aa17.75■□□□□ 0.43
SREK1-209ENST00000520953 FGD1P98174 961 aa17.74■□□□□ 0.43
SREK1-209ENST00000520953 TMOD2Q9NZR1 351 aa17.74■□□□□ 0.43
SREK1-209ENST00000520953 HACL1Q9UJ83 578 aa17.74■□□□□ 0.43
SREK1-209ENST00000520953 BRPF3Q9ULD4 1205 aa17.74■□□□□ 0.43
SREK1-209ENST00000520953 ORC4O43929 436 aa17.74■□□□□ 0.43
SREK1-209ENST00000520953 RASA1P20936 1047 aa17.74■□□□□ 0.43
SREK1-209ENST00000520953 STK3Q13188 491 aa17.74■□□□□ 0.43
SREK1-209ENST00000520953 IGDCC4Q8TDY8 1250 aa17.74■□□□□ 0.43
SREK1-209ENST00000520953 AGXT2Q9BYV1 514 aa17.74■□□□□ 0.43
SREK1-209ENST00000520953 SH2B2O14492 632 aaPredicted RBP17.73■□□□□ 0.43
SREK1-209ENST00000520953 ENTPD3O75355 529 aa17.73■□□□□ 0.43
SREK1-209ENST00000520953 SLC3A2P08195 630 aaKnown RBP17.73■□□□□ 0.43
SREK1-209ENST00000520953 PDE4BQ07343 736 aa17.73■□□□□ 0.43
SREK1-209ENST00000520953 TTC6Q86TZ1 520 aa17.73■□□□□ 0.43
SREK1-209ENST00000520953 ESR2Q92731 530 aa17.73■□□□□ 0.43
SREK1-209ENST00000520953 ALDH8A1Q9H2A2 487 aaPredicted RBP17.73■□□□□ 0.43
SREK1-209ENST00000520953 MKNK2Q9HBH9 465 aa17.73■□□□□ 0.43
SREK1-209ENST00000520953 LIMCH1Q9UPQ0 1083 aa17.73■□□□□ 0.43
SREK1-209ENST00000520953 MYO1BO43795 1136 aa17.73■□□□□ 0.43
SREK1-209ENST00000520953 NPM3O75607 178 aaKnown RBP17.73■□□□□ 0.43
SREK1-209ENST00000520953 SHMT1P34896 483 aa17.73■□□□□ 0.43
SREK1-209ENST00000520953 ANGEL2Q5VTE6 544 aaKnown RBP17.73■□□□□ 0.43
SREK1-209ENST00000520953 DLK2Q6UY11 383 aa17.73■□□□□ 0.43
SREK1-209ENST00000520953 PGAP2Q9UHJ9 254 aa17.73■□□□□ 0.43
SREK1-209ENST00000520953 SERPINB13Q9UIV8 391 aa17.73■□□□□ 0.43
SREK1-209ENST00000520953 IFIT3O14879 490 aaKnown RBP17.72■□□□□ 0.43
SREK1-209ENST00000520953 TFAP4Q01664 338 aa17.72■□□□□ 0.43
SREK1-209ENST00000520953 FAM151AQ8WW52 585 aa17.72■□□□□ 0.43
SREK1-209ENST00000520953 CSRNP1Q96S65 589 aa17.72■□□□□ 0.43
SREK1-209ENST00000520953 LY9Q9HBG7 655 aa17.72■□□□□ 0.43
SREK1-209ENST00000520953 ATRNL1Q5VV63 1379 aa17.72■□□□□ 0.43
SREK1-209ENST00000520953 RASA3Q14644 834 aa17.72■□□□□ 0.43
SREK1-209ENST00000520953 TMEM67Q5HYA8 995 aa17.72■□□□□ 0.43
SREK1-209ENST00000520953 PRAMEF18Q5VWM3 479 aa17.72■□□□□ 0.43
SREK1-209ENST00000520953 IL17RBQ9NRM6 502 aa17.72■□□□□ 0.43
SREK1-209ENST00000520953 NAP1L2Q9ULW6 460 aaPredicted RBP17.72■□□□□ 0.43
SREK1-209ENST00000520953 TNKSO95271 1327 aa17.71■□□□□ 0.43
SREK1-209ENST00000520953 HLA-DOAP06340 250 aa17.71■□□□□ 0.43
SREK1-209ENST00000520953 AKR1B1P15121 316 aa17.71■□□□□ 0.43
SREK1-209ENST00000520953 RXRAP19793 462 aa17.71■□□□□ 0.43
SREK1-209ENST00000520953 RRP1BQ14684 758 aaKnown RBP17.71■□□□□ 0.43
SREK1-209ENST00000520953 CLEC10AQ8IUN9 316 aa17.71■□□□□ 0.43
SREK1-209ENST00000520953 MYL10Q9BUA6 226 aa17.71■□□□□ 0.43
SREK1-209ENST00000520953 GGA3Q9NZ52 723 aa17.71■□□□□ 0.43
SREK1-209ENST00000520953 GLTPD2A6NH11 291 aa17.7■□□□□ 0.42
SREK1-209ENST00000520953 TSPY2A6NKD2 308 aa17.7■□□□□ 0.42
SREK1-209ENST00000520953 MCM2P49736 904 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms