RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 NEDD4P46934 1319 aa11.56□□□□□ -0.56
SPARC-202ENST00000520687 SSRP1Q08945 709 aaKnown RBP11.56□□□□□ -0.56
SPARC-202ENST00000520687 WTAPQ15007 396 aa11.56□□□□□ -0.56
SPARC-202ENST00000520687 ADALQ6DHV7 355 aa11.56□□□□□ -0.56
SPARC-202ENST00000520687 FAM173BQ6P4H8 233 aa11.56□□□□□ -0.56
SPARC-202ENST00000520687 TRIM22Q8IYM9 498 aa11.56□□□□□ -0.56
SPARC-202ENST00000520687 PGBD1Q96JS3 809 aa11.56□□□□□ -0.56
SPARC-202ENST00000520687 UBAC1Q9BSL1 405 aa11.56□□□□□ -0.56
SPARC-202ENST00000520687 GPHNQ9NQX3 736 aaPredicted RBP11.56□□□□□ -0.56
SPARC-202ENST00000520687 DACT1Q9NYF0 836 aa11.56□□□□□ -0.56
SPARC-202ENST00000520687 XDHP47989 1333 aa11.55□□□□□ -0.56
SPARC-202ENST00000520687 BBOX1O75936 387 aa11.55□□□□□ -0.56
SPARC-202ENST00000520687 FMNL1O95466 1100 aaPredicted RBP11.55□□□□□ -0.56
SPARC-202ENST00000520687 LDHCP07864 332 aa11.55□□□□□ -0.56
SPARC-202ENST00000520687 LIG1P18858 919 aa11.55□□□□□ -0.56
SPARC-202ENST00000520687 ST5P78524 1137 aa11.55□□□□□ -0.56
SPARC-202ENST00000520687 MAP2K1Q02750 393 aaPredicted RBP11.55□□□□□ -0.56
SPARC-202ENST00000520687 FAM160A1Q05DH4 1040 aa11.55□□□□□ -0.56
SPARC-202ENST00000520687 NFIXQ14938 502 aa11.55□□□□□ -0.56
SPARC-202ENST00000520687 SBK1Q52WX2 424 aa11.55□□□□□ -0.56
SPARC-202ENST00000520687 CCDC178Q5BJE1 867 aa11.55□□□□□ -0.56
SPARC-202ENST00000520687 SASS6Q6UVJ0 657 aa11.55□□□□□ -0.56
SPARC-202ENST00000520687 UBE2Q2Q8WVN8 375 aa11.55□□□□□ -0.56
SPARC-202ENST00000520687 ALG1Q9BT22 464 aa11.55□□□□□ -0.56
SPARC-202ENST00000520687 GLTPD2A6NH11 291 aa11.54□□□□□ -0.56
SPARC-202ENST00000520687 ORC4O43929 436 aa11.54□□□□□ -0.56
SPARC-202ENST00000520687 KIF23Q02241 960 aaPredicted RBP11.54□□□□□ -0.56
SPARC-202ENST00000520687 CTDSPL2Q05D32 466 aa11.54□□□□□ -0.56
SPARC-202ENST00000520687 SAFBQ15424 915 aaKnown RBP eCLIP11.54□□□□□ -0.56
SPARC-202ENST00000520687 SF3A1Q15459 793 aaKnown RBP11.54□□□□□ -0.56
SPARC-202ENST00000520687 NTRK3Q16288 839 aa11.54□□□□□ -0.56
SPARC-202ENST00000520687 MYSM1Q5VVJ2 828 aa11.54□□□□□ -0.56
SPARC-202ENST00000520687 ZNF804AQ7Z570 1209 aa11.54□□□□□ -0.56
SPARC-202ENST00000520687 FAM200AQ8TCP9 573 aa11.54□□□□□ -0.56
SPARC-202ENST00000520687 NSUN4Q96CB9 384 aaKnown RBP11.54□□□□□ -0.56
SPARC-202ENST00000520687 RBM17Q96I25 401 aaKnown RBP11.54□□□□□ -0.56
SPARC-202ENST00000520687 USP28Q96RU2 1077 aa11.54□□□□□ -0.56
SPARC-202ENST00000520687 NOL7Q9UMY1 257 aaKnown RBP11.54□□□□□ -0.56
SPARC-202ENST00000520687 BRCA1P38398 1863 aaKnown RBP11.54□□□□□ -0.56
SPARC-202ENST00000520687 TNRC18O15417 2968 aaPredicted RBP11.54□□□□□ -0.56
SPARC-202ENST00000520687 PRKAB2O43741 272 aa11.54□□□□□ -0.56
SPARC-202ENST00000520687 KINO60870 393 aaKnown RBP11.54□□□□□ -0.56
SPARC-202ENST00000520687 ATP2B4P23634 1241 aa11.54□□□□□ -0.56
SPARC-202ENST00000520687 MSNP26038 577 aaKnown RBP11.54□□□□□ -0.56
SPARC-202ENST00000520687 U2AF2P26368 475 aaKnown RBP eCLIP11.54□□□□□ -0.56
SPARC-202ENST00000520687 HOXA10P31260 410 aaPredicted RBP11.54□□□□□ -0.56
SPARC-202ENST00000520687 ME1P48163 572 aa11.54□□□□□ -0.56
SPARC-202ENST00000520687 VEGFBP49765 207 aa11.54□□□□□ -0.56
SPARC-202ENST00000520687 TYRO3Q06418 890 aa11.54□□□□□ -0.56
SPARC-202ENST00000520687 STK38Q15208 465 aa11.54□□□□□ -0.56
SPARC-202ENST00000520687 RTN1Q16799 776 aa11.54□□□□□ -0.56
SPARC-202ENST00000520687 CRY2Q49AN0 593 aa11.54□□□□□ -0.56
SPARC-202ENST00000520687 IQCA1Q86XH1 822 aa11.54□□□□□ -0.56
SPARC-202ENST00000520687 CCAR1Q8IX12 1150 aaKnown RBP11.54□□□□□ -0.56
SPARC-202ENST00000520687 MIGA1Q8NAN2 632 aa11.54□□□□□ -0.56
SPARC-202ENST00000520687 LINC00301Q8NCQ3 95 aa11.54□□□□□ -0.56
SPARC-202ENST00000520687 RNF214Q8ND24 703 aa11.54□□□□□ -0.56
SPARC-202ENST00000520687 MRPS27Q92552 414 aaKnown RBP11.54□□□□□ -0.56
SPARC-202ENST00000520687 RPGRQ92834 1020 aaKnown RBP11.54□□□□□ -0.56
SPARC-202ENST00000520687 NOL10Q9BSC4 688 aaKnown RBP11.54□□□□□ -0.56
SPARC-202ENST00000520687 RBM28Q9NW13 759 aaKnown RBP11.54□□□□□ -0.56
SPARC-202ENST00000520687 ARPP21Q9UBL0 812 aaPredicted RBP11.54□□□□□ -0.56
SPARC-202ENST00000520687 USP25Q9UHP3 1055 aa11.54□□□□□ -0.56
SPARC-202ENST00000520687 IRS2Q9Y4H2 1338 aa11.53□□□□□ -0.56
SPARC-202ENST00000520687 SPTLC2O15270 562 aa11.53□□□□□ -0.56
SPARC-202ENST00000520687 PPP6R2O75170 966 aa11.53□□□□□ -0.56
SPARC-202ENST00000520687 DEXIO95424 95 aa11.53□□□□□ -0.56
SPARC-202ENST00000520687 XBP1P17861 261 aa11.53□□□□□ -0.56
SPARC-202ENST00000520687 CACNB1Q02641 598 aaPredicted RBP11.53□□□□□ -0.56
SPARC-202ENST00000520687 MECOMQ03112 1051 aa11.53□□□□□ -0.56
SPARC-202ENST00000520687 ANO1Q5XXA6 986 aa11.53□□□□□ -0.56
SPARC-202ENST00000520687 FANCBQ8NB91 859 aa11.53□□□□□ -0.56
SPARC-202ENST00000520687 TDRD7Q8NHU6 1098 aaKnown RBP11.53□□□□□ -0.56
SPARC-202ENST00000520687 CRAMP1Q96RY5 1269 aa11.53□□□□□ -0.56
SPARC-202ENST00000520687 TOMM22Q9NS69 142 aa11.53□□□□□ -0.56
SPARC-202ENST00000520687 FAM217BQ9NTX9 383 aaPredicted RBP11.53□□□□□ -0.56
SPARC-202ENST00000520687 MORC2Q9Y6X9 1032 aaPredicted RBP11.53□□□□□ -0.56
SPARC-202ENST00000520687 TCHHQ07283 1943 aa11.52□□□□□ -0.56
SPARC-202ENST00000520687 DUOX1Q9NRD9 1551 aa11.52□□□□□ -0.57
SPARC-202ENST00000520687 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.52□□□□□ -0.57
SPARC-202ENST00000520687 NR1I2O75469 434 aa11.52□□□□□ -0.57
SPARC-202ENST00000520687 DDAH1O94760 285 aa11.52□□□□□ -0.57
SPARC-202ENST00000520687 BAG3O95817 575 aa11.52□□□□□ -0.57
SPARC-202ENST00000520687 CMA1P23946 247 aa11.52□□□□□ -0.57
SPARC-202ENST00000520687 PPP4CP60510 307 aa11.52□□□□□ -0.57
SPARC-202ENST00000520687 PDE4BQ07343 736 aa11.52□□□□□ -0.57
SPARC-202ENST00000520687 GNL2Q13823 731 aaKnown RBP11.52□□□□□ -0.57
SPARC-202ENST00000520687 SLC39A14Q15043 492 aa11.52□□□□□ -0.57
SPARC-202ENST00000520687 KRT40Q6A162 431 aa11.52□□□□□ -0.57
SPARC-202ENST00000520687 CATIPQ7Z7H3 387 aa11.52□□□□□ -0.57
SPARC-202ENST00000520687 MICU3Q86XE3 530 aa11.52□□□□□ -0.57
SPARC-202ENST00000520687 SLF2Q8IX21 1173 aa11.52□□□□□ -0.57
SPARC-202ENST00000520687 AMOTL1Q8IY63 956 aa11.52□□□□□ -0.57
SPARC-202ENST00000520687 ENGASEQ8NFI3 743 aa11.52□□□□□ -0.57
SPARC-202ENST00000520687 ZSCAN10Q96SZ4 725 aaPredicted RBP11.52□□□□□ -0.57
SPARC-202ENST00000520687 FOXP1Q9H334 677 aaPredicted RBP11.52□□□□□ -0.57
SPARC-202ENST00000520687 ANKIB1Q9P2G1 1089 aa11.52□□□□□ -0.57
SPARC-202ENST00000520687 COL1A1P02452 1464 aaPredicted RBP11.52□□□□□ -0.57
SPARC-202ENST00000520687 MYH13Q9UKX3 1938 aa11.52□□□□□ -0.57
SPARC-202ENST00000520687 KLRG2A4D1S0 409 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms