RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 H2AFB1P0C5Y9 115 aa10.06□□□□□ -0.8
PTPN12-213ENST00000519553 H2AFB2P0C5Z0 115 aa10.06□□□□□ -0.8
PTPN12-213ENST00000519553 GJA8P48165 433 aa10.06□□□□□ -0.8
PTPN12-213ENST00000519553 TNNI2P48788 182 aa10.06□□□□□ -0.8
PTPN12-213ENST00000519553 APOBRQ0VD83 1088 aa10.06□□□□□ -0.8
PTPN12-213ENST00000519553 SMYD4Q8IYR2 804 aaPredicted RBP10.06□□□□□ -0.8
PTPN12-213ENST00000519553 WNT10AQ9GZT5 417 aa10.06□□□□□ -0.8
PTPN12-213ENST00000519553 KCNF1Q9H3M0 494 aa10.06□□□□□ -0.8
PTPN12-213ENST00000519553 SEZ6L2Q6UXD5 910 aa10.05□□□□□ -0.8
PTPN12-213ENST00000519553 CLEC10AQ8IUN9 316 aa10.05□□□□□ -0.8
PTPN12-213ENST00000519553 SLITRK4Q8IW52 837 aa10.05□□□□□ -0.8
PTPN12-213ENST00000519553 FAM83CQ9BQN1 747 aa10.05□□□□□ -0.8
PTPN12-213ENST00000519553 YIPF2Q9BWQ6 316 aa10.05□□□□□ -0.8
PTPN12-213ENST00000519553 C7orf69Q9H7B7 122 aa10.05□□□□□ -0.8
PTPN12-213ENST00000519553 DAGLAQ9Y4D2 1042 aa10.05□□□□□ -0.8
PTPN12-213ENST00000519553 CORINQ9Y5Q5 1042 aa10.05□□□□□ -0.8
PTPN12-213ENST00000519553 PRR36Q9H6K5 1346 aa10.05□□□□□ -0.8
PTPN12-213ENST00000519553 HMX2A2RU54 273 aa10.04□□□□□ -0.8
PTPN12-213ENST00000519553 DYNC1LI2O43237 492 aaPredicted RBP10.04□□□□□ -0.8
PTPN12-213ENST00000519553 RXRBP28702 533 aa10.04□□□□□ -0.8
PTPN12-213ENST00000519553 GRK4P32298 578 aa10.04□□□□□ -0.8
PTPN12-213ENST00000519553 CWF19L2Q2TBE0 894 aaKnown RBP10.04□□□□□ -0.8
PTPN12-213ENST00000519553 DIEXFQ68CQ4 756 aaKnown RBP10.04□□□□□ -0.8
PTPN12-213ENST00000519553 FBRSQ9HAH7 460 aa10.04□□□□□ -0.8
PTPN12-213ENST00000519553 PICK1Q9NRD5 415 aa10.04□□□□□ -0.8
PTPN12-213ENST00000519553 FAM95CA0A1B0GW59 222 aa10.03□□□□□ -0.8
PTPN12-213ENST00000519553 DYRK3O43781 588 aa10.03□□□□□ -0.8
PTPN12-213ENST00000519553 GRIN3BO60391 1043 aa10.03□□□□□ -0.8
PTPN12-213ENST00000519553 RNGTTO60942 597 aaKnown RBP10.03□□□□□ -0.8
PTPN12-213ENST00000519553 SEZ6Q53EL9 994 aa10.03□□□□□ -0.8
PTPN12-213ENST00000519553 RASGRP4Q8TDF6 673 aa10.03□□□□□ -0.8
PTPN12-213ENST00000519553 GPRASP2Q96D09 838 aa10.03□□□□□ -0.8
PTPN12-213ENST00000519553 TINF2Q9BSI4 451 aa10.03□□□□□ -0.8
PTPN12-213ENST00000519553 BRMS1Q9HCU9 246 aa10.03□□□□□ -0.8
PTPN12-213ENST00000519553 STOML1Q9UBI4 398 aa10.03□□□□□ -0.8
PTPN12-213ENST00000519553 ETF1P62495 437 aaKnown RBP10.02□□□□□ -0.81
PTPN12-213ENST00000519553 MAP7Q14244 749 aa10.02□□□□□ -0.81
PTPN12-213ENST00000519553 NKD1Q969G9 470 aa10.02□□□□□ -0.81
PTPN12-213ENST00000519553 C1GALT1Q9NS00 363 aa10.02□□□□□ -0.81
PTPN12-213ENST00000519553 FURINP09958 794 aa10.01□□□□□ -0.81
PTPN12-213ENST00000519553 NKG7Q16617 165 aa10.01□□□□□ -0.81
PTPN12-213ENST00000519553 ZNF507Q8TCN5 953 aa10.01□□□□□ -0.81
PTPN12-213ENST00000519553 LGR6Q9HBX8 967 aa10.01□□□□□ -0.81
PTPN12-213ENST00000519553 PCOLCE2Q9UKZ9 415 aa10.01□□□□□ -0.81
PTPN12-213ENST00000519553 INPP5FQ9Y2H2 1132 aa10.01□□□□□ -0.81
PTPN12-213ENST00000519553 HTR3BO95264 441 aa10□□□□□ -0.81
PTPN12-213ENST00000519553 PGRP06401 933 aa10□□□□□ -0.81
PTPN12-213ENST00000519553 NFKBIBQ15653 356 aa10□□□□□ -0.81
PTPN12-213ENST00000519553 PAOXQ6QHF9 649 aa10□□□□□ -0.81
PTPN12-213ENST00000519553 GATA6Q92908 595 aa10□□□□□ -0.81
PTPN12-213ENST00000519553 PRKAG2Q9UGJ0 569 aa10□□□□□ -0.81
PTPN12-213ENST00000519553 ADAM30Q9UKF2 790 aa10□□□□□ -0.81
PTPN12-213ENST00000519553 CAP2P40123 477 aa9.99□□□□□ -0.81
PTPN12-213ENST00000519553 PDE4BQ07343 736 aa9.99□□□□□ -0.81
PTPN12-213ENST00000519553 SLBPQ14493 270 aaKnown RBP eCLIP9.99□□□□□ -0.81
PTPN12-213ENST00000519553 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.99□□□□□ -0.81
PTPN12-213ENST00000519553 REXO1Q8N1G1 1221 aaKnown RBP9.99□□□□□ -0.81
PTPN12-213ENST00000519553 ACSF2Q96CM8 615 aaPredicted RBP9.99□□□□□ -0.81
PTPN12-213ENST00000519553 PSMG3-AS1Q96PY0 264 aa9.99□□□□□ -0.81
PTPN12-213ENST00000519553 TJP2Q9UDY2 1190 aa9.99□□□□□ -0.81
PTPN12-213ENST00000519553 PCDHB14Q9Y5E9 798 aa9.99□□□□□ -0.81
PTPN12-213ENST00000519553 ATE1O95260 518 aa9.98□□□□□ -0.81
PTPN12-213ENST00000519553 CLCQ05315 142 aa9.98□□□□□ -0.81
PTPN12-213ENST00000519553 TMEM201Q5SNT2 666 aa9.98□□□□□ -0.81
PTPN12-213ENST00000519553 RNF43Q68DV7 783 aa9.98□□□□□ -0.81
PTPN12-213ENST00000519553 HID1Q8IV36 788 aa9.98□□□□□ -0.81
PTPN12-213ENST00000519553 MRPL41Q8IXM3 137 aaKnown RBP9.98□□□□□ -0.81
PTPN12-213ENST00000519553 KCT2Q8NC54 265 aa9.98□□□□□ -0.81
PTPN12-213ENST00000519553 EHMT1Q9H9B1 1298 aa9.98□□□□□ -0.81
PTPN12-213ENST00000519553 SSU72Q9NP77 194 aaKnown RBP9.98□□□□□ -0.81
PTPN12-213ENST00000519553 GINM1Q9NU53 330 aa9.98□□□□□ -0.81
PTPN12-213ENST00000519553 REV1Q9UBZ9 1251 aa9.98□□□□□ -0.81
PTPN12-213ENST00000519553 DNAJA2O60884 412 aa9.97□□□□□ -0.81
PTPN12-213ENST00000519553 PLCG1P19174 1290 aa9.97□□□□□ -0.81
PTPN12-213ENST00000519553 FSTP19883 344 aa9.97□□□□□ -0.81
PTPN12-213ENST00000519553 ADMP35318 185 aa9.97□□□□□ -0.81
PTPN12-213ENST00000519553 NFIAQ12857 509 aa9.97□□□□□ -0.81
PTPN12-213ENST00000519553 CDK5R2Q13319 367 aa9.97□□□□□ -0.81
PTPN12-213ENST00000519553 CDC37L1Q7L3B6 337 aa9.97□□□□□ -0.81
PTPN12-213ENST00000519553 SHISA5Q8N114 240 aa9.97□□□□□ -0.81
PTPN12-213ENST00000519553 SPATA32Q96LK8 384 aa9.97□□□□□ -0.81
PTPN12-213ENST00000519553 CAPN10Q9HC96 672 aa9.97□□□□□ -0.81
PTPN12-213ENST00000519553 ITGB7P26010 798 aa9.96□□□□□ -0.82
PTPN12-213ENST00000519553 MCM4P33991 863 aa9.96□□□□□ -0.82
PTPN12-213ENST00000519553 SOX9P48436 509 aa9.96□□□□□ -0.82
PTPN12-213ENST00000519553 ZNF165P49910 485 aa9.96□□□□□ -0.82
PTPN12-213ENST00000519553 ZC3H6P61129 1189 aaKnown RBP9.96□□□□□ -0.82
PTPN12-213ENST00000519553 GK5Q6ZS86 529 aa9.96□□□□□ -0.82
PTPN12-213ENST00000519553 ARMCX6Q7L4S7 300 aa9.96□□□□□ -0.82
PTPN12-213ENST00000519553 TMEM87BQ96K49 555 aa9.96□□□□□ -0.82
PTPN12-213ENST00000519553 EFR3BQ9Y2G0 817 aa9.96□□□□□ -0.82
PTPN12-213ENST00000519553 LOC100996750A0A140TA64 210 aa9.95□□□□□ -0.82
PTPN12-213ENST00000519553 ZAR1Q86SH2 424 aa9.95□□□□□ -0.82
PTPN12-213ENST00000519553 MCATQ8IVS2 390 aaKnown RBP9.95□□□□□ -0.82
PTPN12-213ENST00000519553 MFSD14AQ96MC6 490 aa9.95□□□□□ -0.82
PTPN12-213ENST00000519553 DBNDD2Q9BQY9 259 aa9.95□□□□□ -0.82
PTPN12-213ENST00000519553 KRTAP4-6Q9BYQ5 205 aa9.95□□□□□ -0.82
PTPN12-213ENST00000519553 LRIG2O94898 1065 aa9.94□□□□□ -0.82
PTPN12-213ENST00000519553 IGLV1-40P01703 118 aa9.94□□□□□ -0.82
PTPN12-213ENST00000519553 COL9A2Q14055 689 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms