RNA–Protein interactions for RNA: ENST00000520917.1

PTK2-226, Transcript of protein tyrosine kinase 2, humanhuman

TSL 4

Gene PTK2, Length 653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-226ENST00000520917 HMGCS2P54868 508 aa16.77■□□□□ 0.28
PTK2-226ENST00000520917 SMAD3P84022 425 aaKnown RBP16.77■□□□□ 0.28
PTK2-226ENST00000520917 CALD1Q05682 793 aaKnown RBP16.77■□□□□ 0.28
PTK2-226ENST00000520917 RALBP1Q15311 655 aa16.77■□□□□ 0.28
PTK2-226ENST00000520917 METTL24Q5JXM2 366 aa16.77■□□□□ 0.28
PTK2-226ENST00000520917 ZSCAN29Q8IWY8 852 aaPredicted RBP16.77■□□□□ 0.28
PTK2-226ENST00000520917 PPM1EQ8WY54 764 aa16.77■□□□□ 0.28
PTK2-226ENST00000520917 BADQ92934 168 aa16.77■□□□□ 0.28
PTK2-226ENST00000520917 TXNRD2Q9NNW7 524 aa16.77■□□□□ 0.28
PTK2-226ENST00000520917 ATP11BQ9Y2G3 1177 aa16.77■□□□□ 0.28
PTK2-226ENST00000520917 SUGT1Q9Y2Z0 365 aa16.77■□□□□ 0.28
PTK2-226ENST00000520917 PLXNA1Q9UIW2 1896 aa16.77■□□□□ 0.27
PTK2-226ENST00000520917 MYBBP1AQ9BQG0 1328 aaKnown RBP16.76■□□□□ 0.27
PTK2-226ENST00000520917 GRM8O00222 908 aa16.76■□□□□ 0.27
PTK2-226ENST00000520917 SPP2Q13103 211 aa16.76■□□□□ 0.27
PTK2-226ENST00000520917 KLHDC4Q8TBB5 520 aa16.76■□□□□ 0.27
PTK2-226ENST00000520917 ADAMTS19Q8TE59 1207 aa16.76■□□□□ 0.27
PTK2-226ENST00000520917 NUDT12Q9BQG2 462 aa16.76■□□□□ 0.27
PTK2-226ENST00000520917 CHMP4AQ9BY43 222 aa16.76■□□□□ 0.27
PTK2-226ENST00000520917 DDX4Q9NQI0 724 aaKnown RBP16.76■□□□□ 0.27
PTK2-226ENST00000520917 PRDM5Q9NQX1 630 aaPredicted RBP16.76■□□□□ 0.27
PTK2-226ENST00000520917 BDP1A6H8Y1 2624 aa16.76■□□□□ 0.27
PTK2-226ENST00000520917 CTNND1O60716 968 aaKnown RBP16.75■□□□□ 0.27
PTK2-226ENST00000520917 SH3RF1Q7Z6J0 888 aa16.75■□□□□ 0.27
PTK2-226ENST00000520917 PROCA1Q8NCQ7 364 aaPredicted RBP16.75■□□□□ 0.27
PTK2-226ENST00000520917 NECAB3Q96P71 396 aaPredicted RBP16.75■□□□□ 0.27
PTK2-226ENST00000520917 MORF4L1Q9UBU8 362 aa16.75■□□□□ 0.27
PTK2-226ENST00000520917 PRKAG2Q9UGJ0 569 aa16.75■□□□□ 0.27
PTK2-226ENST00000520917 MAP3K10Q02779 954 aa16.74■□□□□ 0.27
PTK2-226ENST00000520917 USP6NLQ92738 828 aa16.74■□□□□ 0.27
PTK2-226ENST00000520917 PORCNQ9H237 461 aa16.74■□□□□ 0.27
PTK2-226ENST00000520917 SIPA1L1O43166 1804 aa16.74■□□□□ 0.27
PTK2-226ENST00000520917 PDE8BO95263 885 aa16.73■□□□□ 0.27
PTK2-226ENST00000520917 XRCC5P13010 732 aaKnown RBP16.73■□□□□ 0.27
PTK2-226ENST00000520917 EPHB4P54760 987 aa16.73■□□□□ 0.27
PTK2-226ENST00000520917 PICALMQ13492 652 aa16.73■□□□□ 0.27
PTK2-226ENST00000520917 RRP1BQ14684 758 aaKnown RBP16.73■□□□□ 0.27
PTK2-226ENST00000520917 FLRT1Q9NZU1 646 aa16.73■□□□□ 0.27
PTK2-226ENST00000520917 GBF1Q92538 1859 aa16.72■□□□□ 0.27
PTK2-226ENST00000520917 FGFR2P21802 821 aa16.72■□□□□ 0.27
PTK2-226ENST00000520917 SOCS4Q8WXH5 440 aa16.72■□□□□ 0.27
PTK2-226ENST00000520917 UHRF1Q96T88 793 aaPredicted RBP16.72■□□□□ 0.27
PTK2-226ENST00000520917 TRIM43BA6NCK2 446 aa16.71■□□□□ 0.27
PTK2-226ENST00000520917 ENTPD3O75355 529 aa16.71■□□□□ 0.27
PTK2-226ENST00000520917 Q3C1V9 767 aa16.71■□□□□ 0.27
PTK2-226ENST00000520917 TRIM60Q495X7 471 aa16.71■□□□□ 0.27
PTK2-226ENST00000520917 MORN1Q5T089 497 aa16.71■□□□□ 0.27
PTK2-226ENST00000520917 POTEEQ6S8J3 1075 aa16.71■□□□□ 0.27
PTK2-226ENST00000520917 WDR66Q8TBY9 1149 aa16.71■□□□□ 0.27
PTK2-226ENST00000520917 TRIM43Q96BQ3 446 aaPredicted RBP16.71■□□□□ 0.27
PTK2-226ENST00000520917 ASB2Q96Q27 587 aa16.71■□□□□ 0.27
PTK2-226ENST00000520917 P2RX7Q99572 595 aaKnown RBP16.71■□□□□ 0.27
PTK2-226ENST00000520917 IDI2Q9BXS1 227 aa16.71■□□□□ 0.27
PTK2-226ENST00000520917 PDLIM7Q9NR12 457 aa16.71■□□□□ 0.27
PTK2-226ENST00000520917 C9orf78Q9NZ63 289 aaPredicted RBP16.71■□□□□ 0.27
PTK2-226ENST00000520917 NDUFB9Q9Y6M9 179 aa16.71■□□□□ 0.27
PTK2-226ENST00000520917 LDHBP07195 334 aaKnown RBP16.7■□□□□ 0.26
PTK2-226ENST00000520917 ITGB8P26012 769 aa16.7■□□□□ 0.26
PTK2-226ENST00000520917 PDE3AQ14432 1141 aa16.7■□□□□ 0.26
PTK2-226ENST00000520917 GJC2Q5T442 439 aaPredicted RBP16.7■□□□□ 0.26
PTK2-226ENST00000520917 ZNF280CQ8ND82 737 aa16.7■□□□□ 0.26
PTK2-226ENST00000520917 RNPC3Q96LT9 517 aaKnown RBP16.7■□□□□ 0.26
PTK2-226ENST00000520917 BICC1Q9H694 974 aaKnown RBP16.7■□□□□ 0.26
PTK2-226ENST00000520917 NBPF7P0C2Y1 421 aaPredicted RBP16.69■□□□□ 0.26
PTK2-226ENST00000520917 DNAJB2P25686 324 aa16.69■□□□□ 0.26
PTK2-226ENST00000520917 CNGA1P29973 690 aa16.69■□□□□ 0.26
PTK2-226ENST00000520917 RGS2P41220 211 aa16.69■□□□□ 0.26
PTK2-226ENST00000520917 IRX3P78415 501 aaPredicted RBP16.69■□□□□ 0.26
PTK2-226ENST00000520917 ANO1Q5XXA6 986 aa16.69■□□□□ 0.26
PTK2-226ENST00000520917 GPR142Q7Z601 462 aa16.69■□□□□ 0.26
PTK2-226ENST00000520917 TRPV1Q8NER1 839 aa16.69■□□□□ 0.26
PTK2-226ENST00000520917 APBA2Q99767 749 aa16.69■□□□□ 0.26
PTK2-226ENST00000520917 THEGQ9P2T0 379 aa16.69■□□□□ 0.26
PTK2-226ENST00000520917 DDX20Q9UHI6 824 aaKnown RBP16.69■□□□□ 0.26
PTK2-226ENST00000520917 CHD9Q3L8U1 2897 aa16.69■□□□□ 0.26
PTK2-226ENST00000520917 DNM1LO00429 736 aa16.68■□□□□ 0.26
PTK2-226ENST00000520917 IFIT1P09914 478 aaKnown RBP16.68■□□□□ 0.26
PTK2-226ENST00000520917 HERVK_113P62684 666 aa16.68■□□□□ 0.26
PTK2-226ENST00000520917 PABPC4Q13310 644 aaKnown RBP eCLIP16.68■□□□□ 0.26
PTK2-226ENST00000520917 PUM3Q15397 648 aaKnown RBP16.68■□□□□ 0.26
PTK2-226ENST00000520917 SLC39A5Q6ZMH5 540 aa16.68■□□□□ 0.26
PTK2-226ENST00000520917 ANKRD44Q8N8A2 993 aa16.68■□□□□ 0.26
PTK2-226ENST00000520917 GPRC5AQ8NFJ5 357 aa16.68■□□□□ 0.26
PTK2-226ENST00000520917 ATXN2LQ8WWM7 1075 aaKnown RBP16.68■□□□□ 0.26
PTK2-226ENST00000520917 PAGR1Q9BTK6 254 aa16.68■□□□□ 0.26
PTK2-226ENST00000520917 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.68■□□□□ 0.26
PTK2-226ENST00000520917 RBPJLQ9UBG7 517 aa16.68■□□□□ 0.26
PTK2-226ENST00000520917 CDK5RAP2Q96SN8 1893 aa16.67■□□□□ 0.26
PTK2-226ENST00000520917 XIRP2A4UGR9 3374 aa16.67■□□□□ 0.26
PTK2-226ENST00000520917 MTMR2Q13614 643 aa16.67■□□□□ 0.26
PTK2-226ENST00000520917 CCDC85BQ15834 202 aaPredicted RBP16.67■□□□□ 0.26
PTK2-226ENST00000520917 SHROOM1Q2M3G4 852 aaPredicted RBP16.67■□□□□ 0.26
PTK2-226ENST00000520917 SLC4A10Q6U841 1118 aa16.67■□□□□ 0.26
PTK2-226ENST00000520917 TRMT44Q8IYL2 757 aaKnown RBP16.67■□□□□ 0.26
PTK2-226ENST00000520917 LPAR1Q92633 364 aa16.67■□□□□ 0.26
PTK2-226ENST00000520917 ZNF576Q9H609 170 aa16.67■□□□□ 0.26
PTK2-226ENST00000520917 GAKO14976 1311 aa16.67■□□□□ 0.26
PTK2-226ENST00000520917 SYNGAP1Q96PV0 1343 aa16.67■□□□□ 0.26
PTK2-226ENST00000520917 ERVK-9P63128 1117 aa16.66■□□□□ 0.26
PTK2-226ENST00000520917 ERVK-24P63145 666 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms