RNA–Protein interactions for RNA: ENST00000516414.1

RNU6-1049P-201, Transcript of RNA, U6 small nuclear 1049, pseudogene, humanhuman

BASIC

Gene RNU6-1049P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1049P-201ENST00000516414 C9IYK1 514 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 NPIPB6E9PJ23 425 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 ETV2O00321 342 aaPredicted RBP0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 PLSCR1O15162 318 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 DHX15O43143 795 aaKnown RBP0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 TBX1O43435 398 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 GAS2O43903 313 aaKnown RBP0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 LZTS3O60299 673 aaPredicted RBP0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 VAMP4O75379 141 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 SMNDC1O75940 238 aaKnown RBP eCLIP0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 B3GALT4O96024 378 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 F13A1P00488 732 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 PF4P02776 101 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 GSTP1P09211 210 aaKnown RBP0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 GARTP22102 1010 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 FBLN1P23142 703 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 ARNTP27540 789 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 GRK4P32298 578 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 SOX18P35713 384 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 TNNI2P48788 182 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 CLCQ05315 142 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 ZP2Q05996 745 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 CYP4F3Q08477 520 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 NOLC1Q14978 699 aaKnown RBP eCLIP0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 PLCL1Q15111 1095 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 KIAA0319Q5VV43 1072 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 PRAMEF13Q5VWM6 474 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 TDRD10Q5VZ19 366 aaKnown RBP0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 FDX2Q6P4F2 183 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 FBXL19Q6PCT2 694 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 FERMT3Q86UX7 667 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 AEBP1Q8IUX7 1158 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 PHF6Q8IWS0 365 aaKnown RBP eCLIP0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 SULF2Q8IWU5 870 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 SMYD4Q8IYR2 804 aaPredicted RBP0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 FAM26EQ8N5C1 309 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 USHBP1Q8N6Y0 703 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 TP53I13Q8NBR0 393 aaPredicted RBP0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 MICAL1Q8TDZ2 1067 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 EZH1Q92800 747 aaPredicted RBP0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 BRF1Q92994 677 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 ACSF2Q96CM8 615 aaPredicted RBP0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 SHISA4Q96DD7 197 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 SPACA7Q96KW9 195 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 NECAB3Q96P71 396 aaPredicted RBP0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 NOX5Q96PH1 765 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 FMNL2Q96PY5 1086 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 KIF2CQ99661 725 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 DUSP9Q99956 384 aaKnown RBP0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 DBNDD2Q9BQY9 259 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 BHLHE41Q9C0J9 482 aaPredicted RBP0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 RNF32Q9H0A6 362 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 DUSP15Q9H1R2 295 aaPredicted RBP0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 CLEC4MQ9H2X3 399 aaPredicted RBP0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 GSX1Q9H4S2 264 aaPredicted RBP0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 RC3H2Q9HBD1 1191 aaKnown RBP0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 GCM1Q9NP62 436 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 SSU72Q9NP77 194 aaKnown RBP0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 GPN3Q9UHW5 284 aaPredicted RBP0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 CTNND2Q9UQB3 1225 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 AMOTL2Q9Y2J4 779 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 LEMD3Q9Y2U8 911 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 RBM19Q9Y4C8 960 aaKnown RBP0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 PCDHGB7Q9Y5F8 929 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 ST14Q9Y5Y6 855 aa0.77□□□□□ -2.29
RNU6-1049P-201ENST00000516414 UNCXA6NJT0 531 aa0.76□□□□□ -2.29
RNU6-1049P-201ENST00000516414 TRIM13O60858 407 aa0.76□□□□□ -2.29
RNU6-1049P-201ENST00000516414 USP2O75604 605 aaPredicted RBP0.76□□□□□ -2.29
RNU6-1049P-201ENST00000516414 UBOX5O94941 541 aa0.76□□□□□ -2.29
RNU6-1049P-201ENST00000516414 TP53P04637 393 aaPredicted RBP0.76□□□□□ -2.29
RNU6-1049P-201ENST00000516414 USP17L7P0C7H9 530 aa0.76□□□□□ -2.29
RNU6-1049P-201ENST00000516414 ACRP10323 421 aa0.76□□□□□ -2.29
RNU6-1049P-201ENST00000516414 BMP7P18075 431 aa0.76□□□□□ -2.29
RNU6-1049P-201ENST00000516414 ITGB5P18084 799 aa0.76□□□□□ -2.29
RNU6-1049P-201ENST00000516414 HOXA5P20719 270 aa0.76□□□□□ -2.29
RNU6-1049P-201ENST00000516414 TGM1P22735 817 aa0.76□□□□□ -2.29
RNU6-1049P-201ENST00000516414 ITPKAP23677 461 aa0.76□□□□□ -2.29
RNU6-1049P-201ENST00000516414 TACR1P25103 407 aa0.76□□□□□ -2.29
RNU6-1049P-201ENST00000516414 MAPK1P28482 360 aa0.76□□□□□ -2.29
RNU6-1049P-201ENST00000516414 CTSKP43235 329 aa0.76□□□□□ -2.29
RNU6-1049P-201ENST00000516414 LIMS1P48059 325 aa0.76□□□□□ -2.29
RNU6-1049P-201ENST00000516414 RACK1P63244 317 aaKnown RBP0.76□□□□□ -2.29
RNU6-1049P-201ENST00000516414 PIP4K2BP78356 416 aa0.76□□□□□ -2.29
RNU6-1049P-201ENST00000516414 PLCB3Q01970 1234 aa0.76□□□□□ -2.29
RNU6-1049P-201ENST00000516414 RTP5Q14D33 572 aa0.76□□□□□ -2.29
RNU6-1049P-201ENST00000516414 SWI5Q1ZZU3 235 aa0.76□□□□□ -2.29
RNU6-1049P-201ENST00000516414 ZNF394Q53GI3 561 aa0.76□□□□□ -2.29
RNU6-1049P-201ENST00000516414 WIPI1Q5MNZ9 446 aaPredicted RBP0.76□□□□□ -2.29
RNU6-1049P-201ENST00000516414 ZBTB37Q5TC79 503 aa0.76□□□□□ -2.29
RNU6-1049P-201ENST00000516414 LCE5AQ5TCM9 118 aa0.76□□□□□ -2.29
RNU6-1049P-201ENST00000516414 PCNX4Q63HM2 1172 aa0.76□□□□□ -2.29
RNU6-1049P-201ENST00000516414 MBLAC2Q68D91 279 aa0.76□□□□□ -2.29
RNU6-1049P-201ENST00000516414 PDE12Q6L8Q7 609 aaKnown RBP0.76□□□□□ -2.29
RNU6-1049P-201ENST00000516414 DTHD1Q6ZMT9 781 aa0.76□□□□□ -2.29
RNU6-1049P-201ENST00000516414 CCDC81Q6ZN84 652 aa0.76□□□□□ -2.29
RNU6-1049P-201ENST00000516414 ATG14Q6ZNE5 492 aa0.76□□□□□ -2.29
RNU6-1049P-201ENST00000516414 SYDE1Q6ZW31 735 aaPredicted RBP0.76□□□□□ -2.29
RNU6-1049P-201ENST00000516414 ARMCX6Q7L4S7 300 aa0.76□□□□□ -2.29
RNU6-1049P-201ENST00000516414 CYFIP1Q7L576 1253 aa0.76□□□□□ -2.29
RNU6-1049P-201ENST00000516414 TTC6Q86TZ1 520 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms