RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 SART3Q15020 963 aaKnown RBP14.57□□□□□ -0.08
TRAPPC9-208ENST00000520857 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.57□□□□□ -0.08
TRAPPC9-208ENST00000520857 SENP2Q9HC62 589 aa14.57□□□□□ -0.08
TRAPPC9-208ENST00000520857 MAPK8IP1Q9UQF2 711 aa14.57□□□□□ -0.08
TRAPPC9-208ENST00000520857 AXIN2Q9Y2T1 843 aa14.57□□□□□ -0.08
TRAPPC9-208ENST00000520857 CTR9Q6PD62 1173 aa14.56□□□□□ -0.08
TRAPPC9-208ENST00000520857 RSRC2Q7L4I2 434 aaKnown RBP14.56□□□□□ -0.08
TRAPPC9-208ENST00000520857 NOSTRINQ8IVI9 506 aa14.56□□□□□ -0.08
TRAPPC9-208ENST00000520857 WASF1Q92558 559 aa14.56□□□□□ -0.08
TRAPPC9-208ENST00000520857 PNKPQ96T60 521 aa14.56□□□□□ -0.08
TRAPPC9-208ENST00000520857 FAM204AQ9H8W3 233 aa14.56□□□□□ -0.08
TRAPPC9-208ENST00000520857 TDO2P48775 406 aa14.56□□□□□ -0.08
TRAPPC9-208ENST00000520857 IFIT5Q13325 482 aaKnown RBP14.56□□□□□ -0.08
TRAPPC9-208ENST00000520857 SCARF1Q14162 830 aa14.56□□□□□ -0.08
TRAPPC9-208ENST00000520857 CASP8Q14790 479 aa14.56□□□□□ -0.08
TRAPPC9-208ENST00000520857 DEF6Q9H4E7 631 aa14.56□□□□□ -0.08
TRAPPC9-208ENST00000520857 JCADQ9P266 1359 aa14.56□□□□□ -0.08
TRAPPC9-208ENST00000520857 SYNRGQ9UMZ2 1314 aa14.56□□□□□ -0.08
TRAPPC9-208ENST00000520857 ZMYND10O75800 440 aa14.56□□□□□ -0.08
TRAPPC9-208ENST00000520857 VSNL1P62760 191 aa14.56□□□□□ -0.08
TRAPPC9-208ENST00000520857 PIP4K2BP78356 416 aa14.56□□□□□ -0.08
TRAPPC9-208ENST00000520857 NR5A1Q13285 461 aa14.56□□□□□ -0.08
TRAPPC9-208ENST00000520857 NCAPH2Q6IBW4 605 aa14.56□□□□□ -0.08
TRAPPC9-208ENST00000520857 RAD9BQ6WBX8 426 aa14.56□□□□□ -0.08
TRAPPC9-208ENST00000520857 DRC1Q96MC2 740 aa14.56□□□□□ -0.08
TRAPPC9-208ENST00000520857 ADGRG1Q9Y653 693 aa14.56□□□□□ -0.08
TRAPPC9-208ENST00000520857 NCAPD2Q15021 1401 aa14.56□□□□□ -0.08
TRAPPC9-208ENST00000520857 hCG_1642624A0A1W2PR95 340 aa14.55□□□□□ -0.08
TRAPPC9-208ENST00000520857 ENC1O14682 589 aa14.55□□□□□ -0.08
TRAPPC9-208ENST00000520857 CHRNA2Q15822 529 aa14.55□□□□□ -0.08
TRAPPC9-208ENST00000520857 RABL6Q3YEC7 729 aaPredicted RBP14.55□□□□□ -0.08
TRAPPC9-208ENST00000520857 LDHAL6AQ6ZMR3 332 aa14.55□□□□□ -0.08
TRAPPC9-208ENST00000520857 KIAA1328Q86T90 577 aa14.55□□□□□ -0.08
TRAPPC9-208ENST00000520857 MICALL1Q8N3F8 863 aa14.55□□□□□ -0.08
TRAPPC9-208ENST00000520857 ENOX1Q8TC92 643 aaKnown RBP14.55□□□□□ -0.08
TRAPPC9-208ENST00000520857 RGPD1P0DJD0 1748 aa14.55□□□□□ -0.08
TRAPPC9-208ENST00000520857 RICTORQ6R327 1708 aa14.55□□□□□ -0.08
TRAPPC9-208ENST00000520857 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.55□□□□□ -0.08
TRAPPC9-208ENST00000520857 RFX7Q2KHR2 1363 aa14.55□□□□□ -0.08
TRAPPC9-208ENST00000520857 FOXR1Q6PIV2 292 aa14.55□□□□□ -0.08
TRAPPC9-208ENST00000520857 CYB5R4Q7L1T6 521 aa14.55□□□□□ -0.08
TRAPPC9-208ENST00000520857 GPATCH11Q8N954 259 aa14.55□□□□□ -0.08
TRAPPC9-208ENST00000520857 MYO1BO43795 1136 aa14.55□□□□□ -0.08
TRAPPC9-208ENST00000520857 BMP6P22004 513 aa14.55□□□□□ -0.08
TRAPPC9-208ENST00000520857 CTDSPL2Q05D32 466 aa14.55□□□□□ -0.08
TRAPPC9-208ENST00000520857 RRAGBQ5VZM2 374 aa14.55□□□□□ -0.08
TRAPPC9-208ENST00000520857 KANK3Q6NY19 840 aa14.55□□□□□ -0.08
TRAPPC9-208ENST00000520857 CNGA4Q8IV77 575 aa14.55□□□□□ -0.08
TRAPPC9-208ENST00000520857 FAM89AQ96GI7 184 aa14.55□□□□□ -0.08
TRAPPC9-208ENST00000520857 CEP131Q9UPN4 1083 aa14.55□□□□□ -0.08
TRAPPC9-208ENST00000520857 PALLDQ8WX93 1383 aa14.54□□□□□ -0.08
TRAPPC9-208ENST00000520857 GPTP24298 496 aa14.54□□□□□ -0.08
TRAPPC9-208ENST00000520857 RTN1Q16799 776 aa14.54□□□□□ -0.08
TRAPPC9-208ENST00000520857 DNAJC21Q5F1R6 531 aaKnown RBP14.54□□□□□ -0.08
TRAPPC9-208ENST00000520857 USP49Q70CQ1 688 aa14.54□□□□□ -0.08
TRAPPC9-208ENST00000520857 ARHGEF25Q86VW2 580 aa14.54□□□□□ -0.08
TRAPPC9-208ENST00000520857 CTNND2Q9UQB3 1225 aa14.54□□□□□ -0.08
TRAPPC9-208ENST00000520857 PXDNQ92626 1479 aa14.54□□□□□ -0.08
TRAPPC9-208ENST00000520857 CCDC70Q6NSX1 233 aa14.54□□□□□ -0.08
TRAPPC9-208ENST00000520857 TBC1D10CQ8IV04 446 aa14.54□□□□□ -0.08
TRAPPC9-208ENST00000520857 TMEM139Q8IV31 216 aa14.54□□□□□ -0.08
TRAPPC9-208ENST00000520857 KIFC2Q96AC6 838 aa14.54□□□□□ -0.08
TRAPPC9-208ENST00000520857 TAB2Q9NYJ8 693 aa14.54□□□□□ -0.08
TRAPPC9-208ENST00000520857 HPSEQ9Y251 543 aa14.54□□□□□ -0.08
TRAPPC9-208ENST00000520857 PCDHB6Q9Y5E3 794 aa14.54□□□□□ -0.08
TRAPPC9-208ENST00000520857 KRT9P35527 623 aa14.54□□□□□ -0.08
TRAPPC9-208ENST00000520857 PTPAQ15257 358 aa14.54□□□□□ -0.08
TRAPPC9-208ENST00000520857 XBP1P17861 261 aa14.53□□□□□ -0.08
TRAPPC9-208ENST00000520857 CDC25AP30304 524 aa14.53□□□□□ -0.08
TRAPPC9-208ENST00000520857 PLCD1P51178 756 aa14.53□□□□□ -0.08
TRAPPC9-208ENST00000520857 FKBP15Q5T1M5 1219 aa14.53□□□□□ -0.08
TRAPPC9-208ENST00000520857 AFAP1L1Q8TED9 768 aa14.53□□□□□ -0.08
TRAPPC9-208ENST00000520857 TTF2Q9UNY4 1162 aaKnown RBP14.53□□□□□ -0.08
TRAPPC9-208ENST00000520857 NEDD4P46934 1319 aa14.53□□□□□ -0.08
TRAPPC9-208ENST00000520857 NRXN3Q9Y4C0 1643 aa14.53□□□□□ -0.08
TRAPPC9-208ENST00000520857 MATR3P43243 847 aaKnown RBP eCLIP14.53□□□□□ -0.084e-7■■■■□ 25.8
TRAPPC9-208ENST00000520857 MAP9Q49MG5 647 aa14.53□□□□□ -0.08
TRAPPC9-208ENST00000520857 BEND6Q5SZJ8 279 aaPredicted RBP14.53□□□□□ -0.08
TRAPPC9-208ENST00000520857 CTAGE1Q96RT6 745 aa14.53□□□□□ -0.08
TRAPPC9-208ENST00000520857 RUFY1Q96T51 708 aa14.53□□□□□ -0.08
TRAPPC9-208ENST00000520857 UBAC1Q9BSL1 405 aa14.53□□□□□ -0.08
TRAPPC9-208ENST00000520857 CSRNP2Q9H175 543 aa14.53□□□□□ -0.08
TRAPPC9-208ENST00000520857 MINDY4BA8MYZ0 360 aa14.53□□□□□ -0.08
TRAPPC9-208ENST00000520857 FOXO4P98177 505 aa14.53□□□□□ -0.08
TRAPPC9-208ENST00000520857 RILPL1Q5EBL4 403 aa14.53□□□□□ -0.08
TRAPPC9-208ENST00000520857 HELBQ8NG08 1087 aaPredicted RBP14.53□□□□□ -0.08
TRAPPC9-208ENST00000520857 BLZF1Q9H2G9 400 aa14.53□□□□□ -0.08
TRAPPC9-208ENST00000520857 TRIM75PA6NK02 468 aa14.52□□□□□ -0.08
TRAPPC9-208ENST00000520857 PHKG2P15735 406 aa14.52□□□□□ -0.08
TRAPPC9-208ENST00000520857 ANKZF1Q9H8Y5 726 aa14.52□□□□□ -0.08
TRAPPC9-208ENST00000520857 JADE2Q9NQC1 790 aa14.52□□□□□ -0.08
TRAPPC9-208ENST00000520857 WWC3Q9ULE0 1092 aa14.52□□□□□ -0.08
TRAPPC9-208ENST00000520857 EIF3CLB5ME19 914 aaKnown RBP14.52□□□□□ -0.09
TRAPPC9-208ENST00000520857 H0YHG0 523 aa14.52□□□□□ -0.09
TRAPPC9-208ENST00000520857 RNF40O75150 1001 aa14.52□□□□□ -0.09
TRAPPC9-208ENST00000520857 SLC20A2Q08357 652 aa14.52□□□□□ -0.09
TRAPPC9-208ENST00000520857 WTAPQ15007 396 aa14.52□□□□□ -0.09
TRAPPC9-208ENST00000520857 MFSD6Q6ZSS7 791 aa14.52□□□□□ -0.09
TRAPPC9-208ENST00000520857 EIF3CQ99613 913 aaKnown RBP14.52□□□□□ -0.09
TRAPPC9-208ENST00000520857 MYO6Q9UM54 1294 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms