RNA–Protein interactions for RNA: ENST00000518587.1

NPM1-205, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 670 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-205ENST00000518587 FKBP5Q13451 457 aaPredicted RBP8.22□□□□□ -1.09
NPM1-205ENST00000518587 LBRQ14739 615 aaKnown RBP8.22□□□□□ -1.09
NPM1-205ENST00000518587 CCDC93Q567U6 631 aa8.22□□□□□ -1.09
NPM1-205ENST00000518587 PRR5LQ6MZQ0 368 aa8.22□□□□□ -1.09
NPM1-205ENST00000518587 NBPF5PQ86XG9 351 aaPredicted RBP8.22□□□□□ -1.09
NPM1-205ENST00000518587 ALDH16A1Q8IZ83 802 aa8.22□□□□□ -1.09
NPM1-205ENST00000518587 RTKN2Q8IZC4 609 aa8.22□□□□□ -1.09
NPM1-205ENST00000518587 ZNF622Q969S3 477 aaKnown RBP eCLIP8.22□□□□□ -1.097e-36■□□□□ 9.1
NPM1-205ENST00000518587 GTPBP3Q969Y2 492 aaKnown RBP8.22□□□□□ -1.09
NPM1-205ENST00000518587 BABAM1Q9NWV8 329 aa8.22□□□□□ -1.09
NPM1-205ENST00000518587 CXXC1Q9P0U4 656 aaPredicted RBP8.22□□□□□ -1.09
NPM1-205ENST00000518587 MTMR7Q9Y216 660 aa8.22□□□□□ -1.09
NPM1-205ENST00000518587 DICER1Q9UPY3 1922 aaKnown RBP8.22□□□□□ -1.09
NPM1-205ENST00000518587 BCORQ6W2J9 1755 aa8.22□□□□□ -1.09
NPM1-205ENST00000518587 IBTKQ9P2D0 1353 aaPredicted RBP8.22□□□□□ -1.09
NPM1-205ENST00000518587 ERVV-1B6SEH8 477 aa8.21□□□□□ -1.1
NPM1-205ENST00000518587 CAMTA2O94983 1202 aa8.21□□□□□ -1.1
NPM1-205ENST00000518587 SRGNP10124 158 aa8.21□□□□□ -1.1
NPM1-205ENST00000518587 LMOD3Q0VAK6 560 aa8.21□□□□□ -1.1
NPM1-205ENST00000518587 TAF7Q15545 349 aaPredicted RBP8.21□□□□□ -1.1
NPM1-205ENST00000518587 EFHC2Q5JST6 749 aa8.21□□□□□ -1.1
NPM1-205ENST00000518587 TBC1D9BQ66K14 1250 aa8.21□□□□□ -1.1
NPM1-205ENST00000518587 RRAGCQ9HB90 399 aa8.21□□□□□ -1.1
NPM1-205ENST00000518587 RNF123Q5XPI4 1314 aa8.21□□□□□ -1.1
NPM1-205ENST00000518587 RIC1Q4ADV7 1423 aa8.2□□□□□ -1.1
NPM1-205ENST00000518587 TIAM2Q8IVF5 1701 aa8.2□□□□□ -1.1
NPM1-205ENST00000518587 FER1L6Q2WGJ9 1857 aa8.2□□□□□ -1.1
NPM1-205ENST00000518587 KLRG2A4D1S0 409 aaPredicted RBP8.2□□□□□ -1.1
NPM1-205ENST00000518587 GPR25O00155 361 aa8.2□□□□□ -1.1
NPM1-205ENST00000518587 ATP2B4P23634 1241 aa8.2□□□□□ -1.1
NPM1-205ENST00000518587 PPP2R1AP30153 589 aa8.2□□□□□ -1.1
NPM1-205ENST00000518587 GMPRP36959 345 aa8.2□□□□□ -1.1
NPM1-205ENST00000518587 BICDL1Q6ZP65 573 aa8.2□□□□□ -1.1
NPM1-205ENST00000518587 NLRP8Q86W28 1048 aa8.2□□□□□ -1.1
NPM1-205ENST00000518587 DNAJC5GQ8N7S2 189 aa8.2□□□□□ -1.1
NPM1-205ENST00000518587 RETREG2Q8NC44 543 aa8.2□□□□□ -1.1
NPM1-205ENST00000518587 CHMP4AQ9BY43 222 aa8.2□□□□□ -1.1
NPM1-205ENST00000518587 TMX4Q9H1E5 349 aaPredicted RBP8.2□□□□□ -1.1
NPM1-205ENST00000518587 MAPK8IP3Q9UPT6 1336 aa8.2□□□□□ -1.1
NPM1-205ENST00000518587 LAMB4A4D0S4 1761 aa8.2□□□□□ -1.1
NPM1-205ENST00000518587 NFKBIEO00221 500 aa8.19□□□□□ -1.1
NPM1-205ENST00000518587 A1BGP04217 495 aa8.19□□□□□ -1.1
NPM1-205ENST00000518587 TMCO4Q5TGY1 634 aa8.19□□□□□ -1.1
NPM1-205ENST00000518587 PRPF40BQ6NWY9 871 aaKnown RBP8.19□□□□□ -1.1
NPM1-205ENST00000518587 KIF6Q6ZMV9 814 aa8.19□□□□□ -1.1
NPM1-205ENST00000518587 CAPN12Q6ZSI9 719 aa8.19□□□□□ -1.1
NPM1-205ENST00000518587 PNMA8AQ86V59 439 aaPredicted RBP8.19□□□□□ -1.1
NPM1-205ENST00000518587 RHPN1Q8TCX5 695 aa8.19□□□□□ -1.1
NPM1-205ENST00000518587 ZCCHC2Q9C0B9 1178 aaKnown RBP8.19□□□□□ -1.1
NPM1-205ENST00000518587 VPS33BQ9H267 617 aa8.19□□□□□ -1.1
NPM1-205ENST00000518587 USTQ9Y2C2 406 aa8.19□□□□□ -1.1
NPM1-205ENST00000518587 GPC6Q9Y625 555 aaPredicted RBP8.19□□□□□ -1.1
NPM1-205ENST00000518587 SCN4AP35499 1836 aa8.19□□□□□ -1.1
NPM1-205ENST00000518587 ANKRD31Q8N7Z5 1873 aa8.18□□□□□ -1.1
NPM1-205ENST00000518587 FKBP4Q02790 459 aaKnown RBP eCLIP8.18□□□□□ -1.13e-6■■□□□ 11.6
NPM1-205ENST00000518587 RASSF7Q02833 373 aa8.18□□□□□ -1.1
NPM1-205ENST00000518587 PARP10Q53GL7 1025 aa8.18□□□□□ -1.1
NPM1-205ENST00000518587 RNFT1Q5M7Z0 435 aa8.18□□□□□ -1.1
NPM1-205ENST00000518587 FOXR1Q6PIV2 292 aa8.18□□□□□ -1.1
NPM1-205ENST00000518587 LRRC69Q6ZNQ3 347 aa8.18□□□□□ -1.1
NPM1-205ENST00000518587 LDHDQ86WU2 507 aa8.18□□□□□ -1.1
NPM1-205ENST00000518587 VTI1AQ96AJ9 217 aa8.18□□□□□ -1.1
NPM1-205ENST00000518587 COL25A1Q9BXS0 654 aaPredicted RBP8.18□□□□□ -1.1
NPM1-205ENST00000518587 NIP7Q9Y221 180 aaKnown RBP eCLIP8.18□□□□□ -1.1
NPM1-205ENST00000518587 USP16Q9Y5T5 823 aa8.18□□□□□ -1.1
NPM1-205ENST00000518587 RBM25P49756 843 aaKnown RBP8.17□□□□□ -1.1
NPM1-205ENST00000518587 KRT76Q01546 638 aa8.17□□□□□ -1.1
NPM1-205ENST00000518587 GAS6Q14393 721 aa8.17□□□□□ -1.1
NPM1-205ENST00000518587 RALBP1Q15311 655 aa8.17□□□□□ -1.1
NPM1-205ENST00000518587 RTN1Q16799 776 aa8.17□□□□□ -1.1
NPM1-205ENST00000518587 HSP90AB3PQ58FF7 597 aa8.17□□□□□ -1.1
NPM1-205ENST00000518587 PPP1R42Q7Z4L9 355 aa8.17□□□□□ -1.1
NPM1-205ENST00000518587 JDP2Q8WYK2 163 aa8.17□□□□□ -1.1
NPM1-205ENST00000518587 PHACTR3Q96KR7 559 aa8.17□□□□□ -1.1
NPM1-205ENST00000518587 PSMD1Q99460 953 aa8.17□□□□□ -1.1
NPM1-205ENST00000518587 MKNK1Q9BUB5 465 aa8.17□□□□□ -1.1
NPM1-205ENST00000518587 NDFIP2Q9NV92 336 aa8.17□□□□□ -1.1
NPM1-205ENST00000518587 CEP350Q5VT06 3117 aa8.17□□□□□ -1.1
NPM1-205ENST00000518587 CCDC88AQ3V6T2 1871 aa8.17□□□□□ -1.1
NPM1-205ENST00000518587 BNIP3LO60238 219 aa8.16□□□□□ -1.1
NPM1-205ENST00000518587 COL11A2P13942 1736 aaPredicted RBP8.16□□□□□ -1.1
NPM1-205ENST00000518587 SCNN1AP37088 669 aa8.16□□□□□ -1.1
NPM1-205ENST00000518587 NFE2L2Q16236 605 aa8.16□□□□□ -1.1
NPM1-205ENST00000518587 CRY2Q49AN0 593 aa8.16□□□□□ -1.1
NPM1-205ENST00000518587 PHLDB3Q6NSJ2 640 aa8.16□□□□□ -1.1
NPM1-205ENST00000518587 FIGNL1Q6PIW4 674 aa8.16□□□□□ -1.1
NPM1-205ENST00000518587 MAP3K15Q6ZN16 1313 aa8.16□□□□□ -1.1
NPM1-205ENST00000518587 MCM10Q7L590 875 aa8.16□□□□□ -1.1
NPM1-205ENST00000518587 TMC4Q7Z404 712 aa8.16□□□□□ -1.1
NPM1-205ENST00000518587 ZNF280CQ8ND82 737 aa8.16□□□□□ -1.1
NPM1-205ENST00000518587 SUPT20HQ8NEM7 779 aa8.16□□□□□ -1.1
NPM1-205ENST00000518587 COL26A1Q96A83 441 aa8.16□□□□□ -1.1
NPM1-205ENST00000518587 HSH2DQ96JZ2 352 aa8.16□□□□□ -1.1
NPM1-205ENST00000518587 SUSD3Q96L08 255 aa8.16□□□□□ -1.1
NPM1-205ENST00000518587 TRERF1Q96PN7 1200 aa8.16□□□□□ -1.1
NPM1-205ENST00000518587 CFHR5Q9BXR6 569 aa8.16□□□□□ -1.1
NPM1-205ENST00000518587 NEUROD4Q9HD90 331 aa8.16□□□□□ -1.1
NPM1-205ENST00000518587 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.16□□□□□ -1.15e-11■■■■■ 93.2
NPM1-205ENST00000518587 PCDHGC4Q9Y5F7 938 aa8.16□□□□□ -1.1
NPM1-205ENST00000518587 GJA3Q9Y6H8 435 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms