RNA–Protein interactions for RNA: ENST00000517880.1

CPEB4-203, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-203ENST00000517880 DCP1AQ9NPI6 582 aaPredicted RBP12.53□□□□□ -0.4
CPEB4-203ENST00000517880 LRRC37AA6NMS7 1700 aa12.52□□□□□ -0.41
CPEB4-203ENST00000517880 FAM205AQ6ZU69 1335 aa12.52□□□□□ -0.41
CPEB4-203ENST00000517880 USP17L12C9JPN9 530 aa12.52□□□□□ -0.41
CPEB4-203ENST00000517880 USP17L21D6R901 530 aa12.52□□□□□ -0.41
CPEB4-203ENST00000517880 CALM1P0DP23 149 aa12.52□□□□□ -0.41
CPEB4-203ENST00000517880 CALM2P0DP24 149 aa12.52□□□□□ -0.41
CPEB4-203ENST00000517880 CALM3P0DP25 149 aa12.52□□□□□ -0.41
CPEB4-203ENST00000517880 SRGNP10124 158 aa12.52□□□□□ -0.41
CPEB4-203ENST00000517880 IFNAR1P17181 557 aa12.52□□□□□ -0.41
CPEB4-203ENST00000517880 PDE4BQ07343 736 aa12.52□□□□□ -0.41
CPEB4-203ENST00000517880 SSRP1Q08945 709 aaKnown RBP12.52□□□□□ -0.41
CPEB4-203ENST00000517880 MASTLQ96GX5 879 aa12.52□□□□□ -0.41
CPEB4-203ENST00000517880 COA1Q9GZY4 146 aa12.52□□□□□ -0.41
CPEB4-203ENST00000517880 TSPY26PQ9H489 355 aa12.52□□□□□ -0.41
CPEB4-203ENST00000517880 AATFQ9NY61 560 aaKnown RBP eCLIP12.52□□□□□ -0.41
CPEB4-203ENST00000517880 TFIP11Q9UBB9 837 aaKnown RBP12.52□□□□□ -0.41
CPEB4-203ENST00000517880 TACC3Q9Y6A5 838 aa12.52□□□□□ -0.41
CPEB4-203ENST00000517880 SYCE3A1L190 88 aa12.51□□□□□ -0.41
CPEB4-203ENST00000517880 C6orf229H3BNL8 230 aa12.51□□□□□ -0.41
CPEB4-203ENST00000517880 DTNBO60941 627 aa12.51□□□□□ -0.41
CPEB4-203ENST00000517880 ADD1P35611 737 aaKnown RBP12.51□□□□□ -0.41
CPEB4-203ENST00000517880 NASPP49321 788 aaPredicted RBP12.51□□□□□ -0.41
CPEB4-203ENST00000517880 TRIM29Q14134 588 aa12.51□□□□□ -0.41
CPEB4-203ENST00000517880 SEC23AQ15436 765 aa12.51□□□□□ -0.41
CPEB4-203ENST00000517880 NTRK3Q16288 839 aa12.51□□□□□ -0.41
CPEB4-203ENST00000517880 TRIM22Q8IYM9 498 aa12.51□□□□□ -0.41
CPEB4-203ENST00000517880 ZSCAN10Q96SZ4 725 aaPredicted RBP12.51□□□□□ -0.41
CPEB4-203ENST00000517880 INCENPQ9NQS7 918 aa12.51□□□□□ -0.41
CPEB4-203ENST00000517880 DDX19AQ9NUU7 478 aaKnown RBP12.51□□□□□ -0.41
CPEB4-203ENST00000517880 MROH7-TTC4A0A0A0MT08 1334 aa12.5□□□□□ -0.41
CPEB4-203ENST00000517880 FMNL1O95466 1100 aaPredicted RBP12.5□□□□□ -0.41
CPEB4-203ENST00000517880 RTN1Q16799 776 aa12.5□□□□□ -0.41
CPEB4-203ENST00000517880 MICU3Q86XE3 530 aa12.5□□□□□ -0.41
CPEB4-203ENST00000517880 FANCBQ8NB91 859 aa12.5□□□□□ -0.41
CPEB4-203ENST00000517880 ALG1Q9BT22 464 aa12.5□□□□□ -0.41
CPEB4-203ENST00000517880 ZNF287Q9HBT7 754 aa12.5□□□□□ -0.41
CPEB4-203ENST00000517880 FAM217BQ9NTX9 383 aaPredicted RBP12.5□□□□□ -0.41
CPEB4-203ENST00000517880 RBM28Q9NW13 759 aaKnown RBP12.5□□□□□ -0.41
CPEB4-203ENST00000517880 RTEL1Q9NZ71 1219 aa12.5□□□□□ -0.41
CPEB4-203ENST00000517880 POLLQ9UGP5 575 aa12.5□□□□□ -0.41
CPEB4-203ENST00000517880 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.5□□□□□ -0.41
CPEB4-203ENST00000517880 MYH15Q9Y2K3 1946 aa12.49□□□□□ -0.41
CPEB4-203ENST00000517880 GPR75-ASB3A0A0A6YYF3 556 aa12.49□□□□□ -0.41
CPEB4-203ENST00000517880 RANBP6O60518 1105 aaKnown RBP12.49□□□□□ -0.41
CPEB4-203ENST00000517880 MMP10P09238 476 aa12.49□□□□□ -0.41
CPEB4-203ENST00000517880 CDC27P30260 824 aa12.49□□□□□ -0.41
CPEB4-203ENST00000517880 USP5P45974 858 aa12.49□□□□□ -0.41
CPEB4-203ENST00000517880 UVSSAQ2YD98 709 aa12.49□□□□□ -0.41
CPEB4-203ENST00000517880 C12orf60Q5U649 245 aa12.49□□□□□ -0.41
CPEB4-203ENST00000517880 FAM173BQ6P4H8 233 aa12.49□□□□□ -0.41
CPEB4-203ENST00000517880 CATIPQ7Z7H3 387 aa12.49□□□□□ -0.41
CPEB4-203ENST00000517880 ZNF654Q8IZM8 581 aa12.49□□□□□ -0.41
CPEB4-203ENST00000517880 MPNDQ8N594 471 aa12.49□□□□□ -0.41
CPEB4-203ENST00000517880 NKX2-3Q8TAU0 364 aa12.49□□□□□ -0.41
CPEB4-203ENST00000517880 EYA3Q99504 573 aa12.49□□□□□ -0.41
CPEB4-203ENST00000517880 ZC3H12CQ9C0D7 883 aaKnown RBP12.49□□□□□ -0.41
CPEB4-203ENST00000517880 MKRN1Q9UHC7 482 aaKnown RBP12.49□□□□□ -0.41
CPEB4-203ENST00000517880 ANKRD31Q8N7Z5 1873 aa12.48□□□□□ -0.41
CPEB4-203ENST00000517880 TNKSO95271 1327 aa12.48□□□□□ -0.41
CPEB4-203ENST00000517880 DDAH1O94760 285 aa12.48□□□□□ -0.41
CPEB4-203ENST00000517880 DEXIO95424 95 aa12.48□□□□□ -0.41
CPEB4-203ENST00000517880 YEATS4O95619 227 aa12.48□□□□□ -0.41
CPEB4-203ENST00000517880 CCDC173Q0VFZ6 552 aa12.48□□□□□ -0.41
CPEB4-203ENST00000517880 IFIT1BQ5T764 474 aaKnown RBP12.48□□□□□ -0.41
CPEB4-203ENST00000517880 STYK1Q6J9G0 422 aa12.48□□□□□ -0.41
CPEB4-203ENST00000517880 RBSNQ9H1K0 784 aa12.48□□□□□ -0.41
CPEB4-203ENST00000517880 SENP2Q9HC62 589 aa12.48□□□□□ -0.41
CPEB4-203ENST00000517880 POLR3EQ9NVU0 708 aa12.48□□□□□ -0.41
CPEB4-203ENST00000517880 LTBP1Q14766 1721 aa12.48□□□□□ -0.41
CPEB4-203ENST00000517880 TNS1Q9HBL0 1735 aaKnown RBP12.48□□□□□ -0.41
CPEB4-203ENST00000517880 LAMB1P07942 1786 aa12.47□□□□□ -0.41
CPEB4-203ENST00000517880 SAFBQ15424 915 aaKnown RBP eCLIP12.47□□□□□ -0.41
CPEB4-203ENST00000517880 CRACR2BQ8N4Y2 399 aaPredicted RBP12.47□□□□□ -0.41
CPEB4-203ENST00000517880 KCNG4Q8TDN1 519 aa12.47□□□□□ -0.41
CPEB4-203ENST00000517880 ANKS1AQ92625 1134 aa12.47□□□□□ -0.41
CPEB4-203ENST00000517880 MAP3K14Q99558 947 aa12.47□□□□□ -0.41
CPEB4-203ENST00000517880 ZKSCAN3Q9BRR0 538 aa12.47□□□□□ -0.41
CPEB4-203ENST00000517880 RNF26Q9BY78 433 aaPredicted RBP12.47□□□□□ -0.41
CPEB4-203ENST00000517880 TCP11L1Q9NUJ3 509 aa12.47□□□□□ -0.41
CPEB4-203ENST00000517880 MCM9Q9NXL9 1143 aa12.47□□□□□ -0.41
CPEB4-203ENST00000517880 STK32BQ9NY57 414 aa12.47□□□□□ -0.41
CPEB4-203ENST00000517880 ROBO3Q96MS0 1386 aa12.47□□□□□ -0.41
CPEB4-203ENST00000517880 BAZ2AQ9UIF9 1905 aaKnown RBP12.47□□□□□ -0.41
CPEB4-203ENST00000517880 DLEC1Q9Y238 1755 aa12.47□□□□□ -0.41
CPEB4-203ENST00000517880 GAKO14976 1311 aa12.47□□□□□ -0.41
CPEB4-203ENST00000517880 H0YIN7 160 aa12.46□□□□□ -0.41
CPEB4-203ENST00000517880 CTAGE5O15320 804 aa12.46□□□□□ -0.41
CPEB4-203ENST00000517880 XBP1P17861 261 aa12.46□□□□□ -0.41
CPEB4-203ENST00000517880 U2AF2P26368 475 aaKnown RBP eCLIP12.46□□□□□ -0.413e-6■■■■□ 26.2
CPEB4-203ENST00000517880 AKAP17AQ02040 695 aaKnown RBP12.46□□□□□ -0.41
CPEB4-203ENST00000517880 GUCY1B3Q02153 619 aa12.46□□□□□ -0.41
CPEB4-203ENST00000517880 KIF23Q02241 960 aaPredicted RBP12.46□□□□□ -0.41
CPEB4-203ENST00000517880 SLC15A2Q16348 729 aa12.46□□□□□ -0.41
CPEB4-203ENST00000517880 MFSD14BQ5SR56 506 aa12.46□□□□□ -0.41
CPEB4-203ENST00000517880 MYSM1Q5VVJ2 828 aa12.46□□□□□ -0.41
CPEB4-203ENST00000517880 KRT40Q6A162 431 aa12.46□□□□□ -0.41
CPEB4-203ENST00000517880 DPP8Q6V1X1 898 aaPredicted RBP12.46□□□□□ -0.41
CPEB4-203ENST00000517880 DGKHQ86XP1 1220 aa12.46□□□□□ -0.41
CPEB4-203ENST00000517880 RAB11FIP4Q86YS3 637 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms