RNA–Protein interactions for RNA: ENST00000520668.1

CDH12-205, Transcript of cadherin 12, humanhuman

TSL 4

Gene CDH12, Length 539 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-205ENST00000520668 CCER2I3L3R5 266 aa8.6□□□□□ -1.03
CDH12-205ENST00000520668 HIRAP54198 1017 aaPredicted RBP8.6□□□□□ -1.03
CDH12-205ENST00000520668 GNAI1P63096 354 aa8.6□□□□□ -1.03
CDH12-205ENST00000520668 TRIM22Q8IYM9 498 aa8.6□□□□□ -1.03
CDH12-205ENST00000520668 VWA5B2Q8N398 1253 aa8.6□□□□□ -1.03
CDH12-205ENST00000520668 XAGE3Q8WTP9 111 aa8.6□□□□□ -1.03
CDH12-205ENST00000520668 NANOS1Q8WY41 292 aaKnown RBP8.6□□□□□ -1.03
CDH12-205ENST00000520668 PHAXQ9H814 394 aaKnown RBP8.6□□□□□ -1.03
CDH12-205ENST00000520668 ZDHHC3Q9NYG2 299 aa8.6□□□□□ -1.03
CDH12-205ENST00000520668 CHMP3Q9Y3E7 222 aa8.6□□□□□ -1.03
CDH12-205ENST00000520668 ATP10DQ9P241 1426 aa8.6□□□□□ -1.03
CDH12-205ENST00000520668 CDC14CA4D256 554 aa8.59□□□□□ -1.03
CDH12-205ENST00000520668 FAM177BA6PVY3 158 aa8.59□□□□□ -1.03
CDH12-205ENST00000520668 WFS1O76024 890 aa8.59□□□□□ -1.03
CDH12-205ENST00000520668 GPTP24298 496 aa8.59□□□□□ -1.03
CDH12-205ENST00000520668 AIMP1Q12904 312 aaKnown RBP8.59□□□□□ -1.03
CDH12-205ENST00000520668 FKBP5Q13451 457 aaPredicted RBP8.59□□□□□ -1.03
CDH12-205ENST00000520668 COPS6Q7L5N1 327 aa8.59□□□□□ -1.03
CDH12-205ENST00000520668 G2E3Q7L622 706 aa8.59□□□□□ -1.03
CDH12-205ENST00000520668 GPR161Q8N6U8 529 aaKnown RBP8.59□□□□□ -1.03
CDH12-205ENST00000520668 RETREG2Q8NC44 543 aa8.59□□□□□ -1.03
CDH12-205ENST00000520668 C1orf216Q8TAB5 229 aa8.59□□□□□ -1.03
CDH12-205ENST00000520668 C7orf43Q8WVR3 580 aa8.59□□□□□ -1.03
CDH12-205ENST00000520668 ZNF837Q96EG3 531 aaPredicted RBP8.59□□□□□ -1.03
CDH12-205ENST00000520668 DDX21Q9NR30 783 aaKnown RBP eCLIP8.59□□□□□ -1.03
CDH12-205ENST00000520668 SPEF2Q9C093 1822 aa8.59□□□□□ -1.03
CDH12-205ENST00000520668 IL16Q14005 1332 aa8.58□□□□□ -1.04
CDH12-205ENST00000520668 TIAM2Q8IVF5 1701 aa8.58□□□□□ -1.04
CDH12-205ENST00000520668 EXOSC9Q06265 439 aaKnown RBP8.58□□□□□ -1.04
CDH12-205ENST00000520668 LCE2AQ5TA79 106 aaPredicted RBP8.58□□□□□ -1.04
CDH12-205ENST00000520668 SUSD4Q5VX71 490 aa8.58□□□□□ -1.04
CDH12-205ENST00000520668 TREML4Q6UXN2 200 aa8.58□□□□□ -1.04
CDH12-205ENST00000520668 ZNF34Q8IZ26 560 aa8.58□□□□□ -1.04
CDH12-205ENST00000520668 SYNE4Q8N205 404 aa8.58□□□□□ -1.04
CDH12-205ENST00000520668 KLRG1Q96E93 195 aa8.58□□□□□ -1.04
CDH12-205ENST00000520668 ZIC5Q96T25 663 aa8.58□□□□□ -1.04
CDH12-205ENST00000520668 PHACTR1Q9C0D0 580 aa8.58□□□□□ -1.04
CDH12-205ENST00000520668 CRISPLD1Q9H336 500 aa8.58□□□□□ -1.04
CDH12-205ENST00000520668 CXXC1Q9P0U4 656 aaPredicted RBP8.58□□□□□ -1.04
CDH12-205ENST00000520668 NIP7Q9Y221 180 aaKnown RBP eCLIP8.58□□□□□ -1.04
CDH12-205ENST00000520668 MYH3P11055 1940 aa8.57□□□□□ -1.04
CDH12-205ENST00000520668 DICER1Q9UPY3 1922 aaKnown RBP8.57□□□□□ -1.04
CDH12-205ENST00000520668 ERVV-1B6SEH8 477 aa8.57□□□□□ -1.04
CDH12-205ENST00000520668 H7C1W4 665 aa8.57□□□□□ -1.04
CDH12-205ENST00000520668 VAMP4O75379 141 aa8.57□□□□□ -1.04
CDH12-205ENST00000520668 NTSR2O95665 410 aa8.57□□□□□ -1.04
CDH12-205ENST00000520668 HOXB7P09629 217 aa8.57□□□□□ -1.04
CDH12-205ENST00000520668 VSIG8P0DPA2 414 aa8.57□□□□□ -1.04
CDH12-205ENST00000520668 PRELPP51888 382 aa8.57□□□□□ -1.04
CDH12-205ENST00000520668 GPR162Q16538 588 aa8.57□□□□□ -1.04
CDH12-205ENST00000520668 ARSJQ5FYB0 599 aaPredicted RBP8.57□□□□□ -1.04
CDH12-205ENST00000520668 CLEC4GQ6UXB4 293 aa8.57□□□□□ -1.04
CDH12-205ENST00000520668 SV2AQ7L0J3 742 aa8.57□□□□□ -1.04
CDH12-205ENST00000520668 WDR63Q8IWG1 891 aa8.57□□□□□ -1.04
CDH12-205ENST00000520668 ALDH16A1Q8IZ83 802 aa8.57□□□□□ -1.04
CDH12-205ENST00000520668 PGBD3Q8N328 593 aa8.57□□□□□ -1.04
CDH12-205ENST00000520668 NUCKS1Q9H1E3 243 aaKnown RBP8.57□□□□□ -1.04
CDH12-205ENST00000520668 ADCY9O60503 1353 aa8.57□□□□□ -1.04
CDH12-205ENST00000520668 A0A1W2PNR3 127 aa8.56□□□□□ -1.04
CDH12-205ENST00000520668 ATP2B4P23634 1241 aa8.56□□□□□ -1.04
CDH12-205ENST00000520668 TGFB2P61812 414 aa8.56□□□□□ -1.04
CDH12-205ENST00000520668 UBAP2LQ14157 1087 aaKnown RBP8.56□□□□□ -1.04
CDH12-205ENST00000520668 TWISTNBQ3B726 338 aaPredicted RBP8.56□□□□□ -1.04
CDH12-205ENST00000520668 C1orf53Q5VUE5 145 aa8.56□□□□□ -1.04
CDH12-205ENST00000520668 KIF6Q6ZMV9 814 aa8.56□□□□□ -1.04
CDH12-205ENST00000520668 CAPN12Q6ZSI9 719 aa8.56□□□□□ -1.04
CDH12-205ENST00000520668 IRF7Q92985 503 aa8.56□□□□□ -1.04
CDH12-205ENST00000520668 GMCL1Q96IK5 515 aa8.56□□□□□ -1.04
CDH12-205ENST00000520668 SETDB2Q96T68 719 aa8.56□□□□□ -1.04
CDH12-205ENST00000520668 USTQ9Y2C2 406 aa8.56□□□□□ -1.04
CDH12-205ENST00000520668 SNED1Q8TER0 1413 aa8.55□□□□□ -1.04
CDH12-205ENST00000520668 LRRC37AA6NMS7 1700 aa8.55□□□□□ -1.04
CDH12-205ENST00000520668 CALD1Q05682 793 aaKnown RBP8.55□□□□□ -1.04
CDH12-205ENST00000520668 OLFM4Q6UX06 510 aa8.55□□□□□ -1.04
CDH12-205ENST00000520668 NBPF5PQ86XG9 351 aaPredicted RBP8.55□□□□□ -1.04
CDH12-205ENST00000520668 C2CD5Q86YS7 1000 aa8.55□□□□□ -1.04
CDH12-205ENST00000520668 CNBD1Q8NA66 436 aa8.55□□□□□ -1.04
CDH12-205ENST00000520668 GTPBP3Q969Y2 492 aaKnown RBP8.55□□□□□ -1.04
CDH12-205ENST00000520668 DBF4Q9UBU7 674 aaPredicted RBP8.55□□□□□ -1.04
CDH12-205ENST00000520668 BCS1LQ9Y276 419 aa8.55□□□□□ -1.04
CDH12-205ENST00000520668 A0A1B0GUL6 1792 aa8.55□□□□□ -1.04
CDH12-205ENST00000520668 COL4A5P29400 1685 aa8.54□□□□□ -1.04
CDH12-205ENST00000520668 IBTKQ9P2D0 1353 aaPredicted RBP8.54□□□□□ -1.04
CDH12-205ENST00000520668 GPR25O00155 361 aa8.54□□□□□ -1.04
CDH12-205ENST00000520668 SRGNP10124 158 aa8.54□□□□□ -1.04
CDH12-205ENST00000520668 SLFN5Q08AF3 891 aa8.54□□□□□ -1.04
CDH12-205ENST00000520668 LBRQ14739 615 aaKnown RBP8.54□□□□□ -1.04
CDH12-205ENST00000520668 EFHC2Q5JST6 749 aa8.54□□□□□ -1.04
CDH12-205ENST00000520668 NLRP10Q86W26 655 aa8.54□□□□□ -1.04
CDH12-205ENST00000520668 TRMT2AQ8IZ69 625 aaKnown RBP8.54□□□□□ -1.04
CDH12-205ENST00000520668 PLBD2Q8NHP8 589 aa8.54□□□□□ -1.04
CDH12-205ENST00000520668 RHPN1Q8TCX5 695 aa8.54□□□□□ -1.04
CDH12-205ENST00000520668 MKNK1Q9BUB5 465 aa8.54□□□□□ -1.04
CDH12-205ENST00000520668 ISCA1Q9BUE6 129 aa8.54□□□□□ -1.04
CDH12-205ENST00000520668 BRIP1Q9BX63 1249 aa8.54□□□□□ -1.04
CDH12-205ENST00000520668 ZNF652Q9Y2D9 606 aa8.54□□□□□ -1.04
CDH12-205ENST00000520668 LTBP1Q14766 1721 aa8.54□□□□□ -1.04
CDH12-205ENST00000520668 RIC1Q4ADV7 1423 aa8.54□□□□□ -1.04
CDH12-205ENST00000520668 KLRG2A4D1S0 409 aaPredicted RBP8.53□□□□□ -1.04
CDH12-205ENST00000520668 SCNN1AP37088 669 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms