RNA–Protein interactions for RNA: ENST00000517484.5

EFCAB13-203, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EFCAB13, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-203ENST00000517484 SHROOM1Q2M3G4 852 aaPredicted RBP11.36□□□□□ -0.59
EFCAB13-203ENST00000517484 NSUN7Q8NE18 718 aaKnown RBP11.36□□□□□ -0.59
EFCAB13-203ENST00000517484 ATP6V1DQ9Y5K8 247 aa11.36□□□□□ -0.59
EFCAB13-203ENST00000517484 BRD1O95696 1058 aa11.36□□□□□ -0.59
EFCAB13-203ENST00000517484 SSRP1Q08945 709 aaKnown RBP11.36□□□□□ -0.59
EFCAB13-203ENST00000517484 DALRD3Q5D0E6 543 aaKnown RBP11.36□□□□□ -0.59
EFCAB13-203ENST00000517484 ZNF654Q8IZM8 581 aa11.36□□□□□ -0.59
EFCAB13-203ENST00000517484 COA1Q9GZY4 146 aa11.36□□□□□ -0.59
EFCAB13-203ENST00000517484 AK9Q5TCS8 1911 aa11.36□□□□□ -0.59
EFCAB13-203ENST00000517484 KRT85P78386 507 aa11.36□□□□□ -0.59
EFCAB13-203ENST00000517484 EXOSC10Q01780 885 aaKnown RBP11.36□□□□□ -0.59
EFCAB13-203ENST00000517484 STK38Q15208 465 aa11.36□□□□□ -0.59
EFCAB13-203ENST00000517484 TBC1D10BQ4KMP7 808 aaPredicted RBP11.36□□□□□ -0.59
EFCAB13-203ENST00000517484 NIM1KQ8IY84 436 aa11.36□□□□□ -0.59
EFCAB13-203ENST00000517484 NLGN2Q8NFZ4 835 aa11.36□□□□□ -0.59
EFCAB13-203ENST00000517484 INTS4Q96HW7 963 aaKnown RBP11.36□□□□□ -0.59
EFCAB13-203ENST00000517484 CLIP2Q9UDT6 1046 aa11.36□□□□□ -0.59
EFCAB13-203ENST00000517484 PLEKHA8P1O95397 391 aa11.35□□□□□ -0.59
EFCAB13-203ENST00000517484 CRKP46108 304 aa11.35□□□□□ -0.59
EFCAB13-203ENST00000517484 SNAP25P60880 206 aa11.35□□□□□ -0.59
EFCAB13-203ENST00000517484 CNNM2Q9H8M5 875 aa11.35□□□□□ -0.59
EFCAB13-203ENST00000517484 BTAF1O14981 1849 aa11.35□□□□□ -0.59
EFCAB13-203ENST00000517484 NRAPQ86VF7 1730 aa11.35□□□□□ -0.59
EFCAB13-203ENST00000517484 GIMAP6Q6P9H5 292 aa11.35□□□□□ -0.59
EFCAB13-203ENST00000517484 TRMT1LQ7Z2T5 733 aaKnown RBP11.35□□□□□ -0.59
EFCAB13-203ENST00000517484 GPKOWQ92917 476 aaPredicted RBP eCLIP11.35□□□□□ -0.59
EFCAB13-203ENST00000517484 ZNF512BQ96KM6 892 aaPredicted RBP11.35□□□□□ -0.59
EFCAB13-203ENST00000517484 ZSCAN10Q96SZ4 725 aaPredicted RBP11.35□□□□□ -0.59
EFCAB13-203ENST00000517484 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.35□□□□□ -0.59
EFCAB13-203ENST00000517484 NUP98P52948 1817 aa11.35□□□□□ -0.59
EFCAB13-203ENST00000517484 ADAMTS7Q9UKP4 1686 aa11.35□□□□□ -0.59
EFCAB13-203ENST00000517484 HOXA10P31260 410 aaPredicted RBP11.34□□□□□ -0.59
EFCAB13-203ENST00000517484 USP17L2Q6R6M4 530 aa11.34□□□□□ -0.59
EFCAB13-203ENST00000517484 PDILTQ8N807 584 aa11.34□□□□□ -0.59
EFCAB13-203ENST00000517484 ENAHQ8N8S7 591 aaPredicted RBP11.34□□□□□ -0.59
EFCAB13-203ENST00000517484 TMOD2Q9NZR1 351 aa11.34□□□□□ -0.59
EFCAB13-203ENST00000517484 COL4A1P02462 1669 aa11.34□□□□□ -0.59
EFCAB13-203ENST00000517484 CTDNEP1O95476 244 aa11.34□□□□□ -0.59
EFCAB13-203ENST00000517484 SLC16A2P36021 539 aa11.34□□□□□ -0.59
EFCAB13-203ENST00000517484 DLGAP5Q15398 846 aa11.34□□□□□ -0.59
EFCAB13-203ENST00000517484 SAFBQ15424 915 aaKnown RBP eCLIP11.34□□□□□ -0.59
EFCAB13-203ENST00000517484 CCDC93Q567U6 631 aa11.34□□□□□ -0.59
EFCAB13-203ENST00000517484 SLF2Q8IX21 1173 aa11.34□□□□□ -0.59
EFCAB13-203ENST00000517484 PSMD14O00487 310 aa11.34□□□□□ -0.59
EFCAB13-203ENST00000517484 SH2B2O14492 632 aaPredicted RBP11.34□□□□□ -0.59
EFCAB13-203ENST00000517484 PFKFB2O60825 505 aa11.34□□□□□ -0.59
EFCAB13-203ENST00000517484 CFAP100Q494V2 611 aa11.34□□□□□ -0.59
EFCAB13-203ENST00000517484 HEATR3Q7Z4Q2 680 aa11.34□□□□□ -0.59
EFCAB13-203ENST00000517484 RASSF8Q8NHQ8 419 aa11.34□□□□□ -0.59
EFCAB13-203ENST00000517484 TBC1D22AQ8WUA7 517 aa11.34□□□□□ -0.59
EFCAB13-203ENST00000517484 PRMT6Q96LA8 375 aaPredicted RBP11.34□□□□□ -0.59
EFCAB13-203ENST00000517484 SAMD7Q7Z3H4 446 aa11.33□□□□□ -0.6
EFCAB13-203ENST00000517484 CREBRFQ8IUR6 639 aa11.33□□□□□ -0.6
EFCAB13-203ENST00000517484 FANCBQ8NB91 859 aa11.33□□□□□ -0.6
EFCAB13-203ENST00000517484 RASGRP4Q8TDF6 673 aa11.33□□□□□ -0.6
EFCAB13-203ENST00000517484 DDX4Q9NQI0 724 aaKnown RBP11.33□□□□□ -0.6
EFCAB13-203ENST00000517484 BTBD18B2RXH4 712 aa11.33□□□□□ -0.6
EFCAB13-203ENST00000517484 SEMA3EO15041 775 aa11.33□□□□□ -0.6
EFCAB13-203ENST00000517484 NR5A1Q13285 461 aa11.33□□□□□ -0.6
EFCAB13-203ENST00000517484 LY9Q9HBG7 655 aa11.33□□□□□ -0.6
EFCAB13-203ENST00000517484 LMBRD1Q9NUN5 540 aa11.33□□□□□ -0.6
EFCAB13-203ENST00000517484 MROH7-TTC4A0A0A0MT08 1334 aa11.33□□□□□ -0.6
EFCAB13-203ENST00000517484 COL1A1P02452 1464 aaPredicted RBP11.33□□□□□ -0.6
EFCAB13-203ENST00000517484 CDK8P49336 464 aa11.33□□□□□ -0.6
EFCAB13-203ENST00000517484 CDC42EP5Q6NZY7 148 aa11.33□□□□□ -0.6
EFCAB13-203ENST00000517484 DLK2Q6UY11 383 aa11.33□□□□□ -0.6
EFCAB13-203ENST00000517484 IGDCC4Q8TDY8 1250 aa11.33□□□□□ -0.6
EFCAB13-203ENST00000517484 HLA-DOAP06340 250 aa11.32□□□□□ -0.6
EFCAB13-203ENST00000517484 VEGFAP15692 232 aaPredicted RBP11.32□□□□□ -0.6
EFCAB13-203ENST00000517484 NLRP5P59047 1200 aa11.32□□□□□ -0.6
EFCAB13-203ENST00000517484 STAG2Q8N3U4 1231 aa11.32□□□□□ -0.6
EFCAB13-203ENST00000517484 PNMA1Q8ND90 353 aa11.32□□□□□ -0.6
EFCAB13-203ENST00000517484 GPT2Q8TD30 523 aa11.32□□□□□ -0.6
EFCAB13-203ENST00000517484 ATP8A2Q9NTI2 1148 aa11.32□□□□□ -0.6
EFCAB13-203ENST00000517484 RPAP1Q9BWH6 1393 aaPredicted RBP11.32□□□□□ -0.6
EFCAB13-203ENST00000517484 HMGN5P82970 282 aaKnown RBP11.32□□□□□ -0.6
EFCAB13-203ENST00000517484 ZNF526Q8TF50 670 aaPredicted RBP11.32□□□□□ -0.6
EFCAB13-203ENST00000517484 SDF4Q9BRK5 362 aa11.32□□□□□ -0.6
EFCAB13-203ENST00000517484 CABP5Q9NP86 173 aa11.32□□□□□ -0.6
EFCAB13-203ENST00000517484 BIN1O00499 593 aa11.32□□□□□ -0.6
EFCAB13-203ENST00000517484 HMGB2P26583 209 aaKnown RBP11.32□□□□□ -0.6
EFCAB13-203ENST00000517484 KRT40Q6A162 431 aa11.32□□□□□ -0.6
EFCAB13-203ENST00000517484 KCTD1Q719H9 257 aa11.32□□□□□ -0.6
EFCAB13-203ENST00000517484 PODNQ7Z5L7 613 aa11.32□□□□□ -0.6
EFCAB13-203ENST00000517484 CDAN1Q8IWY9 1227 aa11.32□□□□□ -0.6
EFCAB13-203ENST00000517484 ANP32BQ92688 251 aaKnown RBP11.32□□□□□ -0.6
EFCAB13-203ENST00000517484 TMEM87BQ96K49 555 aa11.32□□□□□ -0.6
EFCAB13-203ENST00000517484 USP28Q96RU2 1077 aa11.32□□□□□ -0.6
EFCAB13-203ENST00000517484 CSRNP1Q96S65 589 aa11.32□□□□□ -0.6
EFCAB13-203ENST00000517484 TAOK3Q9H2K8 898 aa11.32□□□□□ -0.6
EFCAB13-203ENST00000517484 RTL9Q8NET4 1388 aa11.31□□□□□ -0.6
EFCAB13-203ENST00000517484 TTC6Q86TZ1 520 aa11.31□□□□□ -0.6
EFCAB13-203ENST00000517484 RTFDC1Q9BY42 306 aaPredicted RBP11.31□□□□□ -0.6
EFCAB13-203ENST00000517484 HPS5Q9UPZ3 1129 aa11.31□□□□□ -0.6
EFCAB13-203ENST00000517484 NWD2Q9ULI1 1742 aa11.31□□□□□ -0.6
EFCAB13-203ENST00000517484 FDPSP14324 419 aaKnown RBP11.31□□□□□ -0.6
EFCAB13-203ENST00000517484 NUP88Q99567 741 aaPredicted RBP11.31□□□□□ -0.6
EFCAB13-203ENST00000517484 MRVI1Q9Y6F6 885 aa11.31□□□□□ -0.6
EFCAB13-203ENST00000517484 FLT1P17948 1338 aa11.31□□□□□ -0.6
EFCAB13-203ENST00000517484 A0A1B0GVL5 298 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms