RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 CCDC84Q86UT8 332 aaPredicted RBP24.1■■□□□ 1.45
PABPC1-215ENST00000520804 MKI67P46013 3256 aaKnown RBP24.1■■□□□ 1.45
PABPC1-215ENST00000520804 BAG3O95817 575 aa24.09■■□□□ 1.45
PABPC1-215ENST00000520804 AATFQ9NY61 560 aaKnown RBP eCLIP24.09■■□□□ 1.45
PABPC1-215ENST00000520804 ZBED9Q6R2W3 1325 aa24.09■■□□□ 1.45
PABPC1-215ENST00000520804 MYPNQ86TC9 1320 aa24.09■■□□□ 1.45
PABPC1-215ENST00000520804 IGSF3O75054 1194 aa24.08■■□□□ 1.45
PABPC1-215ENST00000520804 FCGRTP55899 365 aa24.08■■□□□ 1.45
PABPC1-215ENST00000520804 PPP4CP60510 307 aa24.08■■□□□ 1.45
PABPC1-215ENST00000520804 RAET1EQ8TD07 263 aa24.08■■□□□ 1.45
PABPC1-215ENST00000520804 DBNLQ9UJU6 430 aaKnown RBP24.08■■□□□ 1.45
PABPC1-215ENST00000520804 MGAMO43451 1857 aa24.07■■□□□ 1.44
PABPC1-215ENST00000520804 PLCG2P16885 1265 aa24.07■■□□□ 1.44
PABPC1-215ENST00000520804 HERC5Q9UII4 1024 aaKnown RBP24.07■■□□□ 1.44
PABPC1-215ENST00000520804 AGTPBP1Q9UPW5 1226 aa24.07■■□□□ 1.44
PABPC1-215ENST00000520804 ATAD5Q96QE3 1844 aa24.06■■□□□ 1.44
PABPC1-215ENST00000520804 CAP2P40123 477 aa24.06■■□□□ 1.44
PABPC1-215ENST00000520804 ZAP70P43403 619 aa24.06■■□□□ 1.44
PABPC1-215ENST00000520804 RRP1BQ14684 758 aaKnown RBP24.06■■□□□ 1.44
PABPC1-215ENST00000520804 CEP85Q6P2H3 762 aa24.06■■□□□ 1.44
PABPC1-215ENST00000520804 ADGRA1Q86SQ6 560 aa24.06■■□□□ 1.44
PABPC1-215ENST00000520804 EAF2Q96CJ1 260 aaPredicted RBP24.06■■□□□ 1.44
PABPC1-215ENST00000520804 TBC1D2Q9BYX2 928 aa24.06■■□□□ 1.44
PABPC1-215ENST00000520804 DHX36Q9H2U1 1008 aaKnown RBP24.06■■□□□ 1.44
PABPC1-215ENST00000520804 TLR7Q9NYK1 1049 aaKnown RBP24.06■■□□□ 1.44
PABPC1-215ENST00000520804 PI4KBQ9UBF8 816 aa24.06■■□□□ 1.44
PABPC1-215ENST00000520804 MYO5AQ9Y4I1 1855 aaKnown RBP24.05■■□□□ 1.44
PABPC1-215ENST00000520804 GRK4P32298 578 aa24.05■■□□□ 1.44
PABPC1-215ENST00000520804 PRKCZQ05513 592 aa24.05■■□□□ 1.44
PABPC1-215ENST00000520804 SPP2Q13103 211 aa24.05■■□□□ 1.44
PABPC1-215ENST00000520804 ZNF280CQ8ND82 737 aa24.05■■□□□ 1.44
PABPC1-215ENST00000520804 SMCR8Q8TEV9 937 aaPredicted RBP24.05■■□□□ 1.44
PABPC1-215ENST00000520804 CCDC8Q9H0W5 538 aaPredicted RBP24.05■■□□□ 1.44
PABPC1-215ENST00000520804 PIH1D3Q9NQM4 214 aaKnown RBP24.05■■□□□ 1.44
PABPC1-215ENST00000520804 SIPA1L1O43166 1804 aa24.05■■□□□ 1.44
PABPC1-215ENST00000520804 MTFR1Q15390 333 aa24.04■■□□□ 1.44
PABPC1-215ENST00000520804 TREML2Q5T2D2 321 aa24.04■■□□□ 1.44
PABPC1-215ENST00000520804 PROCA1Q8NCQ7 364 aaPredicted RBP24.04■■□□□ 1.44
PABPC1-215ENST00000520804 TGFBRAP1Q8WUH2 860 aa24.04■■□□□ 1.44
PABPC1-215ENST00000520804 CDK5RAP2Q96SN8 1893 aa24.04■■□□□ 1.44
PABPC1-215ENST00000520804 FOCADQ5VW36 1801 aa24.03■■□□□ 1.44
PABPC1-215ENST00000520804 MAPKAPK5Q8IW41 473 aa24.03■■□□□ 1.44
PABPC1-215ENST00000520804 PANK1Q8TE04 598 aa24.03■■□□□ 1.44
PABPC1-215ENST00000520804 GCC1Q96CN9 775 aa24.03■■□□□ 1.44
PABPC1-215ENST00000520804 PNMA3Q9UL41 463 aa24.03■■□□□ 1.44
PABPC1-215ENST00000520804 GABRQQ9UN88 632 aa24.03■■□□□ 1.44
PABPC1-215ENST00000520804 FLT1P17948 1338 aa24.03■■□□□ 1.44
PABPC1-215ENST00000520804 LOC285556D6RIA3 1793 aa24.03■■□□□ 1.44
PABPC1-215ENST00000520804 USP17L5A8MUK1 530 aa24.02■■□□□ 1.44
PABPC1-215ENST00000520804 METTL16Q86W50 562 aaKnown RBP24.01■■□□□ 1.43
PABPC1-215ENST00000520804 ERC1Q8IUD2 1116 aa24.01■■□□□ 1.43
PABPC1-215ENST00000520804 FOXP4Q8IVH2 680 aaPredicted RBP24.01■■□□□ 1.43
PABPC1-215ENST00000520804 SLAIN1Q8ND83 568 aa24.01■■□□□ 1.43
PABPC1-215ENST00000520804 AS3MTQ9HBK9 375 aa24.01■■□□□ 1.43
PABPC1-215ENST00000520804 CYP7A1P22680 504 aa24■■□□□ 1.43
PABPC1-215ENST00000520804 HMGCS2P54868 508 aa24■■□□□ 1.43
PABPC1-215ENST00000520804 SH3D19Q5HYK7 790 aa24■■□□□ 1.43
PABPC1-215ENST00000520804 ANKRD13CQ8N6S4 541 aa24■■□□□ 1.43
PABPC1-215ENST00000520804 DNAJC18Q9H819 358 aa24■■□□□ 1.43
PABPC1-215ENST00000520804 EXOC6BQ9Y2D4 811 aa24■■□□□ 1.43
PABPC1-215ENST00000520804 TNPO2O14787 897 aaKnown RBP23.99■■□□□ 1.43
PABPC1-215ENST00000520804 IDH1O75874 414 aaKnown RBP23.99■■□□□ 1.43
PABPC1-215ENST00000520804 CCL5P13501 91 aa23.99■■□□□ 1.43
PABPC1-215ENST00000520804 FLT3LGP49771 235 aa23.99■■□□□ 1.43
PABPC1-215ENST00000520804 DYNLL1P63167 89 aaKnown RBP23.99■■□□□ 1.43
PABPC1-215ENST00000520804 UBXN2AP68543 259 aa23.99■■□□□ 1.43
PABPC1-215ENST00000520804 PABPC4Q13310 644 aaKnown RBP eCLIP23.99■■□□□ 1.431e-323■■■■■ 69.4
PABPC1-215ENST00000520804 SHISA4Q96DD7 197 aa23.99■■□□□ 1.43
PABPC1-215ENST00000520804 WDR18Q9BV38 432 aa23.99■■□□□ 1.43
PABPC1-215ENST00000520804 BIN2Q9UBW5 565 aaPredicted RBP23.99■■□□□ 1.43
PABPC1-215ENST00000520804 PALD1Q9ULE6 856 aa23.99■■□□□ 1.43
PABPC1-215ENST00000520804 ASNSP08243 561 aa23.98■■□□□ 1.43
PABPC1-215ENST00000520804 FAM110CQ1W6H9 321 aa23.98■■□□□ 1.43
PABPC1-215ENST00000520804 CRACR2BQ8N4Y2 399 aaPredicted RBP23.98■■□□□ 1.43
PABPC1-215ENST00000520804 NKX2-3Q8TAU0 364 aa23.98■■□□□ 1.43
PABPC1-215ENST00000520804 ADCY3O60266 1144 aa23.97■■□□□ 1.43
PABPC1-215ENST00000520804 GJB1P08034 283 aa23.97■■□□□ 1.43
PABPC1-215ENST00000520804 MS4A1P11836 297 aa23.97■■□□□ 1.43
PABPC1-215ENST00000520804 GJA8P48165 433 aa23.97■■□□□ 1.43
PABPC1-215ENST00000520804 GCLCP48506 637 aaPredicted RBP23.97■■□□□ 1.43
PABPC1-215ENST00000520804 JAG1P78504 1218 aa23.97■■□□□ 1.43
PABPC1-215ENST00000520804 IRF5Q13568 498 aa23.97■■□□□ 1.43
PABPC1-215ENST00000520804 AACSQ86V21 672 aa23.97■■□□□ 1.43
PABPC1-215ENST00000520804 TRIM34Q9BYJ4 488 aa23.97■■□□□ 1.43
PABPC1-215ENST00000520804 SAP30BPQ9UHR5 308 aaKnown RBP23.97■■□□□ 1.43
PABPC1-215ENST00000520804 NDUFB9Q9Y6M9 179 aa23.97■■□□□ 1.43
PABPC1-215ENST00000520804 HSP90AB4PQ58FF6 505 aa23.96■■□□□ 1.43
PABPC1-215ENST00000520804 CERS3Q8IU89 383 aa23.96■■□□□ 1.43
PABPC1-215ENST00000520804 MAGEB6Q8N7X4 407 aa23.96■■□□□ 1.43
PABPC1-215ENST00000520804 PXYLP1Q8TE99 480 aa23.96■■□□□ 1.43
PABPC1-215ENST00000520804 RNF208Q9H0X6 261 aa23.96■■□□□ 1.43
PABPC1-215ENST00000520804 ANTXR1Q9H6X2 564 aa23.96■■□□□ 1.43
PABPC1-215ENST00000520804 GINM1Q9NU53 330 aa23.96■■□□□ 1.43
PABPC1-215ENST00000520804 HLA-DOAP06340 250 aa23.95■■□□□ 1.42
PABPC1-215ENST00000520804 BACE1P56817 501 aa23.95■■□□□ 1.42
PABPC1-215ENST00000520804 MTMR2Q13614 643 aa23.95■■□□□ 1.42
PABPC1-215ENST00000520804 MIGA1Q8NAN2 632 aa23.95■■□□□ 1.42
PABPC1-215ENST00000520804 COA7Q96BR5 231 aa23.95■■□□□ 1.42
PABPC1-215ENST00000520804 ASCC2Q9H1I8 757 aaPredicted RBP23.95■■□□□ 1.42
PABPC1-215ENST00000520804 ELNP15502 786 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms